RNA–Protein interactions for RNA: ENST00000639489.1

KCNMA1-262, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-262ENST00000639489 APOBEC3FQ8IUX4 373 aaKnown RBP16.02■□□□□ 0.15
KCNMA1-262ENST00000639489 ABI1Q8IZP0 508 aa16.02■□□□□ 0.15
KCNMA1-262ENST00000639489 CCT6BQ92526 530 aa16.02■□□□□ 0.15
KCNMA1-262ENST00000639489 REEP2Q9BRK0 252 aa16.02■□□□□ 0.15
KCNMA1-262ENST00000639489 KLHL14Q9P2G3 628 aa16.02■□□□□ 0.15
KCNMA1-262ENST00000639489 ANAPC5Q9UJX4 755 aa16.02■□□□□ 0.15
KCNMA1-262ENST00000639489 REREQ9P2R6 1566 aa16.02■□□□□ 0.15
KCNMA1-262ENST00000639489 SAMD7Q7Z3H4 446 aa16.01■□□□□ 0.15
KCNMA1-262ENST00000639489 RSPH3Q86UC2 560 aa16.01■□□□□ 0.15
KCNMA1-262ENST00000639489 LRRC4Q9HBW1 653 aa16.01■□□□□ 0.15
KCNMA1-262ENST00000639489 STK38LQ9Y2H1 464 aa16.01■□□□□ 0.15
KCNMA1-262ENST00000639489 LDHAP00338 332 aaKnown RBP16.01■□□□□ 0.15
KCNMA1-262ENST00000639489 ZNF18P17022 549 aa16.01■□□□□ 0.15
KCNMA1-262ENST00000639489 LIG3P49916 1009 aa16.01■□□□□ 0.15
KCNMA1-262ENST00000639489 APBA1Q02410 837 aa16.01■□□□□ 0.15
KCNMA1-262ENST00000639489 MYO1EQ12965 1108 aa16.01■□□□□ 0.15
KCNMA1-262ENST00000639489 RPUSD2Q8IZ73 545 aaKnown RBP16.01■□□□□ 0.15
KCNMA1-262ENST00000639489 FAM151AQ8WW52 585 aa16.01■□□□□ 0.15
KCNMA1-262ENST00000639489 LIMA1Q9UHB6 759 aaKnown RBP16.01■□□□□ 0.15
KCNMA1-262ENST00000639489 MAD2L2Q9UI95 211 aa16.01■□□□□ 0.15
KCNMA1-262ENST00000639489 ABCD1P33897 745 aa16.01■□□□□ 0.15
KCNMA1-262ENST00000639489 OR6B3Q8NGW1 331 aa16.01■□□□□ 0.15
KCNMA1-262ENST00000639489 PRMT6Q96LA8 375 aaPredicted RBP16.01■□□□□ 0.15
KCNMA1-262ENST00000639489 CAPN11Q9UMQ6 739 aa16.01■□□□□ 0.15
KCNMA1-262ENST00000639489 FTLP02792 175 aaPredicted RBP16■□□□□ 0.15
KCNMA1-262ENST00000639489 COG2Q14746 738 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 DEFB132Q7Z7B7 95 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 PPFIBP2Q8ND30 876 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 NBPF3Q9H094 633 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 DDX47Q9H0S4 455 aaKnown RBP16■□□□□ 0.15
KCNMA1-262ENST00000639489 CD2APQ9Y5K6 639 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 PDS5AQ29RF7 1337 aaKnown RBP16■□□□□ 0.15
KCNMA1-262ENST00000639489 HSPA6P17066 643 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 GBP1P32455 592 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 ATP11AP98196 1134 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 PDZD4Q76G19 769 aaPredicted RBP16■□□□□ 0.15
KCNMA1-262ENST00000639489 ZWILCHQ9H900 591 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 CCDC160A6NGH7 325 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 EIF3CLB5ME19 914 aaKnown RBP16■□□□□ 0.15
KCNMA1-262ENST00000639489 MED7O43513 233 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 TOB1P50616 345 aaPredicted RBP16■□□□□ 0.15
KCNMA1-262ENST00000639489 NNTQ13423 1086 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 ANGEL2Q5VTE6 544 aaKnown RBP16■□□□□ 0.15
KCNMA1-262ENST00000639489 KCTD6Q8NC69 237 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 EIF3CQ99613 913 aaKnown RBP16■□□□□ 0.15
KCNMA1-262ENST00000639489 MTRQ99707 1265 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 C7orf25Q9BPX7 421 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 POLR3FQ9H1D9 316 aaPredicted RBP16■□□□□ 0.15
KCNMA1-262ENST00000639489 SLC38A10Q9HBR0 1119 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 ABT1Q9ULW3 272 aaKnown RBP16■□□□□ 0.15
KCNMA1-262ENST00000639489 CAPN7Q9Y6W3 813 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 ARHGEF28Q8N1W1 1705 aaKnown RBP16■□□□□ 0.15
KCNMA1-262ENST00000639489 NCOA3Q9Y6Q9 1424 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 TROVE2P10155 538 aaKnown RBP eCLIP16■□□□□ 0.15
KCNMA1-262ENST00000639489 YWHABP31946 246 aaKnown RBP16■□□□□ 0.15
KCNMA1-262ENST00000639489 KRT39Q6A163 491 aa16■□□□□ 0.15
KCNMA1-262ENST00000639489 COL23A1Q86Y22 540 aaPredicted RBP16■□□□□ 0.15
KCNMA1-262ENST00000639489 NOVA2Q9UNW9 492 aaKnown RBP16■□□□□ 0.15
KCNMA1-262ENST00000639489 RIMS1Q86UR5 1692 aaKnown RBP16■□□□□ 0.15
KCNMA1-262ENST00000639489 ANO9A1A5B4 782 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 MCF2LO15068 1137 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 ZRANB2O95218 330 aaKnown RBP eCLIP15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 ACSL3O95573 720 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 ATP1A1P05023 1023 aaKnown RBP15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 INHBAP08476 426 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 ACTN1P12814 892 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 DPEP1P16444 411 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 GPC5P78333 572 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 PSMD6Q15008 389 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 ACER1Q8TDN7 264 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 AGBL1Q96MI9 1066 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 SLC4A9Q96Q91 983 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 OSBPL9Q96SU4 736 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 TEX13BQ9BXU2 312 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 INTS2Q9H0H0 1204 aaKnown RBP15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 ZCCHC17Q9NP64 241 aaKnown RBP15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 CTNND1O60716 968 aaKnown RBP15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 CSPG5O95196 566 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 ST3GAL1Q11201 340 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 NR1I3Q14994 352 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 SEC23AQ15436 765 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 BBS9Q3SYG4 887 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 ZC2HC1CQ53FD0 456 aaPredicted RBP15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 PPP6R3Q5H9R7 873 aaPredicted RBP15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 TC2NQ8N9U0 490 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 GIMAP8Q8ND71 665 aaPredicted RBP15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 TCP11Q8WWU5 503 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 PRPSAP2O60256 369 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 ZSCAN20P17040 1043 aaPredicted RBP15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 RNASELQ05823 741 aaKnown RBP15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 SURF1Q15526 300 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 NTRK3Q16288 839 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 TMEM35BQ8NCS4 154 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 FAM167AQ96KS9 214 aa15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 JPH1Q9HDC5 661 aaPredicted RBP15.99■□□□□ 0.15
KCNMA1-262ENST00000639489 PDXKO00764 312 aa15.98■□□□□ 0.15
KCNMA1-262ENST00000639489 CIB2O75838 187 aa15.98■□□□□ 0.15
KCNMA1-262ENST00000639489 SSTR3P32745 418 aaPredicted RBP15.98■□□□□ 0.15
KCNMA1-262ENST00000639489 ECE1P42892 770 aa15.98■□□□□ 0.15
KCNMA1-262ENST00000639489 PDE1BQ01064 536 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms