RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 MOV10L1Q9BXT6 1211 aaKnown RBP16.54■□□□□ 0.24
TRIM3-215ENST00000639856 RBAK-RBAKDNI3L0D1 243 aa16.53■□□□□ 0.24
TRIM3-215ENST00000639856 SRGAP2O75044 1071 aa16.53■□□□□ 0.24
TRIM3-215ENST00000639856 FAM13AO94988 1023 aa16.53■□□□□ 0.24
TRIM3-215ENST00000639856 NR3C1P04150 777 aa16.53■□□□□ 0.24
TRIM3-215ENST00000639856 KCNA2P16389 499 aa16.53■□□□□ 0.24
TRIM3-215ENST00000639856 QARSP47897 775 aaKnown RBP16.53■□□□□ 0.24
TRIM3-215ENST00000639856 KCNA1Q09470 495 aa16.53■□□□□ 0.24
TRIM3-215ENST00000639856 NLRX1Q86UT6 975 aa16.53■□□□□ 0.24
TRIM3-215ENST00000639856 GPIHBP1Q8IV16 184 aa16.53■□□□□ 0.24
TRIM3-215ENST00000639856 TXLNBQ8N3L3 684 aa16.53■□□□□ 0.24
TRIM3-215ENST00000639856 GANQ9H2C0 597 aa16.53■□□□□ 0.24
TRIM3-215ENST00000639856 JRKLQ9Y4A0 524 aa16.53■□□□□ 0.24
TRIM3-215ENST00000639856 CAPN6Q9Y6Q1 641 aa16.53■□□□□ 0.24
TRIM3-215ENST00000639856 ARHGEF35A5YM69 484 aa16.52■□□□□ 0.24
TRIM3-215ENST00000639856 AKAP3O75969 853 aa16.52■□□□□ 0.24
TRIM3-215ENST00000639856 SASH3O75995 380 aa16.52■□□□□ 0.24
TRIM3-215ENST00000639856 AFPP02771 609 aaKnown RBP16.52■□□□□ 0.24
TRIM3-215ENST00000639856 TUBBP07437 444 aa16.52■□□□□ 0.24
TRIM3-215ENST00000639856 RHOXF2BP0C7M4 288 aa16.52■□□□□ 0.24
TRIM3-215ENST00000639856 XRCC5P13010 732 aaKnown RBP16.52■□□□□ 0.24
TRIM3-215ENST00000639856 GFPT1Q06210 699 aaPredicted RBP16.52■□□□□ 0.24
TRIM3-215ENST00000639856 LONRF2Q1L5Z9 754 aa16.52■□□□□ 0.24
TRIM3-215ENST00000639856 GPAT2Q6NUI2 795 aa16.52■□□□□ 0.24
TRIM3-215ENST00000639856 MYCT1Q8N699 235 aa16.52■□□□□ 0.24
TRIM3-215ENST00000639856 RPGRIP1Q96KN7 1286 aa16.52■□□□□ 0.24
TRIM3-215ENST00000639856 RHOXF2Q9BQY4 288 aa16.52■□□□□ 0.24
TRIM3-215ENST00000639856 FUT8Q9BYC5 575 aa16.52■□□□□ 0.24
TRIM3-215ENST00000639856 METTL14Q9HCE5 456 aaKnown RBP16.52■□□□□ 0.24
TRIM3-215ENST00000639856 AIPL1Q9NZN9 384 aa16.52■□□□□ 0.24
TRIM3-215ENST00000639856 WDR64B1ANS9 1081 aa16.52■□□□□ 0.23
TRIM3-215ENST00000639856 SLC16A3O15427 465 aaKnown RBP16.52■□□□□ 0.23
TRIM3-215ENST00000639856 NMT1P30419 496 aaKnown RBP16.52■□□□□ 0.23
TRIM3-215ENST00000639856 KRT76Q01546 638 aa16.52■□□□□ 0.23
TRIM3-215ENST00000639856 APBA1Q02410 837 aa16.52■□□□□ 0.23
TRIM3-215ENST00000639856 SP4Q02446 784 aa16.52■□□□□ 0.23
TRIM3-215ENST00000639856 CKAP4Q07065 602 aaKnown RBP16.52■□□□□ 0.23
TRIM3-215ENST00000639856 UTP14CQ5TAP6 766 aaKnown RBP16.52■□□□□ 0.23
TRIM3-215ENST00000639856 PADI6Q6TGC4 694 aa16.52■□□□□ 0.23
TRIM3-215ENST00000639856 MMS19Q96T76 1030 aa16.52■□□□□ 0.23
TRIM3-215ENST00000639856 IKZF4Q9H2S9 585 aa16.52■□□□□ 0.23
TRIM3-215ENST00000639856 MLXIPQ9HAP2 919 aa16.52■□□□□ 0.23
TRIM3-215ENST00000639856 PARVGQ9HBI0 331 aa16.52■□□□□ 0.23
TRIM3-215ENST00000639856 PLCB1Q9NQ66 1216 aa16.52■□□□□ 0.23
TRIM3-215ENST00000639856 KCND2Q9NZV8 630 aa16.52■□□□□ 0.23
TRIM3-215ENST00000639856 RBPJLQ9UBG7 517 aa16.52■□□□□ 0.23
TRIM3-215ENST00000639856 SEL1LQ9UBV2 794 aa16.52■□□□□ 0.23
TRIM3-215ENST00000639856 PFASO15067 1338 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 TGFB1I1O43294 461 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 EPB41P11171 864 aaKnown RBP16.51■□□□□ 0.23
TRIM3-215ENST00000639856 RARRES1P49788 294 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 JAK3P52333 1124 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 Q3C1V9 767 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 MAEAQ7L5Y9 396 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 FBXO40Q9UH90 709 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 TCEAL9Q9UHQ7 104 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 HIP1RO75146 1068 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 ERLIN1O75477 346 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 MOCS3O95396 460 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 YWHABP31946 246 aaKnown RBP16.51■□□□□ 0.23
TRIM3-215ENST00000639856 ALDH5A1P51649 535 aaPredicted RBP16.51■□□□□ 0.23
TRIM3-215ENST00000639856 ZNF131P52739 623 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 SP2Q02086 613 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 MAPK7Q13164 816 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 RAPGEF1Q13905 1077 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 ZC2HC1CQ53FD0 456 aaPredicted RBP16.51■□□□□ 0.23
TRIM3-215ENST00000639856 KSR1Q8IVT5 923 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 DAW1Q8N136 415 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 SLC10A4Q96EP9 437 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 FIZ1Q96SL8 496 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 ODF2LQ9ULJ1 636 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 SNX12Q9UMY4 172 aa16.51■□□□□ 0.23
TRIM3-215ENST00000639856 ZMYM2Q9UBW7 1377 aa16.5■□□□□ 0.23
TRIM3-215ENST00000639856 SOWAHBA6NEL2 793 aa16.5■□□□□ 0.23
TRIM3-215ENST00000639856 LYPLA2O95372 231 aa16.5■□□□□ 0.23
TRIM3-215ENST00000639856 PRLRP16471 622 aa16.5■□□□□ 0.23
TRIM3-215ENST00000639856 GUCY2CP25092 1073 aa16.5■□□□□ 0.23
TRIM3-215ENST00000639856 SFNP31947 248 aa16.5■□□□□ 0.23
TRIM3-215ENST00000639856 CASP4P49662 377 aa16.5■□□□□ 0.23
TRIM3-215ENST00000639856 PSMC5P62195 406 aa16.5■□□□□ 0.23
TRIM3-215ENST00000639856 MKRN3Q13064 507 aaKnown RBP16.5■□□□□ 0.23
TRIM3-215ENST00000639856 NFIL3Q16649 462 aa16.5■□□□□ 0.23
TRIM3-215ENST00000639856 EXOC3L4Q17RC7 722 aa16.5■□□□□ 0.23
TRIM3-215ENST00000639856 BEND6Q5SZJ8 279 aaPredicted RBP16.5■□□□□ 0.23
TRIM3-215ENST00000639856 PLA2G4FQ68DD2 849 aa16.5■□□□□ 0.23
TRIM3-215ENST00000639856 ZNF746Q6NUN9 644 aaPredicted RBP16.5■□□□□ 0.23
TRIM3-215ENST00000639856 DPY19L2P1Q6NXN4 242 aa16.5■□□□□ 0.23
TRIM3-215ENST00000639856 FASTKD5Q7L8L6 764 aaKnown RBP16.5■□□□□ 0.23
TRIM3-215ENST00000639856 DNERQ8NFT8 737 aa16.5■□□□□ 0.23
TRIM3-215ENST00000639856 CAPZA3Q96KX2 299 aa16.5■□□□□ 0.23
TRIM3-215ENST00000639856 ALS2CR12Q96Q35 445 aa16.5■□□□□ 0.23
TRIM3-215ENST00000639856 DBR1Q9UK59 544 aaKnown RBP16.5■□□□□ 0.23
TRIM3-215ENST00000639856 SPATA31C2B4DYI2 1134 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 BACH1O14867 736 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 CLIC2O15247 247 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 MAFGO15525 162 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 SLC9A1P19634 815 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 DMTNQ08495 405 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 SNAPC2Q13487 334 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 STXBP2Q15833 593 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms