RNA–Protein interactions for RNA: ENST00000637387.1

CTSD-211, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-211ENST00000637387 MRPL44Q9H9J2 332 aaKnown RBP16.89■□□□□ 0.3
CTSD-211ENST00000637387 KAT6AQ92794 2004 aa16.89■□□□□ 0.29
CTSD-211ENST00000637387 NKRFO15226 690 aaKnown RBP eCLIP16.89■□□□□ 0.298e-7■■■□□ 18.5
CTSD-211ENST00000637387 EIF3DO15371 548 aaKnown RBP eCLIP16.89■□□□□ 0.29
CTSD-211ENST00000637387 PRPF6O94906 941 aaKnown RBP16.89■□□□□ 0.29
CTSD-211ENST00000637387 GCNT3O95395 438 aa16.89■□□□□ 0.29
CTSD-211ENST00000637387 LGALS2P05162 132 aa16.89■□□□□ 0.29
CTSD-211ENST00000637387 MMP3P08254 477 aa16.89■□□□□ 0.29
CTSD-211ENST00000637387 XRCC5P13010 732 aaKnown RBP16.89■□□□□ 0.29
CTSD-211ENST00000637387 PLS3P13797 630 aa16.89■□□□□ 0.29
CTSD-211ENST00000637387 CDC25BP30305 580 aa16.89■□□□□ 0.29
CTSD-211ENST00000637387 LRRC63Q05C16 580 aa16.89■□□□□ 0.29
CTSD-211ENST00000637387 PLCB4Q15147 1175 aa16.89■□□□□ 0.29
CTSD-211ENST00000637387 ODR4Q5SWX8 454 aa16.89■□□□□ 0.29
CTSD-211ENST00000637387 ZNF720Q7Z2F6 126 aa16.89■□□□□ 0.29
CTSD-211ENST00000637387 NELFCDQ8IXH7 590 aa16.89■□□□□ 0.29
CTSD-211ENST00000637387 FAM178BQ8IXR5 827 aa16.89■□□□□ 0.29
CTSD-211ENST00000637387 ZC3H3Q8IXZ2 948 aaKnown RBP16.89■□□□□ 0.29
CTSD-211ENST00000637387 ATP8B4Q8TF62 1192 aa16.89■□□□□ 0.29
CTSD-211ENST00000637387 BSNDQ8WZ55 320 aa16.89■□□□□ 0.29
CTSD-211ENST00000637387 DRC1Q96MC2 740 aa16.89■□□□□ 0.29
CTSD-211ENST00000637387 NAP1L5Q96NT1 182 aaPredicted RBP16.89■□□□□ 0.29
CTSD-211ENST00000637387 CRISPLD2Q9H0B8 497 aa16.89■□□□□ 0.29
CTSD-211ENST00000637387 UBE4BO95155 1302 aa16.88■□□□□ 0.29
CTSD-211ENST00000637387 SLC34A2O95436 690 aa16.88■□□□□ 0.29
CTSD-211ENST00000637387 MARK3P27448 753 aa16.88■□□□□ 0.29
CTSD-211ENST00000637387 NCKAP1LP55160 1127 aa16.88■□□□□ 0.29
CTSD-211ENST00000637387 TRIM32Q13049 653 aa16.88■□□□□ 0.29
CTSD-211ENST00000637387 EMC2Q15006 297 aa16.88■□□□□ 0.29
CTSD-211ENST00000637387 ZC2HC1CQ53FD0 456 aaPredicted RBP16.88■□□□□ 0.29
CTSD-211ENST00000637387 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.88■□□□□ 0.29
CTSD-211ENST00000637387 CSGALNACT2Q8N6G5 542 aa16.88■□□□□ 0.29
CTSD-211ENST00000637387 TRPV1Q8NER1 839 aa16.88■□□□□ 0.29
CTSD-211ENST00000637387 BBXQ8WY36 941 aaPredicted RBP16.88■□□□□ 0.29
CTSD-211ENST00000637387 FAM167AQ96KS9 214 aa16.88■□□□□ 0.29
CTSD-211ENST00000637387 C16orf70Q9BSU1 422 aa16.88■□□□□ 0.29
CTSD-211ENST00000637387 SRRTQ9BXP5 876 aaKnown RBP16.88■□□□□ 0.29
CTSD-211ENST00000637387 IKZF4Q9H2S9 585 aa16.88■□□□□ 0.29
CTSD-211ENST00000637387 THAP9Q9H5L6 903 aa16.88■□□□□ 0.29
CTSD-211ENST00000637387 AZI2Q9H6S1 392 aa16.88■□□□□ 0.29
CTSD-211ENST00000637387 ATP6V0A4Q9HBG4 840 aa16.88■□□□□ 0.29
CTSD-211ENST00000637387 MAPTP10636 758 aaKnown RBP16.87■□□□□ 0.29
CTSD-211ENST00000637387 CYBAP13498 195 aa16.87■□□□□ 0.29
CTSD-211ENST00000637387 TNFAIP2Q03169 654 aa16.87■□□□□ 0.29
CTSD-211ENST00000637387 KNOP1Q1ED39 458 aaKnown RBP16.87■□□□□ 0.29
CTSD-211ENST00000637387 FAM102BQ5T8I3 360 aa16.87■□□□□ 0.29
CTSD-211ENST00000637387 MAP3K21Q5TCX8 1036 aa16.87■□□□□ 0.29
CTSD-211ENST00000637387 KSR1Q8IVT5 923 aa16.87■□□□□ 0.29
CTSD-211ENST00000637387 OR6J1Q8NGC5 347 aa16.87■□□□□ 0.29
CTSD-211ENST00000637387 GLG1Q92896 1179 aa16.87■□□□□ 0.29
CTSD-211ENST00000637387 DEFB118Q96PH6 123 aa16.87■□□□□ 0.29
CTSD-211ENST00000637387 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.87■□□□□ 0.293e-9■■■■■ 28.2
CTSD-211ENST00000637387 ST6GALNAC4Q9H4F1 302 aa16.87■□□□□ 0.29
CTSD-211ENST00000637387 SMARCAD1Q9H4L7 1026 aa16.87■□□□□ 0.29
CTSD-211ENST00000637387 LARSQ9P2J5 1176 aaKnown RBP16.87■□□□□ 0.29
CTSD-211ENST00000637387 LIMA1Q9UHB6 759 aaKnown RBP16.87■□□□□ 0.29
CTSD-211ENST00000637387 ADGRA3Q8IWK6 1321 aa16.86■□□□□ 0.29
CTSD-211ENST00000637387 A0A1B0GTH6 734 aa16.86■□□□□ 0.29
CTSD-211ENST00000637387 KCNJ18B7U540 433 aa16.86■□□□□ 0.29
CTSD-211ENST00000637387 TGFB1I1O43294 461 aa16.86■□□□□ 0.29
CTSD-211ENST00000637387 ZNF286BP0CG31 522 aa16.86■□□□□ 0.29
CTSD-211ENST00000637387 SLC26A2P50443 739 aa16.86■□□□□ 0.29
CTSD-211ENST00000637387 RTP1P59025 263 aa16.86■□□□□ 0.29
CTSD-211ENST00000637387 IRX5P78411 483 aaPredicted RBP16.86■□□□□ 0.29
CTSD-211ENST00000637387 KCNJ12Q14500 433 aa16.86■□□□□ 0.29
CTSD-211ENST00000637387 KRT31Q15323 416 aa16.86■□□□□ 0.29
CTSD-211ENST00000637387 TPD52L1Q16890 204 aaPredicted RBP16.86■□□□□ 0.29
CTSD-211ENST00000637387 TCP11X2Q5H9J9 407 aa16.86■□□□□ 0.29
CTSD-211ENST00000637387 MCPH1Q8NEM0 835 aa16.86■□□□□ 0.29
CTSD-211ENST00000637387 EEF2KMTQ96G04 330 aa16.86■□□□□ 0.29
CTSD-211ENST00000637387 TRAF3IP3Q9Y228 551 aa16.86■□□□□ 0.29
CTSD-211ENST00000637387 IGKV6-21A0A0C4DH24 114 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 K7ENM7 598 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 POLGP54098 1239 aaPredicted RBP16.85■□□□□ 0.29
CTSD-211ENST00000637387 UBASH3AP57075 661 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 EDRF1Q3B7T1 1238 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 NOC3LQ8WTT2 800 aaKnown RBP16.85■□□□□ 0.29
CTSD-211ENST00000637387 KIFAP3Q92845 792 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 POLR3FQ9H1D9 316 aaPredicted RBP16.85■□□□□ 0.29
CTSD-211ENST00000637387 RNPEPQ9H4A4 650 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 NRBP2Q9NSY0 501 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 PPME1Q9Y570 386 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 TRIP12Q14669 1992 aaPredicted RBP16.85■□□□□ 0.29
CTSD-211ENST00000637387 SCN10AQ9Y5Y9 1956 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 LRRC10BA6NIK2 292 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 A6NJR5 290 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 PDXKO00764 312 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 MAFO75444 373 aaPredicted RBP16.85■□□□□ 0.29
CTSD-211ENST00000637387 KIF20AO95235 890 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 SERPINC1P01008 464 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 RFC5P40937 340 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 NPTX2P47972 431 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 PEX3P56589 373 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 GTF2BQ00403 316 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 SPAG1Q07617 926 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 PPP4R3CPQ6ZMV5 832 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 TLK2Q86UE8 772 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 ASAP3Q8TDY4 903 aa16.85■□□□□ 0.29
CTSD-211ENST00000637387 CNOT6LQ96LI5 555 aaKnown RBP16.85■□□□□ 0.29
CTSD-211ENST00000637387 KIFC3Q9BVG8 833 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms