RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 ZBTB8OSQ8IWT0 167 aa14.34□□□□□ -0.11
PHGDH-218ENST00000641491 ELOA2Q8IYF1 753 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-218ENST00000641491 GRAMD1CQ8IYS0 662 aa14.34□□□□□ -0.11
PHGDH-218ENST00000641491 ZNF710Q8N1W2 664 aa14.34□□□□□ -0.11
PHGDH-218ENST00000641491 ENGASEQ8NFI3 743 aa14.34□□□□□ -0.11
PHGDH-218ENST00000641491 DEPTORQ8TB45 409 aa14.34□□□□□ -0.11
PHGDH-218ENST00000641491 TRAPPC12Q8WVT3 735 aa14.34□□□□□ -0.11
PHGDH-218ENST00000641491 NLRP7Q8WX94 980 aa14.34□□□□□ -0.11
PHGDH-218ENST00000641491 C7orf25Q9BPX7 421 aa14.34□□□□□ -0.11
PHGDH-218ENST00000641491 RUSC1Q9BVN2 902 aa14.34□□□□□ -0.11
PHGDH-218ENST00000641491 TRIM9Q9C026 710 aa14.34□□□□□ -0.11
PHGDH-218ENST00000641491 FAM49AQ9H0Q0 323 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-218ENST00000641491 PANK4Q9NVE7 773 aa14.34□□□□□ -0.11
PHGDH-218ENST00000641491 SUCLA2Q9P2R7 463 aaPredicted RBP14.34□□□□□ -0.11
PHGDH-218ENST00000641491 PHLPP2Q6ZVD8 1323 aa14.34□□□□□ -0.11
PHGDH-218ENST00000641491 A0A1W2PPC1 479 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 CCDC169A6NNP5 214 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 ASAP2O43150 1006 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 PQBP1O60828 265 aaKnown RBP14.33□□□□□ -0.12
PHGDH-218ENST00000641491 RPN1P04843 607 aaKnown RBP14.33□□□□□ -0.12
PHGDH-218ENST00000641491 CACNB1Q02641 598 aaPredicted RBP14.33□□□□□ -0.12
PHGDH-218ENST00000641491 PNOCQ13519 176 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 NAALADL2Q58DX5 795 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 ODR4Q5SWX8 454 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 UNC13DQ70J99 1090 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 SESTD1Q86VW0 696 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 RHPN2Q8IUC4 686 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 FAM178BQ8IXR5 827 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 LRRC71Q8N4P6 559 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 REEP2Q9BRK0 252 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 HTATIP2Q9BUP3 242 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 C17orf75Q9HAS0 396 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 SEL1LQ9UBV2 794 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 PRKAG2Q9UGJ0 569 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 DACH1Q9UI36 760 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 COL6A3P12111 3177 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 TCHHQ07283 1943 aa14.33□□□□□ -0.12
PHGDH-218ENST00000641491 DOCK5Q9H7D0 1870 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 SMIM35A0A1B0GVV1 85 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 PVALEFA0A1B0GWK0 134 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 MYMKA6NI61 221 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 LRRIQ4A6NIV6 560 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 K7ENM7 598 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 C22orf31O95567 290 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 PHKA2P46019 1235 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 CLCN3P51790 818 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 NCBP1Q09161 790 aaKnown RBP14.32□□□□□ -0.12
PHGDH-218ENST00000641491 BFSP2Q13515 415 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 CUL4BQ13620 913 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 C1orf186Q6ZWK4 172 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 NME8Q8N427 588 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 TMEM143Q96AN5 459 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 PAWRQ96IZ0 340 aaKnown RBP14.32□□□□□ -0.12
PHGDH-218ENST00000641491 NLRP4Q96MN2 994 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 C2orf40Q9H1Z8 148 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 DHX33Q9H6R0 707 aaKnown RBP14.32□□□□□ -0.12
PHGDH-218ENST00000641491 MRPL44Q9H9J2 332 aaKnown RBP14.32□□□□□ -0.12
PHGDH-218ENST00000641491 KMT5AQ9NQR1 393 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 GINS2Q9Y248 185 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 ATP11BQ9Y2G3 1177 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 PCDHA2Q9Y5H9 948 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 NR2E3Q9Y5X4 410 aa14.32□□□□□ -0.12
PHGDH-218ENST00000641491 NPHP3-ACAD11A0A0J9YXS1 232 aa14.31□□□□□ -0.12
PHGDH-218ENST00000641491 PLS3P13797 630 aa14.31□□□□□ -0.12
PHGDH-218ENST00000641491 SCP2P22307 547 aa14.31□□□□□ -0.12
PHGDH-218ENST00000641491 STRN3Q13033 797 aa14.31□□□□□ -0.12
PHGDH-218ENST00000641491 PSMD2Q13200 908 aa14.31□□□□□ -0.12
PHGDH-218ENST00000641491 PTK7Q13308 1070 aa14.31□□□□□ -0.12
PHGDH-218ENST00000641491 ALCAMQ13740 583 aa14.31□□□□□ -0.12
PHGDH-218ENST00000641491 TARBP2Q15633 366 aaKnown RBP14.31□□□□□ -0.12
PHGDH-218ENST00000641491 UBE2Q1Q7Z7E8 422 aa14.31□□□□□ -0.12
PHGDH-218ENST00000641491 GSDMAQ96QA5 445 aa14.31□□□□□ -0.12
PHGDH-218ENST00000641491 INO80BQ9C086 356 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-218ENST00000641491 TREHO43280 583 aa14.3□□□□□ -0.12
PHGDH-218ENST00000641491 GCNT3O95395 438 aa14.3□□□□□ -0.12
PHGDH-218ENST00000641491 THPOP40225 353 aa14.3□□□□□ -0.12
PHGDH-218ENST00000641491 PPP1R2P41236 205 aa14.3□□□□□ -0.12
PHGDH-218ENST00000641491 NAMPTP43490 491 aa14.3□□□□□ -0.12
PHGDH-218ENST00000641491 PEX3P56589 373 aa14.3□□□□□ -0.12
PHGDH-218ENST00000641491 DPYDQ12882 1025 aa14.3□□□□□ -0.12
PHGDH-218ENST00000641491 COASYQ13057 564 aa14.3□□□□□ -0.12
PHGDH-218ENST00000641491 GIT2Q14161 759 aa14.3□□□□□ -0.12
PHGDH-218ENST00000641491 FAM26FQ5R3K3 315 aa14.3□□□□□ -0.12
PHGDH-218ENST00000641491 GDF6Q6KF10 455 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-218ENST00000641491 SLC39A5Q6ZMH5 540 aa14.3□□□□□ -0.12
PHGDH-218ENST00000641491 TRIML1Q8N9V2 468 aa14.3□□□□□ -0.12
PHGDH-218ENST00000641491 PPP1R13LQ8WUF5 828 aa14.3□□□□□ -0.12
PHGDH-218ENST00000641491 BICD1Q96G01 975 aa14.3□□□□□ -0.12
PHGDH-218ENST00000641491 GCOM2Q9BZD3 368 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-218ENST00000641491 KIAA1468Q9P260 1216 aa14.3□□□□□ -0.12
PHGDH-218ENST00000641491 EXOC7Q9UPT5 735 aa14.3□□□□□ -0.12
PHGDH-218ENST00000641491 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
PHGDH-218ENST00000641491 MBLAC1A4D2B0 266 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-218ENST00000641491 BIN1O00499 593 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 CAND2O75155 1236 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 STBD1O95210 358 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 PRR29P0C7W0 189 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 SRGAP2CP0DJJ0 459 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 CCDC192P0DO97 292 aa14.29□□□□□ -0.12
PHGDH-218ENST00000641491 EFNA5P52803 228 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms