RNA–Protein interactions for RNA: ENST00000640511.1

SPIN3-241, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-241ENST00000640511 GIT2Q14161 759 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 ZNF658Q5TYW1 1059 aaPredicted RBP12.66□□□□□ -0.38
SPIN3-241ENST00000640511 DENND2CQ68D51 928 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 KBTBD3Q8NAB2 608 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 DIS3LQ8TF46 1054 aaKnown RBP12.66□□□□□ -0.38
SPIN3-241ENST00000640511 FMO2Q99518 471 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 TBC1D30Q9Y2I9 924 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 SMIM31A0A1B0GVY4 71 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 VDRP11473 427 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 MARK3P27448 753 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 DCTN2Q13561 401 aaKnown RBP12.66□□□□□ -0.38
SPIN3-241ENST00000640511 EAPPQ56P03 285 aaPredicted RBP12.66□□□□□ -0.38
SPIN3-241ENST00000640511 LRRC8BQ6P9F7 803 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 ECHDC2Q86YB7 292 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 SLC43A3Q8NBI5 491 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 GFM2Q969S9 779 aaKnown RBP12.66□□□□□ -0.38
SPIN3-241ENST00000640511 BLZF1Q9H2G9 400 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 NRDE2Q9H7Z3 1164 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 NDUFA13Q9P0J0 144 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 EDC4Q6P2E9 1401 aaKnown RBP12.66□□□□□ -0.38
SPIN3-241ENST00000640511 PDE5AO76074 875 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 HNRNPH3P31942 346 aaKnown RBP12.66□□□□□ -0.38
SPIN3-241ENST00000640511 MGAT5Q09328 741 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 FIGNQ5HY92 759 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 RALYLQ86SE5 291 aaKnown RBP12.66□□□□□ -0.38
SPIN3-241ENST00000640511 ANKLE1Q8NAG6 615 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 MGARPQ8TDB4 240 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 SCFD2Q8WU76 684 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 TUBGCP2Q9BSJ2 902 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 MYLK2Q9H1R3 596 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 FAIMQ9NVQ4 179 aa12.66□□□□□ -0.38
SPIN3-241ENST00000640511 DDX43Q9NXZ2 648 aaKnown RBP12.66□□□□□ -0.38
SPIN3-241ENST00000640511 PACSIN2Q9UNF0 486 aaPredicted RBP12.66□□□□□ -0.38
SPIN3-241ENST00000640511 BHMG1C9JSJ3 638 aaPredicted RBP12.65□□□□□ -0.38
SPIN3-241ENST00000640511 SERPINB7O75635 380 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 PLCG2P16885 1265 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 ACVR2BQ13705 512 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 WDR72Q3MJ13 1102 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 C6orf183Q5T699 404 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 MEI1Q5TIA1 1274 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 SYT2Q8N9I0 419 aaPredicted RBP12.65□□□□□ -0.38
SPIN3-241ENST00000640511 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.65□□□□□ -0.38
SPIN3-241ENST00000640511 ERP27Q96DN0 273 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 ZMYND12Q9H0C1 365 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 EURLQ9NYK6 297 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 CLIC5Q9NZA1 410 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 DBNLQ9UJU6 430 aaKnown RBP12.65□□□□□ -0.38
SPIN3-241ENST00000640511 UTP11Q9Y3A2 253 aaKnown RBP12.65□□□□□ -0.38
SPIN3-241ENST00000640511 FADS3Q9Y5Q0 445 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 TRIM49BA6NDI0 452 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 RANBP6O60518 1105 aaKnown RBP12.65□□□□□ -0.38
SPIN3-241ENST00000640511 PRCPP42785 496 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 ARFIP2P53365 341 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 TBL3Q12788 808 aaKnown RBP12.65□□□□□ -0.38
SPIN3-241ENST00000640511 CCDC153Q494R4 210 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 NEPROQ6NW34 567 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 DIS3L2Q8IYB7 885 aaKnown RBP12.65□□□□□ -0.38
SPIN3-241ENST00000640511 HAUS7Q99871 368 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 PABPC3Q9H361 631 aaKnown RBP12.65□□□□□ -0.38
SPIN3-241ENST00000640511 TUT1Q9H6E5 874 aaKnown RBP12.65□□□□□ -0.38
SPIN3-241ENST00000640511 SYNCQ9H7C4 482 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 TIMMDC1Q9NPL8 285 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 FAM32AQ9Y421 112 aaKnown RBP12.65□□□□□ -0.38
SPIN3-241ENST00000640511 TMEM94Q12767 1356 aa12.65□□□□□ -0.38
SPIN3-241ENST00000640511 NPHP3-ACAD11A0A0J9YXS1 232 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 KANSL1LA0AUZ9 987 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 PLEKHG3A1L390 1219 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 KCNK3O14649 394 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 STK10O94804 968 aaKnown RBP12.64□□□□□ -0.39
SPIN3-241ENST00000640511 TXKP42681 527 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 EMP3P54852 163 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 HAND2P61296 217 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 MKRN3Q13064 507 aaKnown RBP12.64□□□□□ -0.39
SPIN3-241ENST00000640511 ITGA9Q13797 1035 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 KIF22Q14807 665 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 HLFQ16534 295 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 CERKLQ49MI3 558 aaPredicted RBP12.64□□□□□ -0.39
SPIN3-241ENST00000640511 C4orf50Q6ZRC1 276 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.64□□□□□ -0.39
SPIN3-241ENST00000640511 NCOA7Q8NI08 942 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 LRRC37BQ96QE4 947 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 NACAP1Q9BZK3 213 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 KIAA1683Q9H0B3 1180 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 DDX47Q9H0S4 455 aaKnown RBP12.64□□□□□ -0.39
SPIN3-241ENST00000640511 ATAD3AQ9NVI7 634 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 STK32BQ9NY57 414 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 OXSR1O95747 527 aaPredicted RBP12.64□□□□□ -0.39
SPIN3-241ENST00000640511 POTEIP0CG38 1075 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 COL6A2P12110 1019 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 ATF3P18847 181 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 ENDOUP21128 410 aaKnown RBP12.64□□□□□ -0.39
SPIN3-241ENST00000640511 SERPINB8P50452 374 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 PDCD4Q53EL6 469 aaKnown RBP12.64□□□□□ -0.39
SPIN3-241ENST00000640511 SLC7A5P1Q8MH63 180 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 ZNF713Q8N859 430 aaPredicted RBP12.64□□□□□ -0.39
SPIN3-241ENST00000640511 GDAP1Q8TB36 358 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 SYMPKQ92797 1274 aaKnown RBP12.64□□□□□ -0.39
SPIN3-241ENST00000640511 GRAMD1AQ96CP6 724 aa12.64□□□□□ -0.39
SPIN3-241ENST00000640511 DGCR14Q96DF8 476 aaKnown RBP12.64□□□□□ -0.39
SPIN3-241ENST00000640511 HSPBAP1Q96EW2 488 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms