RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 BLZF1Q9H2G9 400 aa9.78□□□□□ -0.84
PAX6-259ENST00000639916 DHX36Q9H2U1 1008 aaKnown RBP9.78□□□□□ -0.84
PAX6-259ENST00000639916 DNAJC18Q9H819 358 aa9.78□□□□□ -0.84
PAX6-259ENST00000639916 ZMYND8Q9ULU4 1186 aaPredicted RBP9.78□□□□□ -0.84
PAX6-259ENST00000639916 SCN9AQ15858 1988 aa9.78□□□□□ -0.84
PAX6-259ENST00000639916 ESYT3A0FGR9 886 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 GCOM1H8Y6P7 765 aaPredicted RBP9.77□□□□□ -0.85
PAX6-259ENST00000639916 GFPT2O94808 682 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 MYZAPP0CAP1 466 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 RARAP10276 462 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 PPP2R2AP63151 447 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 ZNF543Q08ER8 600 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 SF3A3Q12874 501 aaKnown RBP eCLIP9.77□□□□□ -0.85
PAX6-259ENST00000639916 CBX3Q13185 183 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 CMPK2Q5EBM0 449 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 PDXDC2PQ6P474 469 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 CHRDL2Q6WN34 429 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 TRPM8Q7Z2W7 1104 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 LONP2Q86WA8 852 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 REXO1Q8N1G1 1221 aaKnown RBP9.77□□□□□ -0.85
PAX6-259ENST00000639916 CCDC17Q96LX7 622 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 IDI2Q9BXS1 227 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 SMARCAL1Q9NZC9 954 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 PI4KBQ9UBF8 816 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 FAM198AQ9UFP1 575 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 LNPEPQ9UIQ6 1025 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 SERPINA10Q9UK55 444 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 SNX12Q9UMY4 172 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 GOLGA6L10A0A0M3HER8 536 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 ZSCAN5CA6NGD5 496 aaPredicted RBP9.77□□□□□ -0.85
PAX6-259ENST00000639916 PP2D1A8MPX8 630 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 LAD1O00515 517 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 RAD21O60216 631 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 GLI1P08151 1106 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 ERCC5P28715 1186 aaPredicted RBP9.77□□□□□ -0.85
PAX6-259ENST00000639916 GSTT1P30711 240 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 KRT9P35527 623 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 MSH2P43246 934 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 USP46P62068 366 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 PRPF4BQ13523 1007 aaKnown RBP9.77□□□□□ -0.85
PAX6-259ENST00000639916 ITIH4Q14624 930 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 KBTBD12Q3ZCT8 623 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 TTBK2Q6IQ55 1244 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 KLHL10Q6JEL2 608 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 C8orf74Q6P047 294 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 ADGRF4Q8IZF3 695 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 TBCKQ8TEA7 893 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 FAM81BQ96LP2 452 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 LACRTQ9GZZ8 138 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 VCXQ9H320 206 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 JMJD4Q9H9V9 463 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 GDF3Q9NR23 364 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 STK38LQ9Y2H1 464 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 NUB1Q9Y5A7 615 aa9.77□□□□□ -0.85
PAX6-259ENST00000639916 RCCD1A6NED2 376 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 hCG_1984214I3L0E3 225 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 KRT86O43790 486 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 PFDN1O60925 122 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 TMCC1O94876 653 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 CD44P16070 742 aaKnown RBP9.76□□□□□ -0.85
PAX6-259ENST00000639916 SLC16A2P36021 539 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 UBA7P41226 1012 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 ATP11AP98196 1134 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 CERKLQ49MI3 558 aaPredicted RBP9.76□□□□□ -0.85
PAX6-259ENST00000639916 KCTD1Q719H9 257 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 SH3BP5LQ7L8J4 393 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 NEK8Q86SG6 692 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 TMEM110Q86TL2 294 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 SESTD1Q86VW0 696 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 IFT20Q8IY31 132 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 SMYD4Q8IYR2 804 aaPredicted RBP9.76□□□□□ -0.85
PAX6-259ENST00000639916 KIF2BQ8N4N8 673 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 ZNF713Q8N859 430 aaPredicted RBP9.76□□□□□ -0.85
PAX6-259ENST00000639916 GBP7Q8N8V2 638 aaPredicted RBP9.76□□□□□ -0.85
PAX6-259ENST00000639916 IFT81Q8WYA0 676 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 CTAGE1Q96RT6 745 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 TDRD3Q9H7E2 651 aaKnown RBP9.76□□□□□ -0.85
PAX6-259ENST00000639916 ABCF3Q9NUQ8 709 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 TMEM260Q9NX78 707 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 NKX1-2Q9UD57 310 aaPredicted RBP9.76□□□□□ -0.85
PAX6-259ENST00000639916 PNMA6FA0A0J9YX94 578 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 ESYT2A0FGR8 921 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 F8VZ95 297 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 UBOX5O94941 541 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 ADCY7P51828 1080 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 LACTBP83111 547 aaPredicted RBP9.76□□□□□ -0.85
PAX6-259ENST00000639916 SHROOM1Q2M3G4 852 aaPredicted RBP9.76□□□□□ -0.85
PAX6-259ENST00000639916 ODF2Q5BJF6 829 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 GPATCH4Q5T3I0 446 aaKnown RBP9.76□□□□□ -0.85
PAX6-259ENST00000639916 CDKAL1Q5VV42 579 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 CHADLQ6NUI6 762 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 EXOC3L1Q86VI1 746 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 SUPT20HQ8NEM7 779 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 OR2W6PQ8NHA6 318 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 AZIN2Q96A70 460 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 BRD8Q9H0E9 1235 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 ECT2Q9H8V3 914 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 DISC1Q9NRI5 854 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 EHD2Q9NZN4 543 aa9.76□□□□□ -0.85
PAX6-259ENST00000639916 DUSP10Q9Y6W6 482 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms