RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 ATG16L1Q676U5 607 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 TWF2Q6IBS0 349 aaKnown RBP15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 LY9Q9HBG7 655 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 ABHD10Q9NUJ1 306 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 MID2Q9UJV3 735 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 HEY1Q9Y5J3 304 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 GPC3P51654 580 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 TNFAIP2Q03169 654 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 GFPT1Q06210 699 aaPredicted RBP15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 SCN4BQ8IWT1 228 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 CELF1Q92879 486 aaKnown RBP15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 FAM167AQ96KS9 214 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 KLHL8Q9P2G9 620 aaPredicted RBP15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 STK36Q9NRP7 1315 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 PHKA2P46019 1235 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 CCDC138Q96M89 665 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 CHEK2O96017 543 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 APOEP02649 317 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 PEX19P40855 299 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 NT5C2P49902 561 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 KRT82Q9NSB4 513 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 MBD5Q9P267 1494 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 COL15A1P39059 1388 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 ESRRAP11474 423 aaPredicted RBP15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 PAMP19021 973 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 TMEM35BQ8NCS4 154 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 TUBB6Q9BUF5 446 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 GOLPH3LQ9H4A5 285 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 KIAA1586Q9HCI6 787 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 DCP1AQ9NPI6 582 aaPredicted RBP15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 TBC1D22BQ9NU19 505 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 PLAAQ9Y263 795 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 CPDO75976 1380 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 LRRC53A6NM62 1247 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 LGALS16A8MUM7 142 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 VGLL3A8MV65 326 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 IPO5O00410 1097 aaKnown RBP15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 PODXLO00592 558 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 GPC5P78333 572 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 CDR2Q01850 454 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 KCNH2Q12809 1159 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 RHPN2Q8IUC4 686 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 ZNF579Q8NAF0 562 aaKnown RBP15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 PSPC1Q8WXF1 523 aaKnown RBP15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 ZNF302Q9NR11 478 aa15.75■□□□□ 0.11
HNRNPU-226ENST00000640218 DENND3A2RUS2 1198 aa15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 ZRANB2O95218 330 aaKnown RBP eCLIP15.74■□□□□ 0.113e-6■■■■■ 28.7
HNRNPU-226ENST00000640218 PPARGP37231 505 aaPredicted RBP15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 THOC1Q96FV9 657 aaKnown RBP15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 ZNF668Q96K58 619 aaPredicted RBP15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 XAB2Q9HCS7 855 aaKnown RBP15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 TOPORSQ9NS56 1045 aaPredicted RBP15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 SNX24Q9Y343 169 aa15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 GOLGA8MH3BSY2 632 aa15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 HABP4Q5JVS0 413 aaKnown RBP15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 PROM2Q8N271 834 aa15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 DIS3Q9Y2L1 958 aaKnown RBP15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 MYO3BQ8WXR4 1341 aa15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 NSUN2Q08J23 767 aaKnown RBP eCLIP15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 TAF1BQ53T94 588 aaPredicted RBP15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 SWSAP1Q6NVH7 229 aa15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 TTC17Q96AE7 1141 aa15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 FBXO40Q9UH90 709 aa15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 MROH7-TTC4A0A0A0MT08 1334 aa15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 HUS1O60921 280 aa15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 PRR29P0C7W0 189 aa15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 HDLBPQ00341 1268 aaKnown RBP15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 KIF19Q2TAC6 998 aa15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 NSUN6Q8TEA1 469 aaKnown RBP15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 ASNSD1Q9NWL6 643 aa15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 HACD3Q9P035 362 aa15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 UBE4BO95155 1302 aa15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 HSPA4LO95757 839 aa15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 RBM41Q96IZ5 413 aaKnown RBP15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 TTC25Q96NG3 672 aa15.74■□□□□ 0.11
HNRNPU-226ENST00000640218 POTEFA5A3E0 1075 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 POTEIP0CG38 1075 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 HSPA8P11142 646 aaKnown RBP15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 STAT3P40763 770 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 TXNRD1Q16881 649 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 NUGGCQ68CJ6 796 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 POTEGQ6S5H5 508 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 POTEEQ6S8J3 1075 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 BRINP3Q76B58 766 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 ADGRF4Q8IZF3 695 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 FBXL13Q8NEE6 735 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 RNF146Q9NTX7 359 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 SUCLA2Q9P2R7 463 aaPredicted RBP15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 SH3BGRP55822 239 aaPredicted RBP15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 PDCD6IPQ8WUM4 868 aaKnown RBP15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 FAM20AQ96MK3 541 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 SYNGAP1Q96PV0 1343 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 HMGB1P1B2RPK0 211 aaPredicted RBP15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 PI4K2BG5E9Z4 385 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 CCDC188H7C350 402 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 ZNF157P51786 506 aaPredicted RBP15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 ANGPTL8Q6UXH0 198 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 VPS39Q96JC1 886 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 GABBR1Q9UBS5 961 aa15.73■□□□□ 0.11
HNRNPU-226ENST00000640218 ARL4CP56559 192 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms