RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	EMID1	Q96A84	441 aa	Predicted RBP	11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	CTAGE1	Q96RT6	745 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	TIPIN	Q9BVW5	301 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	SUGCT	Q9HAC7	445 aa		11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	GNE	Q9Y223	722 aa	Known RBP	11.53	□□□□□ -0.56
NECAP1-223	ENST00000640091	EMSY	Q7Z589	1322 aa		11.52	□□□□□ -0.56
NECAP1-223	ENST00000640091	WDR81	Q562E7	1941 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	HTT	P42858	3142 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	CEP350	Q5VT06	3117 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	ZBTB42	B2RXF5	422 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	PDXK	O00764	312 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	EIF3D	O15371	548 aa	Known RBP eCLIP	11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	EEF1G	P26641	437 aa	Known RBP	11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	MAP2K2	P36507	400 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	COPB1	P53618	953 aa	Known RBP	11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	IGBP1	P78318	339 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	DMP1	Q13316	513 aa	Predicted RBP	11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	ARID5B	Q14865	1188 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	BMT2	Q1RMZ1	405 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	ANKRD20A12P	Q8NF67	263 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	NOC3L	Q8WTT2	800 aa	Known RBP	11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	PPP1R13L	Q8WUF5	828 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	TRIB2	Q92519	343 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	KIFAP3	Q92845	792 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	TUBGCP2	Q9BSJ2	902 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	C16orf70	Q9BSU1	422 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	STRA6	Q9BX79	667 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	ERAP1	Q9NZ08	941 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	TRAF3IP3	Q9Y228	551 aa		11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	MYH9	P35579	1960 aa	Known RBP	11.52	□□□□□ -0.57
NECAP1-223	ENST00000640091	TISP43	B9A030	160 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	PPP1R37	O75864	691 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	IGHA2	P01877	340 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	TPM3	P06753	285 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	MMP3	P08254	477 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	NR2F2	P24468	414 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	MTIF2	P46199	727 aa	Known RBP	11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	SMTN	P53814	917 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	SPAG1	Q07617	926 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	TBC1D8B	Q0IIM8	1120 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	TRIM32	Q13049	653 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	SYCP3	Q8IZU3	236 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	LRRC71	Q8N4P6	559 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	FAM167A	Q96KS9	214 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	KMT5A	Q9NQR1	393 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	ZMYM2	Q9UBW7	1377 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	ZSWIM8	A7E2V4	1837 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091		H3BRB1	525 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	MAF	O75444	373 aa	Predicted RBP	11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	XRCC5	P13010	732 aa	Known RBP	11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	INSRR	P14616	1297 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	SLC26A2	P50443	739 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	NCKAP1L	P55160	1127 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	GTF2B	Q00403	316 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	KIF22	Q14807	665 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	FILIP1L	Q4L180	1135 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	STXBP4	Q6ZWJ1	553 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	TLK2	Q86UE8	772 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	VSTM4	Q8IW00	320 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	FAM114A1	Q8IWE2	563 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	TMEM161B	Q8NDZ6	487 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	TRPV1	Q8NER1	839 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	CD99L2	Q8TCZ2	262 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	ASAP3	Q8TDY4	903 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	NTPCR	Q9BSD7	190 aa	Known RBP	11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	TUT1	Q9H6E5	874 aa	Known RBP	11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	TYW1	Q9NV66	732 aa	Known RBP	11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	ADGRA3	Q8IWK6	1321 aa		11.51	□□□□□ -0.57
NECAP1-223	ENST00000640091	DENND3	A2RUS2	1198 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	GOLGA6L6	A8MZA4	724 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	CALU	O43852	315 aa	Predicted RBP	11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	HBP1	O60381	514 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	FGFR1OP	O95684	399 aa	Known RBP	11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	NR3C1	P04150	777 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	MAPT	P10636	758 aa	Known RBP	11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	ELN	P15502	786 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	GLRA2	P23416	452 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	CNGA1	P29973	690 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	ARL2	P36404	184 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	CASP4	P49662	377 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	BEX3	Q00994	111 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	UBXN1	Q04323	297 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	MKRN4P	Q13434	485 aa	Predicted RBP	11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	DGKD	Q16760	1214 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	EDRF1	Q3B7T1	1238 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	NOC4L	Q9BVI4	516 aa	Known RBP	11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	GBP3	Q9H0R5	595 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	FAM184B	Q9ULE4	1060 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	USP20	Q9Y2K6	914 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	ZNF236	Q9UL36	1845 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091		A6NJR5	290 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	CETN3	O15182	167 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	GJB1	P08034	283 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	RFC5	P40937	340 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	GOLGA8F	Q08AF8	430 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	GOLGA8DP	Q0D2H9	430 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	CCDC40	Q4G0X9	1142 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	CEP135	Q66GS9	1140 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	FOXR2	Q6PJQ5	311 aa		11.5	□□□□□ -0.57

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