RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 A0A087WZ62 844 aa19.32■□□□□ 0.68
PHGDH-227ENST00000641811 PP2D1A8MPX8 630 aa19.32■□□□□ 0.68
PHGDH-227ENST00000641811 GPR182O15218 404 aa19.32■□□□□ 0.68
PHGDH-227ENST00000641811 DARSP14868 501 aaKnown RBP19.32■□□□□ 0.68
PHGDH-227ENST00000641811 EIF4BP23588 611 aaKnown RBP19.32■□□□□ 0.68
PHGDH-227ENST00000641811 ECM1Q16610 540 aa19.32■□□□□ 0.68
PHGDH-227ENST00000641811 HSCBQ8IWL3 235 aa19.32■□□□□ 0.68
PHGDH-227ENST00000641811 ERMNQ8TAM6 284 aa19.32■□□□□ 0.68
PHGDH-227ENST00000641811 PRPF31Q8WWY3 499 aaKnown RBP19.32■□□□□ 0.68
PHGDH-227ENST00000641811 FDXACB1Q9BRP7 624 aaPredicted RBP19.32■□□□□ 0.68
PHGDH-227ENST00000641811 TSPYL2Q9H2G4 693 aaPredicted RBP19.32■□□□□ 0.68
PHGDH-227ENST00000641811 XPNPEP1Q9NQW7 623 aa19.32■□□□□ 0.68
PHGDH-227ENST00000641811 STXBP5LQ9Y2K9 1186 aa19.32■□□□□ 0.68
PHGDH-227ENST00000641811 PPME1Q9Y570 386 aa19.32■□□□□ 0.68
PHGDH-227ENST00000641811 INSL6Q9Y581 213 aa19.32■□□□□ 0.68
PHGDH-227ENST00000641811 ARID2Q68CP9 1835 aa19.31■□□□□ 0.68
PHGDH-227ENST00000641811 LINC01553A4QN01 128 aa19.31■□□□□ 0.68
PHGDH-227ENST00000641811 EPOPA6NHQ4 379 aa19.31■□□□□ 0.68
PHGDH-227ENST00000641811 RFXAPO00287 272 aa19.31■□□□□ 0.68
PHGDH-227ENST00000641811 LAD1O00515 517 aa19.31■□□□□ 0.68
PHGDH-227ENST00000641811 RPA1P27694 616 aa19.31■□□□□ 0.68
PHGDH-227ENST00000641811 CDC25AP30304 524 aa19.31■□□□□ 0.68
PHGDH-227ENST00000641811 CCT6AP40227 531 aaKnown RBP19.31■□□□□ 0.68
PHGDH-227ENST00000641811 PRPHP41219 470 aa19.31■□□□□ 0.68
PHGDH-227ENST00000641811 RARRES1P49788 294 aa19.31■□□□□ 0.68
PHGDH-227ENST00000641811 ATP2C1P98194 919 aaPredicted RBP19.31■□□□□ 0.68
PHGDH-227ENST00000641811 PDIA5Q14554 519 aa19.31■□□□□ 0.68
PHGDH-227ENST00000641811 DTHD1Q6ZMT9 781 aa19.31■□□□□ 0.68
PHGDH-227ENST00000641811 BRAPQ7Z569 592 aa19.31■□□□□ 0.68
PHGDH-227ENST00000641811 ZNF710Q8N1W2 664 aa19.31■□□□□ 0.68
PHGDH-227ENST00000641811 IGSF22Q8N9C0 903 aa19.31■□□□□ 0.68
PHGDH-227ENST00000641811 NLRP4Q96MN2 994 aa19.31■□□□□ 0.68
PHGDH-227ENST00000641811 CCDC43Q96MW1 224 aaKnown RBP19.31■□□□□ 0.68
PHGDH-227ENST00000641811 YME1L1Q96TA2 773 aa19.31■□□□□ 0.68
PHGDH-227ENST00000641811 ADAM2Q99965 735 aa19.31■□□□□ 0.68
PHGDH-227ENST00000641811 DENND3A2RUS2 1198 aa19.3■□□□□ 0.68
PHGDH-227ENST00000641811 FOSL2P15408 326 aa19.3■□□□□ 0.68
PHGDH-227ENST00000641811 LAMTOR4Q0VGL1 99 aa19.3■□□□□ 0.68
PHGDH-227ENST00000641811 ADGRE1Q14246 886 aa19.3■□□□□ 0.68
PHGDH-227ENST00000641811 DSC3Q14574 896 aa19.3■□□□□ 0.68
PHGDH-227ENST00000641811 ODR4Q5SWX8 454 aa19.3■□□□□ 0.68
PHGDH-227ENST00000641811 EXOC8Q8IYI6 725 aa19.3■□□□□ 0.68
PHGDH-227ENST00000641811 PSPC1Q8WXF1 523 aaKnown RBP19.3■□□□□ 0.68
PHGDH-227ENST00000641811 ARNTL2Q8WYA1 636 aa19.3■□□□□ 0.68
PHGDH-227ENST00000641811 NACC1Q96RE7 527 aa19.3■□□□□ 0.68
PHGDH-227ENST00000641811 MTRQ99707 1265 aa19.3■□□□□ 0.68
PHGDH-227ENST00000641811 GCOM2Q9BZD3 368 aaPredicted RBP19.3■□□□□ 0.68
PHGDH-227ENST00000641811 MTUS1Q9ULD2 1270 aa19.3■□□□□ 0.68
PHGDH-227ENST00000641811 COL4A3BPQ9Y5P4 624 aa19.3■□□□□ 0.68
PHGDH-227ENST00000641811 USO1O60763 962 aaKnown RBP19.29■□□□□ 0.68
PHGDH-227ENST00000641811 SRGAP2CP0DJJ0 459 aa19.29■□□□□ 0.68
PHGDH-227ENST00000641811 XRCC6P12956 609 aaKnown RBP eCLIP19.29■□□□□ 0.685e-6■■□□□ 11.5
PHGDH-227ENST00000641811 CDC42EP1Q00587 391 aa19.29■□□□□ 0.68
PHGDH-227ENST00000641811 RESTQ13127 1097 aa19.29■□□□□ 0.68
PHGDH-227ENST00000641811 HAUS3Q68CZ6 603 aa19.29■□□□□ 0.68
PHGDH-227ENST00000641811 FAM173BQ6P4H8 233 aa19.29■□□□□ 0.68
PHGDH-227ENST00000641811 CRIPAKQ8N1N5 446 aa19.29■□□□□ 0.68
PHGDH-227ENST00000641811 SP7Q8TDD2 431 aaPredicted RBP19.29■□□□□ 0.68
PHGDH-227ENST00000641811 SNX29Q8TEQ0 813 aa19.29■□□□□ 0.68
PHGDH-227ENST00000641811 RGS18Q9NS28 235 aa19.29■□□□□ 0.68
PHGDH-227ENST00000641811 MTMR6Q9Y217 621 aa19.29■□□□□ 0.68
PHGDH-227ENST00000641811 CDH23Q9H251 3354 aa19.29■□□□□ 0.68
PHGDH-227ENST00000641811 VWA3AA6NCI4 1184 aa19.28■□□□□ 0.68
PHGDH-227ENST00000641811 DGAT1O75907 488 aa19.28■□□□□ 0.68
PHGDH-227ENST00000641811 MAEAQ7L5Y9 396 aa19.28■□□□□ 0.68
PHGDH-227ENST00000641811 ZNF410Q86VK4 478 aa19.28■□□□□ 0.68
PHGDH-227ENST00000641811 SPRYD3Q8NCJ5 442 aa19.28■□□□□ 0.68
PHGDH-227ENST00000641811 TCP11Q8WWU5 503 aa19.28■□□□□ 0.68
PHGDH-227ENST00000641811 MMTAG2Q9BU76 263 aaKnown RBP19.28■□□□□ 0.68
PHGDH-227ENST00000641811 RAB34Q9BZG1 259 aa19.28■□□□□ 0.68
PHGDH-227ENST00000641811 ATP6V0A4Q9HBG4 840 aa19.28■□□□□ 0.68
PHGDH-227ENST00000641811 IFT122Q9HBG6 1241 aa19.28■□□□□ 0.68
PHGDH-227ENST00000641811 DBR1Q9UK59 544 aaKnown RBP19.28■□□□□ 0.68
PHGDH-227ENST00000641811 KIAA1024Q9UPX6 916 aa19.28■□□□□ 0.68
PHGDH-227ENST00000641811 TTC3P53804 2025 aa19.28■□□□□ 0.68
PHGDH-227ENST00000641811 C9IYK1 514 aa19.27■□□□□ 0.68
PHGDH-227ENST00000641811 STX6O43752 255 aa19.27■□□□□ 0.68
PHGDH-227ENST00000641811 GAS2O43903 313 aaKnown RBP19.27■□□□□ 0.68
PHGDH-227ENST00000641811 DGKIO75912 1065 aa19.27■□□□□ 0.68
PHGDH-227ENST00000641811 SARSP49591 514 aaKnown RBP19.27■□□□□ 0.68
PHGDH-227ENST00000641811 GATMP50440 423 aa19.27■□□□□ 0.68
PHGDH-227ENST00000641811 SF3A1Q15459 793 aaKnown RBP19.27■□□□□ 0.68
PHGDH-227ENST00000641811 NPAS4Q8IUM7 802 aa19.27■□□□□ 0.68
PHGDH-227ENST00000641811 ASAP3Q8TDY4 903 aa19.27■□□□□ 0.68
PHGDH-227ENST00000641811 TGS1Q96RS0 853 aaKnown RBP19.27■□□□□ 0.68
PHGDH-227ENST00000641811 GAS2L1Q99501 681 aaPredicted RBP19.27■□□□□ 0.68
PHGDH-227ENST00000641811 C17orf80Q9BSJ5 609 aa19.27■□□□□ 0.68
PHGDH-227ENST00000641811 MINDY3Q9H8M7 445 aa19.27■□□□□ 0.68
PHGDH-227ENST00000641811 RC3H2Q9HBD1 1191 aaKnown RBP19.27■□□□□ 0.68
PHGDH-227ENST00000641811 GPRC5CQ9NQ84 441 aa19.27■□□□□ 0.68
PHGDH-227ENST00000641811 DDX19AQ9NUU7 478 aaKnown RBP19.27■□□□□ 0.68
PHGDH-227ENST00000641811 MYO9BQ13459 2157 aa19.27■□□□□ 0.68
PHGDH-227ENST00000641811 COL6A3P12111 3177 aa19.27■□□□□ 0.67
PHGDH-227ENST00000641811 HSP90AA1P07900 732 aaKnown RBP19.26■□□□□ 0.67
PHGDH-227ENST00000641811 IGFBP4P22692 258 aa19.26■□□□□ 0.67
PHGDH-227ENST00000641811 ERVK-21P61565 698 aa19.26■□□□□ 0.67
PHGDH-227ENST00000641811 KRT79Q5XKE5 535 aa19.26■□□□□ 0.67
PHGDH-227ENST00000641811 SLC24A5Q71RS6 500 aa19.26■□□□□ 0.67
PHGDH-227ENST00000641811 RNF149Q8NC42 400 aa19.26■□□□□ 0.67
PHGDH-227ENST00000641811 ZNF689Q96CS4 500 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms