RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 CYFIP1Q7L576 1253 aa15.52■□□□□ 0.07
SCARB2-216ENST00000639300 CCDC125Q86Z20 511 aa15.52■□□□□ 0.07
SCARB2-216ENST00000639300 FEM1BQ9UK73 627 aa15.52■□□□□ 0.07
SCARB2-216ENST00000639300 TCRBV5S4A2TA0A5A2 114 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 SLC27A3Q5K4L6 730 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 GOLPH3Q9H4A6 298 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 FAM217BQ9NTX9 383 aaPredicted RBP15.51■□□□□ 0.07
SCARB2-216ENST00000639300 PDXKO00764 312 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 PLEKP08567 350 aaPredicted RBP15.51■□□□□ 0.07
SCARB2-216ENST00000639300 PKN1Q16512 942 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 MCPH1Q8NEM0 835 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 GDAP1Q8TB36 358 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 TBC1D31Q96DN5 1066 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 SEL1LQ9UBV2 794 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 SUGT1Q9Y2Z0 365 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 SLC37A4O43826 429 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 INHBAP08476 426 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 PPP4CP60510 307 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 SLMAPQ14BN4 828 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 PSMD6Q15008 389 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 VPS72Q15906 364 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 ZC2HC1CQ53FD0 456 aaPredicted RBP15.51■□□□□ 0.07
SCARB2-216ENST00000639300 SMC1BQ8NDV3 1235 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 PRR12Q9ULL5 1215 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 HMGB1P1B2RPK0 211 aaPredicted RBP15.51■□□□□ 0.07
SCARB2-216ENST00000639300 CLDN3O15551 220 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 UCHL3P15374 230 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 SARNPP82979 210 aaKnown RBP15.51■□□□□ 0.07
SCARB2-216ENST00000639300 SLC18A3Q16572 532 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 LMBRD2Q68DH5 695 aaPredicted RBP15.51■□□□□ 0.07
SCARB2-216ENST00000639300 OR6B2Q6IFH4 312 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 NEURL4Q96JN8 1562 aa15.51■□□□□ 0.07
SCARB2-216ENST00000639300 MYO1CO00159 1063 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 IL9RQ01113 521 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 NFIAQ12857 509 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 RNF25Q96BH1 459 aaPredicted RBP15.5■□□□□ 0.07
SCARB2-216ENST00000639300 HERC5Q9UII4 1024 aaKnown RBP15.5■□□□□ 0.07
SCARB2-216ENST00000639300 FAM205AQ6ZU69 1335 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 A0A087WUV0 522 aaPredicted RBP15.5■□□□□ 0.07
SCARB2-216ENST00000639300 WDR91A4D1P6 747 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 PALM3A6NDB9 673 aaPredicted RBP15.5■□□□□ 0.07
SCARB2-216ENST00000639300 MIF4GDA9UHW6 222 aaKnown RBP15.5■□□□□ 0.07
SCARB2-216ENST00000639300 ZBTB7AO95365 584 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 MYBP10242 640 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 RASSF2P50749 326 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 JAK3P52333 1124 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 KRT76Q01546 638 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 MKRN3Q13064 507 aaKnown RBP15.5■□□□□ 0.07
SCARB2-216ENST00000639300 FRMD5Q7Z6J6 570 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 JPH2Q9BR39 696 aaPredicted RBP15.5■□□□□ 0.07
SCARB2-216ENST00000639300 MIS12Q9H081 205 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 PDS5AQ29RF7 1337 aaKnown RBP15.5■□□□□ 0.07
SCARB2-216ENST00000639300 EXOC1LA0A1B0GW35 172 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 E2F5Q15329 346 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 EPHA7Q15375 998 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 FAM133BQ5BKY9 247 aaKnown RBP15.5■□□□□ 0.07
SCARB2-216ENST00000639300 NSUN6Q8TEA1 469 aaKnown RBP15.5■□□□□ 0.07
SCARB2-216ENST00000639300 MLXIPLQ9NP71 852 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 DUSP10Q9Y6W6 482 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 ERVK-24P63145 666 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 STRIP1Q5VSL9 837 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 ERICH1Q86X53 443 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 THOC1Q96FV9 657 aaKnown RBP15.5■□□□□ 0.07
SCARB2-216ENST00000639300 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.5■□□□□ 0.07
SCARB2-216ENST00000639300 PIM2Q9P1W9 311 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 NOC2LQ9Y3T9 749 aaKnown RBP15.5■□□□□ 0.07
SCARB2-216ENST00000639300 FHOD1Q9Y613 1164 aa15.5■□□□□ 0.07
SCARB2-216ENST00000639300 CNGA1P29973 690 aa15.49■□□□□ 0.07
SCARB2-216ENST00000639300 SSTR3P32745 418 aaPredicted RBP15.49■□□□□ 0.07
SCARB2-216ENST00000639300 MAGOHP61326 146 aaKnown RBP15.49■□□□□ 0.07
SCARB2-216ENST00000639300 SPATA31A5Q5VU36 1347 aa15.49■□□□□ 0.07
SCARB2-216ENST00000639300 SPATA31A7Q8IWB4 1347 aa15.49■□□□□ 0.07
SCARB2-216ENST00000639300 ZWILCHQ9H900 591 aa15.49■□□□□ 0.07
SCARB2-216ENST00000639300 NGRNQ9NPE2 291 aaKnown RBP15.49■□□□□ 0.07
SCARB2-216ENST00000639300 TTC7AQ9ULT0 858 aaPredicted RBP15.49■□□□□ 0.07
SCARB2-216ENST00000639300 A6NJR5 290 aa15.49■□□□□ 0.07
SCARB2-216ENST00000639300 TLR3O15455 904 aaKnown RBP15.49■□□□□ 0.07
SCARB2-216ENST00000639300 CDO1Q16878 200 aa15.49■□□□□ 0.07
SCARB2-216ENST00000639300 NUGGCQ68CJ6 796 aa15.49■□□□□ 0.07
SCARB2-216ENST00000639300 RAB3IL1Q8TBN0 382 aa15.49■□□□□ 0.07
SCARB2-216ENST00000639300 FAM81BQ96LP2 452 aa15.49■□□□□ 0.07
SCARB2-216ENST00000639300 NACA2Q9H009 215 aa15.49■□□□□ 0.07
SCARB2-216ENST00000639300 NYAP2Q9P242 653 aa15.49■□□□□ 0.07
SCARB2-216ENST00000639300 SOX5P35711 763 aa15.49■□□□□ 0.07
SCARB2-216ENST00000639300 MRPS9P82933 396 aaKnown RBP15.49■□□□□ 0.07
SCARB2-216ENST00000639300 EFCAB13Q8IY85 973 aa15.49■□□□□ 0.07
SCARB2-216ENST00000639300 ELAC2Q9BQ52 826 aaKnown RBP15.49■□□□□ 0.07
SCARB2-216ENST00000639300 NBPF3Q9H094 633 aa15.49■□□□□ 0.07
SCARB2-216ENST00000639300 SART1O43290 800 aaKnown RBP15.48■□□□□ 0.07
SCARB2-216ENST00000639300 CA4P22748 312 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 GALCP54803 685 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 EIF3BP55884 814 aaKnown RBP15.48■□□□□ 0.07
SCARB2-216ENST00000639300 KRT39Q6A163 491 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 SH2D3CQ8N5H7 860 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 CCNYQ8ND76 341 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 ZNF564Q8TBZ8 553 aaPredicted RBP15.48■□□□□ 0.07
SCARB2-216ENST00000639300 NUP85Q9BW27 656 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 L2HGDHQ9H9P8 463 aa15.48■□□□□ 0.07
SCARB2-216ENST00000639300 MAGED2Q9UNF1 606 aaPredicted RBP15.48■□□□□ 0.07
SCARB2-216ENST00000639300 NUB1Q9Y5A7 615 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms