RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 IGKV6-21A0A0C4DH24 114 aa17.45■□□□□ 0.38
PTPRVP-204ENST00000639439 HOXA2O43364 376 aa17.45■□□□□ 0.38
PTPRVP-204ENST00000639439 LARGE1O95461 756 aa17.45■□□□□ 0.38
PTPRVP-204ENST00000639439 P4HBP07237 508 aaKnown RBP17.45■□□□□ 0.38
PTPRVP-204ENST00000639439 TRIM29Q14134 588 aa17.45■□□□□ 0.38
PTPRVP-204ENST00000639439 EXOC8Q8IYI6 725 aa17.45■□□□□ 0.38
PTPRVP-204ENST00000639439 SLFN12Q8IYM2 578 aa17.45■□□□□ 0.38
PTPRVP-204ENST00000639439 NLRP7Q8WX94 980 aa17.45■□□□□ 0.38
PTPRVP-204ENST00000639439 PPP2R3CQ969Q6 453 aa17.45■□□□□ 0.38
PTPRVP-204ENST00000639439 NECAB3Q96P71 396 aaPredicted RBP17.45■□□□□ 0.38
PTPRVP-204ENST00000639439 CEP89Q96ST8 783 aa17.45■□□□□ 0.38
PTPRVP-204ENST00000639439 GCOM2Q9BZD3 368 aaPredicted RBP17.45■□□□□ 0.38
PTPRVP-204ENST00000639439 PCDHB12Q9Y5F1 795 aa17.45■□□□□ 0.38
PTPRVP-204ENST00000639439 TBKBP1A7MCY6 615 aa17.44■□□□□ 0.38
PTPRVP-204ENST00000639439 EML1O00423 815 aa17.44■□□□□ 0.38
PTPRVP-204ENST00000639439 MAFO75444 373 aaPredicted RBP17.44■□□□□ 0.38
PTPRVP-204ENST00000639439 GATMP50440 423 aa17.44■□□□□ 0.38
PTPRVP-204ENST00000639439 NR5A1Q13285 461 aa17.44■□□□□ 0.38
PTPRVP-204ENST00000639439 EPHA7Q15375 998 aa17.44■□□□□ 0.38
PTPRVP-204ENST00000639439 CSPP1Q1MSJ5 1256 aa17.44■□□□□ 0.38
PTPRVP-204ENST00000639439 SPOUT1Q5T280 376 aaKnown RBP17.44■□□□□ 0.38
PTPRVP-204ENST00000639439 ANO5Q75V66 913 aa17.44■□□□□ 0.38
PTPRVP-204ENST00000639439 ZNF410Q86VK4 478 aa17.44■□□□□ 0.38
PTPRVP-204ENST00000639439 KLHL23Q8NBE8 558 aa17.44■□□□□ 0.38
PTPRVP-204ENST00000639439 NEK9Q8TD19 979 aa17.44■□□□□ 0.38
PTPRVP-204ENST00000639439 HAS1Q92839 578 aa17.44■□□□□ 0.38
PTPRVP-204ENST00000639439 TNFRSF25Q93038 417 aa17.44■□□□□ 0.38
PTPRVP-204ENST00000639439 INO80BQ9C086 356 aaPredicted RBP17.44■□□□□ 0.38
PTPRVP-204ENST00000639439 ALG13Q9NP73 1137 aaKnown RBP17.44■□□□□ 0.38
PTPRVP-204ENST00000639439 DTNBO60941 627 aa17.43■□□□□ 0.38
PTPRVP-204ENST00000639439 SEC24BO95487 1268 aa17.43■□□□□ 0.38
PTPRVP-204ENST00000639439 ITGB1P05556 798 aa17.43■□□□□ 0.38
PTPRVP-204ENST00000639439 EARS2Q5JPH6 523 aaKnown RBP17.43■□□□□ 0.38
PTPRVP-204ENST00000639439 FAM102BQ5T8I3 360 aa17.43■□□□□ 0.38
PTPRVP-204ENST00000639439 POTEDQ86YR6 584 aa17.43■□□□□ 0.38
PTPRVP-204ENST00000639439 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.43■□□□□ 0.38
PTPRVP-204ENST00000639439 SPPL3Q8TCT6 385 aa17.43■□□□□ 0.38
PTPRVP-204ENST00000639439 TMEM117Q9H0C3 514 aa17.43■□□□□ 0.38
PTPRVP-204ENST00000639439 CYP26B1Q9NR63 512 aa17.43■□□□□ 0.38
PTPRVP-204ENST00000639439 CHST12Q9NRB3 414 aa17.43■□□□□ 0.38
PTPRVP-204ENST00000639439 DACT1Q9NYF0 836 aa17.43■□□□□ 0.38
PTPRVP-204ENST00000639439 SUCLA2Q9P2R7 463 aaPredicted RBP17.43■□□□□ 0.38
PTPRVP-204ENST00000639439 FAM50BQ9Y247 325 aa17.43■□□□□ 0.38
PTPRVP-204ENST00000639439 TMEM150BA6NC51 233 aa17.42■□□□□ 0.38
PTPRVP-204ENST00000639439 SFPQP23246 707 aaKnown RBP eCLIP17.42■□□□□ 0.38
PTPRVP-204ENST00000639439 UBE3AQ05086 875 aa17.42■□□□□ 0.38
PTPRVP-204ENST00000639439 DRP2Q13474 957 aa17.42■□□□□ 0.38
PTPRVP-204ENST00000639439 PTCRAQ6ISU1 281 aaPredicted RBP17.42■□□□□ 0.38
PTPRVP-204ENST00000639439 EP400NLQ6ZTU2 488 aa17.42■□□□□ 0.38
PTPRVP-204ENST00000639439 OTUD6AQ7L8S5 288 aa17.42■□□□□ 0.38
PTPRVP-204ENST00000639439 C4orf19Q8IY42 314 aa17.42■□□□□ 0.38
PTPRVP-204ENST00000639439 DIS3L2Q8IYB7 885 aaKnown RBP17.42■□□□□ 0.38
PTPRVP-204ENST00000639439 POF1BQ8WVV4 589 aa17.42■□□□□ 0.38
PTPRVP-204ENST00000639439 SLC7A3Q8WY07 619 aa17.42■□□□□ 0.38
PTPRVP-204ENST00000639439 ZNF668Q96K58 619 aaPredicted RBP17.42■□□□□ 0.38
PTPRVP-204ENST00000639439 CLDND1Q9NY35 253 aa17.42■□□□□ 0.38
PTPRVP-204ENST00000639439 LIMCH1Q9UPQ0 1083 aa17.42■□□□□ 0.38
PTPRVP-204ENST00000639439 A0A0U1RQF3 1178 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 BTBD18B2RXH4 712 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 JAK2O60674 1132 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 EOMESO95936 686 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 FGFR1P11362 822 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 LAG3P18627 525 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 RFC5P40937 340 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 HYAL1Q12794 435 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 CAMK1Q14012 370 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 CTC1Q2NKJ3 1217 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 PLA2G4FQ68DD2 849 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 NCAPH2Q6IBW4 605 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 ECHDC2Q86YB7 292 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 RHPN2Q8IUC4 686 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 ABI1Q8IZP0 508 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 RSPH1Q8WYR4 309 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 CEP170P1Q96L14 293 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 SH2D3AQ9BRG2 576 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 LXNQ9BS40 222 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 ZSWIM4Q9H7M6 989 aa17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 TYW1Q9NV66 732 aaKnown RBP17.41■□□□□ 0.38
PTPRVP-204ENST00000639439 A0A087WZ62 844 aa17.4■□□□□ 0.38
PTPRVP-204ENST00000639439 FAM205CA6NFA0 338 aa17.4■□□□□ 0.38
PTPRVP-204ENST00000639439 GRXCR2A6NFK2 248 aa17.4■□□□□ 0.38
PTPRVP-204ENST00000639439 H3BQ06 376 aaPredicted RBP17.4■□□□□ 0.38
PTPRVP-204ENST00000639439 GAS2O43903 313 aaKnown RBP17.4■□□□□ 0.38
PTPRVP-204ENST00000639439 POLGP54098 1239 aaPredicted RBP17.4■□□□□ 0.38
PTPRVP-204ENST00000639439 NPEPPSP55786 919 aa17.4■□□□□ 0.38
PTPRVP-204ENST00000639439 SPIRE1Q08AE8 756 aa17.4■□□□□ 0.38
PTPRVP-204ENST00000639439 SAFBQ15424 915 aaKnown RBP eCLIP17.4■□□□□ 0.38
PTPRVP-204ENST00000639439 CALCRLQ16602 461 aa17.4■□□□□ 0.38
PTPRVP-204ENST00000639439 LRRC43Q8N309 656 aa17.4■□□□□ 0.38
PTPRVP-204ENST00000639439 FDXACB1Q9BRP7 624 aaPredicted RBP17.4■□□□□ 0.38
PTPRVP-204ENST00000639439 LLPHQ9BRT6 129 aaKnown RBP17.4■□□□□ 0.38
PTPRVP-204ENST00000639439 DHX33Q9H6R0 707 aaKnown RBP17.4■□□□□ 0.38
PTPRVP-204ENST00000639439 PCDHA12Q9UN75 941 aa17.4■□□□□ 0.38
PTPRVP-204ENST00000639439 SKIP12755 728 aa17.39■□□□□ 0.37
PTPRVP-204ENST00000639439 FGFR4P22455 802 aa17.39■□□□□ 0.37
PTPRVP-204ENST00000639439 DNAJB1P25685 340 aa17.39■□□□□ 0.37
PTPRVP-204ENST00000639439 YWHABP31946 246 aaKnown RBP17.39■□□□□ 0.37
PTPRVP-204ENST00000639439 FAM178BQ8IXR5 827 aa17.39■□□□□ 0.37
PTPRVP-204ENST00000639439 THNSL1Q8IYQ7 743 aa17.39■□□□□ 0.37
PTPRVP-204ENST00000639439 COLGALT1Q8NBJ5 622 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms