RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 ZMYND12Q9H0C1 365 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 POMKQ9H5K3 350 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 PSTPIP2Q9H939 334 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 MLXIPQ9HAP2 919 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 RIC8AQ9NPQ8 531 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 KCNJ14Q9UNX9 436 aa8.41□□□□□ -1.06
PHGDH-225ENST00000641720 FASNP49327 2511 aaKnown RBP8.41□□□□□ -1.06
PHGDH-225ENST00000641720 SMCO2A6NFE2 343 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 C9IYK1 514 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 FIBPO43427 364 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 PI15O43692 258 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 KRT37O76014 449 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 GNAT1P11488 350 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 CLK2P49760 499 aaKnown RBP8.4□□□□□ -1.06
PHGDH-225ENST00000641720 HMGN5P82970 282 aaKnown RBP8.4□□□□□ -1.06
PHGDH-225ENST00000641720 GRIK4Q16099 956 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 ASTLQ6HA08 431 aaPredicted RBP8.4□□□□□ -1.06
PHGDH-225ENST00000641720 LRRC55Q6ZSA7 311 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 FCHSD1Q86WN1 690 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 COLGALT1Q8NBJ5 622 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 CCDC148Q8NFR7 591 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 TMEM40Q8WWA1 233 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 CDCA3Q99618 268 aaPredicted RBP8.4□□□□□ -1.06
PHGDH-225ENST00000641720 PHF20Q9BVI0 1012 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 ANO3Q9BYT9 981 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 TLE6Q9H808 572 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 SH3GLB2Q9NR46 395 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 TUBE1Q9UJT0 475 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 PADI3Q9ULW8 664 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 SORCS3Q9UPU3 1222 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 VWA8A3KMH1 1905 aa8.4□□□□□ -1.06
PHGDH-225ENST00000641720 TRIP11Q15643 1979 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 PDCD11Q14690 1871 aaKnown RBP8.39□□□□□ -1.07
PHGDH-225ENST00000641720 FAM205CA6NFA0 338 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 M0R2N6 131 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 STAM2O75886 525 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 FGF18O76093 207 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 ASGR2P07307 311 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 GJB2P29033 226 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 TCF7P36402 384 aaPredicted RBP8.39□□□□□ -1.07
PHGDH-225ENST00000641720 CLCN5P51795 746 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 NLRP5P59047 1200 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 GUCY1B3Q02153 619 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 PPFIA1Q13136 1202 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 NEDD9Q14511 834 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 DSC3Q14574 896 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 FAM102BQ5T8I3 360 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 UTP14CQ5TAP6 766 aaKnown RBP8.39□□□□□ -1.07
PHGDH-225ENST00000641720 JAKMIP3Q5VZ66 844 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 PCNX4Q63HM2 1172 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 UBALD2Q8IYN6 164 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 ADSSL1Q8N142 457 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 REXO1Q8N1G1 1221 aaKnown RBP8.39□□□□□ -1.07
PHGDH-225ENST00000641720 DAGLBQ8NCG7 672 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 OXER1Q8TDS5 423 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 CCDC12Q8WUD4 166 aaPredicted RBP8.39□□□□□ -1.07
PHGDH-225ENST00000641720 WASF1Q92558 559 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 NKD2Q969F2 451 aaPredicted RBP8.39□□□□□ -1.07
PHGDH-225ENST00000641720 CDHR5Q9HBB8 845 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 C6orf50Q9HD87 102 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 ERVK-5Q9HDB9 667 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 PCDHA4Q9UN74 947 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 LZTS1Q9Y250 596 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 F5P12259 2224 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 EML5Q05BV3 1969 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 GREB1Q4ZG55 1949 aa8.39□□□□□ -1.07
PHGDH-225ENST00000641720 ZBTB42B2RXF5 422 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 ITGB5P18084 799 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 AOC1P19801 751 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 SP100P23497 879 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-225ENST00000641720 SARSP49591 514 aaKnown RBP8.38□□□□□ -1.07
PHGDH-225ENST00000641720 FAM189BP81408 668 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 PLCB3Q01970 1234 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 NR5A1Q13285 461 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 EARS2Q5JPH6 523 aaKnown RBP8.38□□□□□ -1.07
PHGDH-225ENST00000641720 CCDC105Q8IYK2 499 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 ZDHHC14Q8IZN3 488 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 BLIDQ8IZY5 108 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 FAM177A1Q8N128 213 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-225ENST00000641720 TRAPPC12Q8WVT3 735 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 TNFRSF25Q93038 417 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 PPP2R3CQ969Q6 453 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 C8orf76Q96K31 380 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 APOL5Q9BWW9 433 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 FTHL17Q9BXU8 183 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 AAASQ9NRG9 546 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 DLL3Q9NYJ7 618 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 ZNF215Q9UL58 517 aaPredicted RBP8.38□□□□□ -1.07
PHGDH-225ENST00000641720 PCDHA6Q9UN73 950 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 SMC3Q9UQE7 1217 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 PCDHA8Q9Y5H6 950 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 TRPV2Q9Y5S1 764 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 HCFC2Q9Y5Z7 792 aa8.38□□□□□ -1.07
PHGDH-225ENST00000641720 SPDYE3A6NKU9 549 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 NOP56O00567 594 aaKnown RBP8.37□□□□□ -1.07
PHGDH-225ENST00000641720 EDIL3O43854 480 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 INSRRP14616 1297 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 GNA11P29992 359 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 SREBF1P36956 1147 aa8.37□□□□□ -1.07
PHGDH-225ENST00000641720 TECP42680 631 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms