RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 SP4Q02446 784 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 PARP10Q53GL7 1025 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 MAEAQ7L5Y9 396 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 BLIDQ8IZY5 108 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 STK32AQ8WU08 396 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 TGFBRAP1Q8WUH2 860 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 TUBGCP5Q96RT8 1024 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 SLC39A2Q9NP94 309 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 PIH1D3Q9NQM4 214 aaKnown RBP8.84□□□□□ -0.99
NECAP1-227ENST00000640648 ASIC3Q9UHC3 531 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 RWDD2AQ9UIY3 292 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 RSPH10B2B2RC85 870 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 PRKAB2O43741 272 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 TRIM16O95361 564 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 OATP04181 439 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 RPN1P04843 607 aaKnown RBP8.84□□□□□ -0.99
NECAP1-227ENST00000640648 RSPH10BP0C881 870 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 ZNF12P17014 697 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 TNFAIP3P21580 790 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 MAGOHP61326 146 aaKnown RBP8.84□□□□□ -0.99
NECAP1-227ENST00000640648 DHX34Q14147 1143 aaKnown RBP8.84□□□□□ -0.99
NECAP1-227ENST00000640648 GRAMD1BQ3KR37 738 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 KRT25Q7Z3Z0 450 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 HDDC2Q7Z4H3 204 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 LONP2Q86WA8 852 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 ATL2Q8NHH9 583 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 MAGOHBQ96A72 148 aaKnown RBP8.84□□□□□ -0.99
NECAP1-227ENST00000640648 NYXQ9GZU5 481 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 BRD8Q9H0E9 1235 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 EPC1Q9H2F5 836 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 DDX25Q9UHL0 483 aaKnown RBP8.84□□□□□ -0.99
NECAP1-227ENST00000640648 DNAJC12Q9UKB3 198 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 CCPG1Q9ULG6 757 aa8.84□□□□□ -0.99
NECAP1-227ENST00000640648 HMGB3O15347 200 aaKnown RBP8.84□□□□□ -1
NECAP1-227ENST00000640648 PDAP1Q13442 181 aaKnown RBP8.84□□□□□ -1
NECAP1-227ENST00000640648 NCAPG2Q86XI2 1143 aa8.84□□□□□ -1
NECAP1-227ENST00000640648 REXO1Q8N1G1 1221 aaKnown RBP8.84□□□□□ -1
NECAP1-227ENST00000640648 FUCA2Q9BTY2 467 aa8.84□□□□□ -1
NECAP1-227ENST00000640648 UPF3AQ9H1J1 476 aaKnown RBP8.84□□□□□ -1
NECAP1-227ENST00000640648 RIC8AQ9NPQ8 531 aa8.84□□□□□ -1
NECAP1-227ENST00000640648 KRT82Q9NSB4 513 aa8.84□□□□□ -1
NECAP1-227ENST00000640648 ABCC12Q96J65 1359 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 SMCO2A6NFE2 343 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 IGF2BP3O00425 579 aaKnown RBP eCLIP8.83□□□□□ -1
NECAP1-227ENST00000640648 KCNK3O14649 394 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 GNPATO15228 680 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 RPL26P61254 145 aaKnown RBP8.83□□□□□ -1
NECAP1-227ENST00000640648 NUDCD3Q8IVD9 361 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 ZBTB38Q8NAP3 1195 aaPredicted RBP8.83□□□□□ -1
NECAP1-227ENST00000640648 RXFP1Q9HBX9 757 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 PCDHB6Q9Y5E3 794 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 CLTCL1P53675 1640 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 MED23Q9ULK4 1368 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 CDC42BPAQ5VT25 1732 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 PDE8BO95263 885 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 GUCY1A3Q02108 690 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 PPIDQ08752 370 aaKnown RBP8.83□□□□□ -1
NECAP1-227ENST00000640648 EIF2B5Q13144 721 aaKnown RBP8.83□□□□□ -1
NECAP1-227ENST00000640648 DNAJC3Q13217 504 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 PDIA5Q14554 519 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.83□□□□□ -1
NECAP1-227ENST00000640648 OLFML3Q9NRN5 406 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 UFL1O94874 794 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 IGKV5-2P06315 115 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 PAX3P23760 479 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 SMARCA1P28370 1054 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 HSPA1LP34931 641 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 DLG4P78352 724 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 ADCY1Q08828 1119 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 DHX40Q8IX18 779 aaKnown RBP8.83□□□□□ -1
NECAP1-227ENST00000640648 IQCF2Q8IXL9 164 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 ATP8B4Q8TF62 1192 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 ALKBH8Q96BT7 664 aaKnown RBP8.83□□□□□ -1
NECAP1-227ENST00000640648 RMDN1Q96DB5 314 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 IL25Q9H293 177 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 TXNDC16Q9P2K2 825 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 DDX20Q9UHI6 824 aaKnown RBP8.83□□□□□ -1
NECAP1-227ENST00000640648 NFU1Q9UMS0 254 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 CAB39Q9Y376 341 aaPredicted RBP8.83□□□□□ -1
NECAP1-227ENST00000640648 RTCBQ9Y3I0 505 aaKnown RBP8.83□□□□□ -1
NECAP1-227ENST00000640648 ERCC6L2Q5T890 1561 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 TTI1O43156 1089 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 PCCAP05165 728 aaPredicted RBP8.83□□□□□ -1
NECAP1-227ENST00000640648 CASP1P29466 404 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 UBE3CQ15386 1083 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 RBM20Q5T481 1227 aaKnown RBP8.83□□□□□ -1
NECAP1-227ENST00000640648 THEMIS2Q5TEJ8 643 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 TRMT10CQ7L0Y3 403 aaKnown RBP8.83□□□□□ -1
NECAP1-227ENST00000640648 REXO1L1PQ8IX06 675 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 PNMA1Q8ND90 353 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 SUN5Q8TC36 379 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 ATXN2LQ8WWM7 1075 aaKnown RBP8.83□□□□□ -1
NECAP1-227ENST00000640648 RNPEPL1Q9HAU8 725 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 BLOC1S6Q9UL45 172 aa8.83□□□□□ -1
NECAP1-227ENST00000640648 TTC7AQ9ULT0 858 aaPredicted RBP8.83□□□□□ -1
NECAP1-227ENST00000640648 hCG_2014768A0A024R1R8 64 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 WDR91A4D1P6 747 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 GOLGA8IPA6NC78 632 aa8.82□□□□□ -1
NECAP1-227ENST00000640648 ZC3H11AO75152 810 aaKnown RBP eCLIP8.82□□□□□ -1
NECAP1-227ENST00000640648 ADCY7P51828 1080 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms