RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 PPP1R12CQ9BZL4 782 aa17.76■□□□□ 0.43
CLN6-216ENST00000636876 KBTBD4Q9NVX7 518 aa17.76■□□□□ 0.43
CLN6-216ENST00000636876 SERTAD1Q9UHV2 236 aa17.76■□□□□ 0.43
CLN6-216ENST00000636876 COLQQ9Y215 455 aaPredicted RBP17.76■□□□□ 0.43
CLN6-216ENST00000636876 UMODL1Q5DID0 1318 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 GOLGA6L22H0YM25 854 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 CTSHP09668 335 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 SELPP16109 830 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 CYP2C18P33260 490 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 ARL2P36404 184 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 MRPS6P82932 125 aaKnown RBP17.75■□□□□ 0.43
CLN6-216ENST00000636876 FAM160A1Q05DH4 1040 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 FAM26DQ5JW98 314 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 ZNF618Q5T7W0 954 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 FAM102BQ5T8I3 360 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 TRAF7Q6Q0C0 670 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 MAEAQ7L5Y9 396 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 CEP57L1Q8IYX8 460 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 FMR1NBQ8N0W7 255 aaPredicted RBP17.75■□□□□ 0.43
CLN6-216ENST00000636876 ENGASEQ8NFI3 743 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 PRPF31Q8WWY3 499 aaKnown RBP17.75■□□□□ 0.43
CLN6-216ENST00000636876 POLR3FQ9H1D9 316 aaPredicted RBP17.75■□□□□ 0.43
CLN6-216ENST00000636876 TNMDQ9H2S6 317 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 GPRC5CQ9NQ84 441 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 PRKAG2Q9UGJ0 569 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 NR2E3Q9Y5X4 410 aa17.75■□□□□ 0.43
CLN6-216ENST00000636876 NPHP3-ACAD11A0A0J9YXS1 232 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 MYMKA6NI61 221 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 H0YGN5 161 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 ZNF202O95125 648 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 TIMP1P01033 207 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 RAG1P15918 1043 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 LIG1P18858 919 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 MGAT3Q09327 533 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 TMEM62Q0P6H9 643 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 MAPK7Q13164 816 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 LONRF3Q496Y0 759 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 LRRC8DQ7L1W4 858 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 DAW1Q8N136 415 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 ZNF710Q8N1W2 664 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 KIFAP3Q92845 792 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 WNT8AQ9H1J5 351 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 LMBRD1Q9NUN5 540 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 ZMYND8Q9ULU4 1186 aaPredicted RBP17.74■□□□□ 0.43
CLN6-216ENST00000636876 COL4A3BPQ9Y5P4 624 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 TRPV2Q9Y5S1 764 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 CDY2AQ9Y6F7 541 aa17.74■□□□□ 0.43
CLN6-216ENST00000636876 RSPH10B2B2RC85 870 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 M0QZ92 97 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 ASAP2O43150 1006 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 HIP1RO75146 1068 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 CHRNA1P02708 482 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 KRT18P05783 430 aaKnown RBP17.73■□□□□ 0.43
CLN6-216ENST00000636876 RSPH10BP0C881 870 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 ITGB8P26012 769 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 GPC3P51654 580 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 CCL23P55773 120 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 NLRP11P59045 1033 aaKnown RBP17.73■□□□□ 0.43
CLN6-216ENST00000636876 CDC42EP1Q00587 391 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 AMPD3Q01432 767 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 RAD51AP2Q09MP3 1159 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 LAMTOR4Q0VGL1 99 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 SNW1Q13573 536 aaKnown RBP17.73■□□□□ 0.43
CLN6-216ENST00000636876 MXD4Q14582 209 aaPredicted RBP17.73■□□□□ 0.43
CLN6-216ENST00000636876 RHPN2Q8IUC4 686 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 ASAP3Q8TDY4 903 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 DDX12PQ92771 950 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 STAMQ92783 540 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 DRC1Q96MC2 740 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 PPP1R16BQ96T49 567 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 REEP2Q9BRK0 252 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 CELF4Q9BZC1 486 aaKnown RBP17.73■□□□□ 0.43
CLN6-216ENST00000636876 LRRC27Q9C0I9 530 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 ADAMTS10Q9H324 1103 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 POLD4Q9HCU8 107 aa17.73■□□□□ 0.43
CLN6-216ENST00000636876 TANC1Q9C0D5 1861 aa17.72■□□□□ 0.43
CLN6-216ENST00000636876 GPR32O75388 356 aa17.72■□□□□ 0.43
CLN6-216ENST00000636876 NR1I2O75469 434 aa17.72■□□□□ 0.43
CLN6-216ENST00000636876 IQCF3P0C7M6 154 aa17.72■□□□□ 0.43
CLN6-216ENST00000636876 SYN1P17600 705 aa17.72■□□□□ 0.43
CLN6-216ENST00000636876 GLRA2P23416 452 aa17.72■□□□□ 0.43
CLN6-216ENST00000636876 GIT2Q14161 759 aa17.72■□□□□ 0.43
CLN6-216ENST00000636876 KIZQ2M2Z5 673 aa17.72■□□□□ 0.43
CLN6-216ENST00000636876 KRBA2Q6ZNG9 492 aa17.72■□□□□ 0.43
CLN6-216ENST00000636876 DYMQ7RTS9 669 aa17.72■□□□□ 0.43
CLN6-216ENST00000636876 KSR1Q8IVT5 923 aa17.72■□□□□ 0.43
CLN6-216ENST00000636876 CNNM3Q8NE01 707 aa17.72■□□□□ 0.43
CLN6-216ENST00000636876 DNAJC19Q96DA6 116 aa17.72■□□□□ 0.43
CLN6-216ENST00000636876 CDHR5Q9HBB8 845 aa17.72■□□□□ 0.43
CLN6-216ENST00000636876 ODF2LQ9ULJ1 636 aa17.72■□□□□ 0.43
CLN6-216ENST00000636876 RANBP2P49792 3224 aaKnown RBP17.72■□□□□ 0.43
CLN6-216ENST00000636876 PARNO95453 639 aaKnown RBP17.71■□□□□ 0.43
CLN6-216ENST00000636876 AFMP43652 599 aa17.71■□□□□ 0.43
CLN6-216ENST00000636876 CRYBB1P53674 252 aaPredicted RBP17.71■□□□□ 0.43
CLN6-216ENST00000636876 CACNB1Q02641 598 aaPredicted RBP17.71■□□□□ 0.43
CLN6-216ENST00000636876 CAPSQ13938 189 aa17.71■□□□□ 0.43
CLN6-216ENST00000636876 MBTPS1Q14703 1052 aa17.71■□□□□ 0.43
CLN6-216ENST00000636876 MFSD5Q6N075 450 aa17.71■□□□□ 0.43
CLN6-216ENST00000636876 CNNM4Q6P4Q7 775 aa17.71■□□□□ 0.43
CLN6-216ENST00000636876 ZNF410Q86VK4 478 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms