RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 FOXN3O00409 490 aaPredicted RBP15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 SLC20A2Q08357 652 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 PTGISQ16647 500 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 NT5DC3Q86UY8 548 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 NLRP14Q86W24 1093 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 WHAMMQ8TF30 809 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 SCFD2Q8WU76 684 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 PRR12Q9ULL5 1215 aa15.25■□□□□ 0.03
CACNA1A-228ENST00000636610 PHF20L1A8MW92 1017 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 TOM1O60784 492 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 ARP10275 920 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 MNAT1P51948 309 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 GTF2A1P52655 376 aaPredicted RBP15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 QPCTQ16769 361 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 MYCBPAPQ8TBZ2 947 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 CTNNBL1Q8WYA6 563 aaPredicted RBP15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 CCDC113Q9H0I3 377 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 MYO3BQ8WXR4 1341 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 PITPNM2Q9BZ72 1349 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 GAS7O60861 476 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 TNFAIP3P21580 790 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 GCLMP48507 274 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 FMO5P49326 533 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 ITGB3BPQ13352 177 aaPredicted RBP15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 DCAF12L1Q5VU92 463 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 PPP4R3CPQ6ZMV5 832 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 EPM2AIP1Q7L775 607 aaPredicted RBP15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 CCDC17Q96LX7 622 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 CRAMP1Q96RY5 1269 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 EPN3Q9H201 632 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 HOMER2Q9NSB8 354 aa15.24■□□□□ 0.03
CACNA1A-228ENST00000636610 F8VZ95 297 aa15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 SHBGP04278 402 aa15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 HOXA10P31260 410 aaPredicted RBP15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 PSMC2P35998 433 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 SKOR1P84550 965 aa15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 NSMFQ6X4W1 530 aa15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 KDM7AQ6ZMT4 941 aa15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 ALG3Q92685 438 aa15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 PARVGQ9HBI0 331 aa15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 UBE2TQ9NPD8 197 aaPredicted RBP15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 PLCB1Q9NQ66 1216 aa15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 CTTNBP2NLQ9P2B4 639 aa15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 TMEM59LQ9UK28 342 aa15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 COG5Q9UP83 839 aa15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 CCDC25Q86WR0 208 aa15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 KRT35Q92764 455 aa15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 PRMT6Q96LA8 375 aaPredicted RBP15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 TMBIM4Q9HC24 238 aa15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 DNAJC17Q9NVM6 304 aaKnown RBP15.23■□□□□ 0.03
CACNA1A-228ENST00000636610 CYP3A7-CYP3A51PA0A087WV96 503 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 CYP3A7P24462 503 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 SOX5P35711 763 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 SREBF1P36956 1147 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 HSPA9P38646 679 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 MESDQ14696 234 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 SPRED3Q2MJR0 410 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 PHLDB3Q6NSJ2 640 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 C18orf8Q96DM3 657 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 PBKQ96KB5 322 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 GJD4Q96KN9 370 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 FRMD4BQ9Y2L6 1034 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 PPP1R12BO60237 982 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 SORBS3O60504 671 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 EYA4O95677 639 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 MMP10P09238 476 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 TNFRSF8P28908 595 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 KCNJ1P48048 391 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 IFI16Q16666 785 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 AOC3Q16853 763 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 RBM26Q5T8P6 1007 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 HS2ST1Q7LGA3 356 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 SELENOSQ9BQE4 189 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 INTS2Q9H0H0 1204 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 UTP11Q9Y3A2 253 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 ZMYM2Q9UBW7 1377 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 AHDC1Q5TGY3 1603 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 HGSO14964 777 aaPredicted RBP15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 CLSTN1O94985 981 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 CHRNA5P30532 468 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 AP3B2Q13367 1082 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 CCDC38Q502W7 563 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 C2CD6Q53TS8 623 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 OTOP1Q7RTM1 612 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 DCAF4Q8WV16 495 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 CCDC127Q96BQ5 260 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 NYAP2Q9P242 653 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 PNMA2Q9UL42 364 aa15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 BZW2Q9Y6E2 419 aaKnown RBP15.22■□□□□ 0.03
CACNA1A-228ENST00000636610 FOXO6A8MYZ6 492 aa15.21■□□□□ 0.03
CACNA1A-228ENST00000636610 JAM2P57087 298 aa15.21■□□□□ 0.03
CACNA1A-228ENST00000636610 DGKZQ13574 1117 aa15.21■□□□□ 0.03
CACNA1A-228ENST00000636610 ICE2Q659A1 982 aa15.21■□□□□ 0.03
CACNA1A-228ENST00000636610 HHIPL2Q6UWX4 724 aa15.21■□□□□ 0.03
CACNA1A-228ENST00000636610 CPXCR1Q8N123 301 aa15.21■□□□□ 0.03
CACNA1A-228ENST00000636610 ACTRT1Q8TDG2 376 aa15.21■□□□□ 0.03
CACNA1A-228ENST00000636610 CRYGNQ8WXF5 182 aa15.21■□□□□ 0.03
CACNA1A-228ENST00000636610 GLIS2Q9BZE0 524 aaPredicted RBP15.21■□□□□ 0.03
CACNA1A-228ENST00000636610 METTL14Q9HCE5 456 aaKnown RBP15.21■□□□□ 0.03
CACNA1A-228ENST00000636610 TCRBV7S2A1N4TA0A589 114 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms