RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 SCRN1Q12765 414 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 TRAF3IP3Q9Y228 551 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 ARL4DP49703 201 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 SLC10A5Q5PT55 438 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 THOC1Q96FV9 657 aaKnown RBP20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 TMEM161AQ9NX61 479 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 A0A1W2PQ27 194 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 A0A1W2PQ64 194 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 A0A1W2PQD8 194 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 PPP6R3Q5H9R7 873 aaPredicted RBP20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 SYT2Q8N9I0 419 aaPredicted RBP20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 ACTR5Q9H9F9 607 aaPredicted RBP20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 POLR3EQ9NVU0 708 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 ATP11BQ9Y2G3 1177 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 NPC1L1Q9UHC9 1359 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 TSPY1Q01534 308 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 DHX9Q08211 1270 aaKnown RBP20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 SLAIN2Q9P270 581 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 GFAPP14136 432 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 MSTO1Q9BUK6 570 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 GCOM2Q9BZD3 368 aaPredicted RBP20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 PDE8BO95263 885 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 MMS22LQ6ZRQ5 1243 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 YAF2Q8IY57 180 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 SLC35F6Q8N357 371 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 FBXO18Q8NFZ0 1043 aa20.29■□□□□ 0.84
CACNA1A-246ENST00000637736 ADAMTS12P58397 1594 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 TDRD7Q8NHU6 1098 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 NGRNQ9NPE2 291 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 DOLKQ9UPQ8 538 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 COPEO14579 308 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 ATP5HO75947 161 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 WDR47O94967 919 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 SPARCL1Q14515 664 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 C16orf72Q14CZ0 275 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 A0A1B0GW55 424 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 DENND3A2RUS2 1198 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 KDM1AO60341 852 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 DUX4L2P0CJ85 424 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 DUX4L3P0CJ86 424 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 DUX4L4P0CJ87 422 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 DUX4L5P0CJ88 424 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 DUX4L6P0CJ89 424 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 DUX4L7P0CJ90 424 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 TEDDM1Q5T9Z0 273 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 NEK9Q8TD19 979 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 THAP9Q9H5L6 903 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 DNAJC17Q9NVM6 304 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 DUX4Q9UBX2 424 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 PCDHA5Q9Y5H7 936 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 NPM3O75607 178 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 TNFAIP2Q03169 654 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 FAM160B2Q86V87 743 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 ERICH1Q86X53 443 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 NHEJ1Q9H9Q4 299 aaPredicted RBP20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 PDIA3P30101 505 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 TEX2Q8IWB9 1127 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 EFHBQ8N7U6 833 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 TBCKQ8TEA7 893 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 KPNA7A9QM74 516 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 MEIS1O00470 390 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 ZNF189O75820 626 aaPredicted RBP20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 HSPA2P54652 639 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 NFX1Q12986 1120 aaKnown RBP20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 NUDT18Q6ZVK8 323 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 CHMP1BQ7LBR1 199 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 RHOT2Q8IXI1 618 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 ARHGAP26Q9UNA1 814 aa20.28■□□□□ 0.84
CACNA1A-246ENST00000637736 ENAHQ8N8S7 591 aaPredicted RBP20.27■□□□□ 0.84
CACNA1A-246ENST00000637736 EIF3DO15371 548 aaKnown RBP eCLIP20.27■□□□□ 0.84
CACNA1A-246ENST00000637736 JAK3P52333 1124 aa20.27■□□□□ 0.84
CACNA1A-246ENST00000637736 RBL2Q08999 1139 aa20.27■□□□□ 0.84
CACNA1A-246ENST00000637736 TRIM62Q9BVG3 475 aa20.27■□□□□ 0.84
CACNA1A-246ENST00000637736 KRT14P02533 472 aa20.27■□□□□ 0.84
CACNA1A-246ENST00000637736 KDM5DQ9BY66 1539 aa20.27■□□□□ 0.84
CACNA1A-246ENST00000637736 SPDYE5A6NIY4 337 aa20.27■□□□□ 0.84
CACNA1A-246ENST00000637736 SPDYE7PQ495Y7 208 aa20.27■□□□□ 0.84
CACNA1A-246ENST00000637736 PKN3Q6P5Z2 889 aa20.27■□□□□ 0.84
CACNA1A-246ENST00000637736 HEY1Q9Y5J3 304 aa20.27■□□□□ 0.84
CACNA1A-246ENST00000637736 LVRNQ6Q4G3 990 aa20.27■□□□□ 0.84
CACNA1A-246ENST00000637736 NR1H3Q13133 447 aa20.27■□□□□ 0.83
CACNA1A-246ENST00000637736 TOPORSQ9NS56 1045 aaPredicted RBP20.27■□□□□ 0.83
CACNA1A-246ENST00000637736 TMEM63CQ9P1W3 806 aa20.27■□□□□ 0.83
CACNA1A-246ENST00000637736 DIAPH2O60879 1101 aa20.27■□□□□ 0.83
CACNA1A-246ENST00000637736 C1orf146Q5VVC0 180 aa20.27■□□□□ 0.83
CACNA1A-246ENST00000637736 EXOC4Q96A65 974 aa20.27■□□□□ 0.83
CACNA1A-246ENST00000637736 CDC42BPGQ6DT37 1551 aa20.26■□□□□ 0.83
CACNA1A-246ENST00000637736 UBA6A0AVT1 1052 aaPredicted RBP20.26■□□□□ 0.83
CACNA1A-246ENST00000637736 NR5A1Q13285 461 aa20.26■□□□□ 0.83
CACNA1A-246ENST00000637736 PPP1R14AQ96A00 147 aa20.26■□□□□ 0.83
CACNA1A-246ENST00000637736 PDCLQ13371 301 aa20.26■□□□□ 0.83
CACNA1A-246ENST00000637736 LRRC8BQ6P9F7 803 aa20.26■□□□□ 0.83
CACNA1A-246ENST00000637736 ICA1LQ8NDH6 482 aa20.26■□□□□ 0.83
CACNA1A-246ENST00000637736 BBOX1O75936 387 aa20.26■□□□□ 0.83
CACNA1A-246ENST00000637736 GSPT1P15170 499 aaKnown RBP20.26■□□□□ 0.83
CACNA1A-246ENST00000637736 SLC7A5Q01650 507 aa20.26■□□□□ 0.83
CACNA1A-246ENST00000637736 CARD14Q9BXL6 1004 aa20.26■□□□□ 0.83
CACNA1A-246ENST00000637736 CCDC195A0A1B0GUA6 201 aa20.26■□□□□ 0.83
CACNA1A-246ENST00000637736 CAV1Q03135 178 aa20.26■□□□□ 0.83
CACNA1A-246ENST00000637736 LRRC74AQ0VAA2 488 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms