RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 PADI3Q9ULW8 664 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 COL4A3BPQ9Y5P4 624 aa9.14□□□□□ -0.95
PNKP-226ENST00000636840 A0A087WWV3 80 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 A0A087WZ62 844 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 TMEM150BA6NC51 233 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 ENPP3O14638 875 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 USO1O60763 962 aaKnown RBP9.13□□□□□ -0.95
PNKP-226ENST00000636840 PPP6R2O75170 966 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 GPR32O75388 356 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 SSBP05455 408 aaKnown RBP eCLIP9.13□□□□□ -0.95
PNKP-226ENST00000636840 SRGAP2CP0DJJ0 459 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 DARSP14868 501 aaKnown RBP9.13□□□□□ -0.95
PNKP-226ENST00000636840 CYP11B2P19099 503 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 NCLP19338 710 aaKnown RBP9.13□□□□□ -0.95
PNKP-226ENST00000636840 SFPQP23246 707 aaKnown RBP eCLIP9.13□□□□□ -0.95
PNKP-226ENST00000636840 CDC25AP30304 524 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 PHKA2P46019 1235 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 NASPP49321 788 aaPredicted RBP9.13□□□□□ -0.95
PNKP-226ENST00000636840 GPC3P51654 580 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 POU5F1BQ06416 359 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 LAMTOR4Q0VGL1 99 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 MBTPS1Q14703 1052 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 PCBP1Q15365 356 aaKnown RBP eCLIP9.13□□□□□ -0.95
PNKP-226ENST00000636840 IL17AQ16552 155 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 HYIQ5T013 277 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 FAM102BQ5T8I3 360 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 POTEGQ6S5H5 508 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 MYOCDQ8IZQ8 938 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 LINC01465Q8N7H1 131 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 ZNF579Q8NAF0 562 aaKnown RBP9.13□□□□□ -0.95
PNKP-226ENST00000636840 LINC00301Q8NCQ3 95 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 KCNG4Q8TDN1 519 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 KIFAP3Q92845 792 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 TMEM143Q96AN5 459 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 NLRP4Q96MN2 994 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 CEP89Q96ST8 783 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 PPP1R16BQ96T49 567 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 FDXACB1Q9BRP7 624 aaPredicted RBP9.13□□□□□ -0.95
PNKP-226ENST00000636840 TIPINQ9BVW5 301 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 CCSER1Q9C0I3 900 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 BHMT2Q9H2M3 363 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 ADAMTS10Q9H324 1103 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 SLC28A3Q9HAS3 691 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 CDHR5Q9HBB8 845 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 C1orf112Q9NSG2 853 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 BMP2KQ9NSY1 1161 aaPredicted RBP9.13□□□□□ -0.95
PNKP-226ENST00000636840 DACT1Q9NYF0 836 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 CXXC1Q9P0U4 656 aaPredicted RBP9.13□□□□□ -0.95
PNKP-226ENST00000636840 PCDH10Q9P2E7 1040 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 LRFN2Q9ULH4 789 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 ST3GAL5Q9UNP4 418 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 NOC2LQ9Y3T9 749 aaKnown RBP9.13□□□□□ -0.95
PNKP-226ENST00000636840 INSL6Q9Y581 213 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 PCDHA11Q9Y5I1 949 aa9.13□□□□□ -0.95
PNKP-226ENST00000636840 MORC2Q9Y6X9 1032 aaPredicted RBP9.13□□□□□ -0.95
PNKP-226ENST00000636840 WDR81Q562E7 1941 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 TMEM265A0A087WTH1 108 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 PP2D1A8MPX8 630 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 E9PMD0 336 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 TLL1O43897 1013 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 CUTAO60888 179 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 BRD1O95696 1058 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 SKIP12755 728 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 DDIT3P35638 169 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 WDR5P61964 334 aaKnown RBP9.12□□□□□ -0.95
PNKP-226ENST00000636840 KRT85P78386 507 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 PTPAQ15257 358 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 FOXD4L6Q3SYB3 417 aaPredicted RBP9.12□□□□□ -0.95
PNKP-226ENST00000636840 FOXD4L3Q6VB84 417 aaPredicted RBP9.12□□□□□ -0.95
PNKP-226ENST00000636840 CCDC73Q6ZRK6 1079 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 MAEAQ7L5Y9 396 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 CATSPER4Q7RTX7 472 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 ZBTB8OSQ8IWT0 167 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 RNF149Q8NC42 400 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 RAD9AQ99638 391 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 LRRC27Q9C0I9 530 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 CSRNP2Q9H175 543 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 C2orf40Q9H1Z8 148 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 AGO3Q9H9G7 860 aaKnown RBP9.12□□□□□ -0.95
PNKP-226ENST00000636840 CHST12Q9NRB3 414 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 KCND2Q9NZV8 630 aa9.12□□□□□ -0.95
PNKP-226ENST00000636840 TET1Q8NFU7 2136 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 LTBP2Q14767 1821 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 ERLIN2O94905 339 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 UPP2O95045 317 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 KRT18P05783 430 aaKnown RBP9.11□□□□□ -0.95
PNKP-226ENST00000636840 PLA2G4BP0C869 781 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 AXLP30530 894 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 ARL2P36404 184 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 ME1P48163 572 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 SMTNP53814 917 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 GRB10Q13322 594 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 MKRN4PQ13434 485 aaPredicted RBP9.11□□□□□ -0.95
PNKP-226ENST00000636840 DRP2Q13474 957 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 ECM1Q16610 540 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 ZNF697Q5TEC3 545 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 RRAGBQ5VZM2 374 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 FAM109BQ6ICB4 259 aaPredicted RBP9.11□□□□□ -0.95
PNKP-226ENST00000636840 SLC24A5Q71RS6 500 aa9.11□□□□□ -0.95
PNKP-226ENST00000636840 SV2BQ7L1I2 683 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms