RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 MAFO75444 373 aaPredicted RBP7.04□□□□□ -1.28
CCDC7-216ENST00000640058 FOXL1Q12952 345 aa7.04□□□□□ -1.28
CCDC7-216ENST00000640058 PCBP1Q15365 356 aaKnown RBP eCLIP7.04□□□□□ -1.28
CCDC7-216ENST00000640058 ZNF808Q8N4W9 903 aaPredicted RBP7.04□□□□□ -1.28
CCDC7-216ENST00000640058 C7orf31Q8N865 590 aa7.04□□□□□ -1.28
CCDC7-216ENST00000640058 SHCBP1Q8NEM2 672 aa7.04□□□□□ -1.28
CCDC7-216ENST00000640058 MTFR1LQ9H019 292 aa7.04□□□□□ -1.28
CCDC7-216ENST00000640058 SEMA4AQ9H3S1 761 aa7.04□□□□□ -1.28
CCDC7-216ENST00000640058 DNAI1Q9UI46 699 aa7.04□□□□□ -1.28
CCDC7-216ENST00000640058 CTDP1Q9Y5B0 961 aaPredicted RBP7.04□□□□□ -1.28
CCDC7-216ENST00000640058 RBM8AQ9Y5S9 174 aaKnown RBP7.04□□□□□ -1.28
CCDC7-216ENST00000640058 SLC26A4O43511 780 aa7.03□□□□□ -1.28
CCDC7-216ENST00000640058 AMHP03971 560 aa7.03□□□□□ -1.28
CCDC7-216ENST00000640058 C6P13671 934 aa7.03□□□□□ -1.28
CCDC7-216ENST00000640058 RPS19P39019 145 aaKnown RBP7.03□□□□□ -1.28
CCDC7-216ENST00000640058 RIN1Q13671 783 aa7.03□□□□□ -1.28
CCDC7-216ENST00000640058 Q6ZSN1 163 aa7.03□□□□□ -1.28
CCDC7-216ENST00000640058 MYL10Q9BUA6 226 aa7.03□□□□□ -1.28
CCDC7-216ENST00000640058 TARS2Q9BW92 718 aaKnown RBP7.03□□□□□ -1.28
CCDC7-216ENST00000640058 VPS11Q9H270 941 aa7.03□□□□□ -1.28
CCDC7-216ENST00000640058 POFUT1Q9H488 388 aa7.03□□□□□ -1.28
CCDC7-216ENST00000640058 AGO3Q9H9G7 860 aaKnown RBP7.03□□□□□ -1.28
CCDC7-216ENST00000640058 H2AFYO75367 372 aaKnown RBP7.02□□□□□ -1.29
CCDC7-216ENST00000640058 F2P00734 622 aa7.02□□□□□ -1.29
CCDC7-216ENST00000640058 FSHBP01225 129 aa7.02□□□□□ -1.29
CCDC7-216ENST00000640058 DSG1Q02413 1049 aa7.02□□□□□ -1.29
CCDC7-216ENST00000640058 ADCY2Q08462 1091 aa7.02□□□□□ -1.29
CCDC7-216ENST00000640058 SAFB2Q14151 953 aaKnown RBP eCLIP7.02□□□□□ -1.29
CCDC7-216ENST00000640058 GRM7Q14831 915 aa7.02□□□□□ -1.29
CCDC7-216ENST00000640058 NRN1LQ496H8 165 aa7.02□□□□□ -1.29
CCDC7-216ENST00000640058 NME9Q86XW9 330 aa7.02□□□□□ -1.29
CCDC7-216ENST00000640058 RPGRQ92834 1020 aaKnown RBP7.02□□□□□ -1.29
CCDC7-216ENST00000640058 GCDHQ92947 438 aaPredicted RBP7.02□□□□□ -1.29
CCDC7-216ENST00000640058 DYDC2Q96IM9 177 aa7.02□□□□□ -1.29
CCDC7-216ENST00000640058 RPL10LQ96L21 214 aaKnown RBP7.02□□□□□ -1.29
CCDC7-216ENST00000640058 GPR101Q96P66 508 aaPredicted RBP7.02□□□□□ -1.29
CCDC7-216ENST00000640058 ZMAT4Q9H898 229 aa7.02□□□□□ -1.29
CCDC7-216ENST00000640058 PLA2G3Q9NZ20 509 aa7.02□□□□□ -1.29
CCDC7-216ENST00000640058 KCMF1Q9P0J7 381 aa7.02□□□□□ -1.29
CCDC7-216ENST00000640058 VWA7Q9Y334 891 aa7.02□□□□□ -1.29
CCDC7-216ENST00000640058 TESMINQ9Y4I5 508 aa7.02□□□□□ -1.29
CCDC7-216ENST00000640058 C2orf78A6NCI8 922 aa7.01□□□□□ -1.29
CCDC7-216ENST00000640058 PRPF6O94906 941 aaKnown RBP7.01□□□□□ -1.29
CCDC7-216ENST00000640058 BPIFB4P59827 614 aa7.01□□□□□ -1.29
CCDC7-216ENST00000640058 ADCY1Q08828 1119 aa7.01□□□□□ -1.29
CCDC7-216ENST00000640058 SEPT7Q16181 437 aaKnown RBP7.01□□□□□ -1.29
CCDC7-216ENST00000640058 USP39Q53GS9 565 aaKnown RBP7.01□□□□□ -1.29
CCDC7-216ENST00000640058 UNQ6494/PRO21346Q6UXR6 183 aa7.01□□□□□ -1.29
CCDC7-216ENST00000640058 PHYKPLQ8IUZ5 450 aa7.01□□□□□ -1.29
CCDC7-216ENST00000640058 EDAQ92838 391 aa7.01□□□□□ -1.29
CCDC7-216ENST00000640058 FEZ1Q99689 392 aa7.01□□□□□ -1.29
CCDC7-216ENST00000640058 ZNF747Q9BV97 191 aa7.01□□□□□ -1.29
CCDC7-216ENST00000640058 POLR3BQ9NW08 1133 aaPredicted RBP7.01□□□□□ -1.29
CCDC7-216ENST00000640058 USP35Q9P2H5 1018 aa7.01□□□□□ -1.29
CCDC7-216ENST00000640058 A0A1W2PRX2 142 aa7□□□□□ -1.29
CCDC7-216ENST00000640058 HNRNPLP14866 589 aaKnown RBP eCLIP7□□□□□ -1.29
CCDC7-216ENST00000640058 POU3F2P20265 443 aaPredicted RBP7□□□□□ -1.29
CCDC7-216ENST00000640058 TACR2P21452 398 aa7□□□□□ -1.29
CCDC7-216ENST00000640058 SESN2P58004 480 aaPredicted RBP7□□□□□ -1.29
CCDC7-216ENST00000640058 DALRD3Q5D0E6 543 aaKnown RBP7□□□□□ -1.29
CCDC7-216ENST00000640058 TIGD7Q6NT04 549 aaPredicted RBP7□□□□□ -1.29
CCDC7-216ENST00000640058 Q8N1X5 172 aa7□□□□□ -1.29
CCDC7-216ENST00000640058 D2HGDHQ8N465 521 aa7□□□□□ -1.29
CCDC7-216ENST00000640058 ANKRD53Q8N9V6 530 aa7□□□□□ -1.29
CCDC7-216ENST00000640058 EXTL1Q92935 676 aa7□□□□□ -1.29
CCDC7-216ENST00000640058 NKD2Q969F2 451 aaPredicted RBP7□□□□□ -1.29
CCDC7-216ENST00000640058 GFM2Q969S9 779 aaKnown RBP7□□□□□ -1.29
CCDC7-216ENST00000640058 SLC7A6OSQ96CW6 309 aaPredicted RBP7□□□□□ -1.29
CCDC7-216ENST00000640058 FAM89AQ96GI7 184 aa7□□□□□ -1.29
CCDC7-216ENST00000640058 ORAI3Q9BRQ5 295 aa7□□□□□ -1.29
CCDC7-216ENST00000640058 NELFAQ9H3P2 528 aa7□□□□□ -1.29
CCDC7-216ENST00000640058 MS4A5Q9H3V2 200 aa7□□□□□ -1.29
CCDC7-216ENST00000640058 MTG2Q9H4K7 406 aa7□□□□□ -1.29
CCDC7-216ENST00000640058 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7□□□□□ -1.29
CCDC7-216ENST00000640058 TLR9Q9NR96 1032 aa7□□□□□ -1.29
CCDC7-216ENST00000640058 LCHNA4D1U4 455 aa6.99□□□□□ -1.29
CCDC7-216ENST00000640058 GOLGA8BA8MQT2 603 aa6.99□□□□□ -1.29
CCDC7-216ENST00000640058 ADCY7P51828 1080 aa6.99□□□□□ -1.29
CCDC7-216ENST00000640058 KPNA1P52294 538 aaPredicted RBP6.99□□□□□ -1.29
CCDC7-216ENST00000640058 BCAR1P56945 870 aa6.99□□□□□ -1.29
CCDC7-216ENST00000640058 TCIRG1Q13488 830 aa6.99□□□□□ -1.29
CCDC7-216ENST00000640058 MAMDC4Q6UXC1 1216 aa6.99□□□□□ -1.29
CCDC7-216ENST00000640058 SGMS1Q86VZ5 419 aa6.99□□□□□ -1.29
CCDC7-216ENST00000640058 PASD1Q8IV76 773 aa6.99□□□□□ -1.29
CCDC7-216ENST00000640058 EFHBQ8N7U6 833 aa6.99□□□□□ -1.29
CCDC7-216ENST00000640058 RABGGTAQ92696 567 aa6.99□□□□□ -1.29
CCDC7-216ENST00000640058 MFSD3Q96ES6 412 aa6.99□□□□□ -1.29
CCDC7-216ENST00000640058 WDR92Q96MX6 357 aa6.99□□□□□ -1.29
CCDC7-216ENST00000640058 ZNF341Q9BYN7 854 aa6.99□□□□□ -1.29
CCDC7-216ENST00000640058 SCAND2PQ9GZW5 306 aaPredicted RBP6.99□□□□□ -1.29
CCDC7-216ENST00000640058 TGM5O43548 720 aa6.98□□□□□ -1.29
CCDC7-216ENST00000640058 AKAP8O43823 692 aaKnown RBP6.98□□□□□ -1.29
CCDC7-216ENST00000640058 CD40P25942 277 aa6.98□□□□□ -1.29
CCDC7-216ENST00000640058 SART3Q15020 963 aaKnown RBP6.98□□□□□ -1.29
CCDC7-216ENST00000640058 KRT40Q6A162 431 aa6.98□□□□□ -1.29
CCDC7-216ENST00000640058 KIAA1841Q6NSI8 718 aa6.98□□□□□ -1.29
CCDC7-216ENST00000640058 CRIP3Q6Q6R5 217 aa6.98□□□□□ -1.29
CCDC7-216ENST00000640058 RNF207Q6ZRF8 634 aa6.98□□□□□ -1.29
CCDC7-216ENST00000640058 KANSL1Q7Z3B3 1105 aa6.98□□□□□ -1.29
CCDC7-216ENST00000640058 BMP8AQ7Z5Y6 402 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms