RNA–Protein interactions for RNA: ENST00000636238.1

CIITA-214, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-214ENST00000636238 FDPSP14324 419 aaKnown RBP8.37□□□□□ -1.07
CIITA-214ENST00000636238 AOC1P19801 751 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 ERVFC1P60507 584 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 GUCY1B3Q02153 619 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 SMC1AQ14683 1233 aaKnown RBP8.37□□□□□ -1.07
CIITA-214ENST00000636238 RTN1Q16799 776 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 ATAT1Q5SQI0 421 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 KIAA1841Q6NSI8 718 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 FRMD5Q7Z6J6 570 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 CATIPQ7Z7H3 387 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 CCDC82Q8N4S0 544 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 MRPL43Q8N983 215 aaKnown RBP8.37□□□□□ -1.07
CIITA-214ENST00000636238 FAM184AQ8NB25 1140 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 PHKBQ93100 1093 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 ACSF2Q96CM8 615 aaPredicted RBP8.37□□□□□ -1.07
CIITA-214ENST00000636238 RRP36Q96EU6 259 aaKnown RBP8.37□□□□□ -1.07
CIITA-214ENST00000636238 ZNF558Q96NG5 402 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 MRPL9Q9BYD2 267 aaKnown RBP8.37□□□□□ -1.07
CIITA-214ENST00000636238 RHOBTB2Q9BYZ6 727 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 FAM49AQ9H0Q0 323 aaPredicted RBP8.37□□□□□ -1.07
CIITA-214ENST00000636238 TMX1Q9H3N1 280 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 JADE2Q9NQC1 790 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 RTN4Q9NQC3 1192 aaKnown RBP8.37□□□□□ -1.07
CIITA-214ENST00000636238 ENTPD7Q9NQZ7 604 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 TYW1Q9NV66 732 aaKnown RBP8.37□□□□□ -1.07
CIITA-214ENST00000636238 RTEL1Q9NZ71 1219 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 SPG21Q9NZD8 308 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 SLC9A2Q9UBY0 812 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 SEC63Q9UGP8 760 aaKnown RBP8.37□□□□□ -1.07
CIITA-214ENST00000636238 MTMR6Q9Y217 621 aa8.37□□□□□ -1.07
CIITA-214ENST00000636238 C2CD4DB7Z1M9 353 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 MEIS2O14770 477 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 CYTH3O43739 400 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 HBP1O60381 514 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 DDAH1O94760 285 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 ATG7O95352 703 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 BAG4O95429 457 aaKnown RBP8.36□□□□□ -1.07
CIITA-214ENST00000636238 PDGFBP01127 241 aaPredicted RBP8.36□□□□□ -1.07
CIITA-214ENST00000636238 ITGB5P18084 799 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 SDHBP21912 280 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 MARK3P27448 753 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 STAT5BP51692 787 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 CRYBB1P53674 252 aaPredicted RBP8.36□□□□□ -1.07
CIITA-214ENST00000636238 POLGP54098 1239 aaPredicted RBP8.36□□□□□ -1.07
CIITA-214ENST00000636238 SP4Q02446 784 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 PUM1Q14671 1186 aaKnown RBP eCLIP8.36□□□□□ -1.07
CIITA-214ENST00000636238 PLCB4Q15147 1175 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 NTRK3Q16288 839 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 SLC35G1Q2M3R5 365 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 ZNF484Q5JVG2 852 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 ZC3H14Q6PJT7 736 aaKnown RBP8.36□□□□□ -1.07
CIITA-214ENST00000636238 MTHFD1LQ6UB35 978 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 KCNT2Q6UVM3 1135 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 CYP26C1Q6V0L0 522 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 OTOP3Q7RTS5 596 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 PPFIBP1Q86W92 1011 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 FANCBQ8NB91 859 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 AIFM3Q96NN9 605 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 ADAM2Q99965 735 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 SDF4Q9BRK5 362 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 SLC26A6Q9BXS9 759 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 CWH43Q9H720 699 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 CYP26B1Q9NR63 512 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 ORC3Q9UBD5 711 aaPredicted RBP8.36□□□□□ -1.07
CIITA-214ENST00000636238 PCDHGC5Q9Y5F6 944 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 HCFC2Q9Y5Z7 792 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 MYO15AQ9UKN7 3530 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 NLRC5Q86WI3 1866 aa8.36□□□□□ -1.07
CIITA-214ENST00000636238 EP300Q09472 2414 aaPredicted RBP8.35□□□□□ -1.07
CIITA-214ENST00000636238 IGKV6D-21A0A0A0MT36 114 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 hCG_1642624A0A1W2PR95 340 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 C2orf71A6NGG8 1288 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 SPDYE3A6NKU9 549 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 H3BQV1 296 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 ATP9AO75110 1047 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 CSPG5O95196 566 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 PLEKHA8P1O95397 391 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 EOMESO95936 686 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 F13A1P00488 732 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 C1RP00736 705 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 LMNAP02545 664 aaKnown RBP8.35□□□□□ -1.07
CIITA-214ENST00000636238 MCM4P33991 863 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 IGBP1P78318 339 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 HMGN5P82970 282 aaKnown RBP8.35□□□□□ -1.07
CIITA-214ENST00000636238 SSRP1Q08945 709 aaKnown RBP8.35□□□□□ -1.07
CIITA-214ENST00000636238 NFX1Q12986 1120 aaKnown RBP8.35□□□□□ -1.07
CIITA-214ENST00000636238 TDGQ13569 410 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 DSC3Q14574 896 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 NONOQ15233 471 aaKnown RBP eCLIP8.35□□□□□ -1.07
CIITA-214ENST00000636238 PLPP4Q5VZY2 271 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 FAM160B1Q5W0V3 765 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 MCTP1Q6DN14 999 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 CPLX2Q6PUV4 134 aaKnown RBP8.35□□□□□ -1.07
CIITA-214ENST00000636238 USP17L6PQ6QN14 398 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 NIPA1Q7RTP0 329 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 DGLUCYQ7Z3D6 616 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 TMC7Q7Z402 723 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 FERMT3Q86UX7 667 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 KIAA0319LQ8IZA0 1049 aa8.35□□□□□ -1.07
CIITA-214ENST00000636238 ABI1Q8IZP0 508 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms