RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 CCDC105Q8IYK2 499 aa10.68□□□□□ -0.7
KCNMA1-228ENST00000638223 TAB3Q8N5C8 712 aaPredicted RBP10.68□□□□□ -0.7
KCNMA1-228ENST00000638223 CCDC155Q8N6L0 562 aa10.68□□□□□ -0.7
KCNMA1-228ENST00000638223 KATNAL1Q9BW62 490 aa10.68□□□□□ -0.7
KCNMA1-228ENST00000638223 AGXT2Q9BYV1 514 aa10.68□□□□□ -0.7
KCNMA1-228ENST00000638223 GPRC5CQ9NQ84 441 aa10.68□□□□□ -0.7
KCNMA1-228ENST00000638223 PXMP2Q9NR77 195 aa10.68□□□□□ -0.7
KCNMA1-228ENST00000638223 DNAJC12Q9UKB3 198 aa10.68□□□□□ -0.7
KCNMA1-228ENST00000638223 TRIM17Q9Y577 477 aa10.68□□□□□ -0.7
KCNMA1-228ENST00000638223 HBP1O60381 514 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 CIITAP33076 1130 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 EIF4A3P38919 411 aaKnown RBP10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 VAMP7P51809 220 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 OR6B2Q6IFH4 312 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 PPP1R21Q6ZMI0 780 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 CCDC26Q8TAB7 109 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 ZC3H15Q8WU90 426 aaKnown RBP10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 KLRG1Q96E93 195 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 KIF12Q96FN5 646 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 KIAA1586Q9HCI6 787 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 LRP6O75581 1613 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 ALDH1A1P00352 501 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 CLCN3P51790 818 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 EFNA5P52803 228 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 ERVK-9P63128 1117 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 ERVK-24P63145 666 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 EARS2Q5JPH6 523 aaKnown RBP10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 RGMBQ6NW40 437 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 SCN4BQ8IWT1 228 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 DAGLBQ8NCG7 672 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 BBXQ8WY36 941 aaPredicted RBP10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 MIS12Q9H081 205 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 SLITRK6Q9H5Y7 841 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 TXNDC16Q9P2K2 825 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 MTRF1LQ9UGC7 380 aaKnown RBP10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 MAGEB2O15479 319 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 TOB1P50616 345 aaPredicted RBP10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 GPC3P51654 580 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 ZBED6P86452 979 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 EHHADHQ08426 723 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 PPIL2Q13356 520 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 HADHQ16836 314 aaKnown RBP10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 CCDC77Q9BR77 488 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 TARS2Q9BW92 718 aaKnown RBP10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 PABPN1LA6NDY0 278 aaKnown RBP10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 HUS1O60921 280 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 HSF2BPO75031 334 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 EZRP15311 586 aaKnown RBP10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 CYP2C19P33261 490 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 CLCN1P35523 988 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 IRX5P78411 483 aaPredicted RBP10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 KAZNQ674X7 775 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 ANKRD40Q6AI12 368 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 BEST2Q8NFU1 509 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 PURBQ96QR8 312 aaKnown RBP10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 HAUS4Q9H6D7 363 aa10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 CGNQ9P2M7 1197 aaKnown RBP10.67□□□□□ -0.7
KCNMA1-228ENST00000638223 LMO7Q8WWI1 1683 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 MED24O75448 989 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 MYBP10242 640 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 LY6KQ17RY6 165 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 TMEM270Q6UE05 265 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 TRIM50Q86XT4 487 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 TSNARE1Q96NA8 513 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 FAM107BQ9H098 131 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 FAM169AQ9Y6X4 670 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 RGPD5Q99666 1765 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 RPS6KA5O75582 802 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 OATP04181 439 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 MXD4Q14582 209 aaPredicted RBP10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 LONRF2Q1L5Z9 754 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 IER5Q5VY09 327 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 PASD1Q8IV76 773 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 ACRBPQ8NEB7 543 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 PAIP2Q9BPZ3 127 aaKnown RBP10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 WDR70Q9NW82 654 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 BZW2Q9Y6E2 419 aaKnown RBP10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 EMSYQ7Z589 1322 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 CPT1AP50416 773 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 FXR2P51116 673 aaKnown RBP eCLIP10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 ARID5BQ14865 1188 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 SND1Q7KZF4 910 aaKnown RBP eCLIP10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 TRIM58Q8NG06 486 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 PPP1R14CQ8TAE6 165 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 CEP63Q96MT8 703 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 SSX2IPQ9Y2D8 614 aa10.66□□□□□ -0.7
KCNMA1-228ENST00000638223 ARHGEF37A1IGU5 675 aa10.65□□□□□ -0.7
KCNMA1-228ENST00000638223 TEX33O43247 280 aa10.65□□□□□ -0.7
KCNMA1-228ENST00000638223 EGFRP00533 1210 aa10.65□□□□□ -0.7
KCNMA1-228ENST00000638223 ST3GAL1Q11201 340 aa10.65□□□□□ -0.7
KCNMA1-228ENST00000638223 ZRSR2Q15696 482 aaKnown RBP10.65□□□□□ -0.7
KCNMA1-228ENST00000638223 UAP1Q16222 522 aaPredicted RBP10.65□□□□□ -0.7
KCNMA1-228ENST00000638223 ZNF746Q6NUN9 644 aaPredicted RBP10.65□□□□□ -0.7
KCNMA1-228ENST00000638223 VSTM4Q8IW00 320 aa10.65□□□□□ -0.7
KCNMA1-228ENST00000638223 SIX6OS1Q8N1H7 587 aa10.65□□□□□ -0.7
KCNMA1-228ENST00000638223 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.65□□□□□ -0.7
KCNMA1-228ENST00000638223 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.65□□□□□ -0.7
KCNMA1-228ENST00000638223 NSMCE1Q8WV22 266 aa10.65□□□□□ -0.7
KCNMA1-228ENST00000638223 IQCGQ9H095 443 aaKnown RBP10.65□□□□□ -0.7
KCNMA1-228ENST00000638223 RAB20Q9NX57 234 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms