RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 WDR13Q9H1Z4 485 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 RASSF4Q9H2L5 321 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 TRIT1Q9H3H1 467 aaKnown RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 C12orf65Q9H3J6 166 aaKnown RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 GSTO2Q9H4Y5 243 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 MRPL44Q9H9J2 332 aaKnown RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 MAGEE1Q9HCI5 957 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 GPATCH2Q9NW75 528 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 ZMYM5Q9UJ78 669 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 DBR1Q9UK59 544 aaKnown RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 POMT2Q9UKY4 750 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 TPX2Q9ULW0 747 aaKnown RBP-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 PCDHB11Q9Y5F2 797 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 PCDHGB1Q9Y5G3 927 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 MALRD1Q5VYJ5 2156 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 AOX1Q06278 1338 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 LPAP08519 4548 aa-0.66□□□□□ -2.52
CDKL5-210ENST00000636046 DOCK7Q96N67 2140 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 BIRC6Q9NR09 4857 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 NSD2O96028 1365 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 COL15A1P39059 1388 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 STAB2Q8WWQ8 2551 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 WTIPA6NIX2 430 aaPredicted RBP-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 B4DGG1 531 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 H0Y9J4 135 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 SLC33A1O00400 549 aaPredicted RBP-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 PPP6CO00743 305 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 CDK2AP1O14519 115 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 FCHO1O14526 889 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 EIF4EBP3O60516 100 aaPredicted RBP-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 MMP20O60882 483 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 PAPSS2O95340 614 aaPredicted RBP-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 STAU1O95793 577 aaKnown RBP-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 LATS1O95835 1130 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 FGAP02671 866 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 DBHP09172 617 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 HOXB7P09629 217 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 RARBP10826 455 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 PSG1P11464 419 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 EPB42P16452 691 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 GATA2P23769 480 aaPredicted RBP-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 MAOBP27338 520 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 IARSP41252 1262 aaKnown RBP-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 KIR2DS2P43631 304 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 SLC6A11P48066 632 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 LIG4P49917 911 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 ENTPD1P49961 510 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 ITGA1P56199 1179 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 SOX8P57073 446 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 BLOC1S1P78537 153 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 POU5F1Q01860 360 aaKnown RBP-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 DSC2Q02487 901 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 GSTM4Q03013 218 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 TTLL4Q14679 1199 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 TRIM71Q2Q1W2 868 aaKnown RBP-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 TMEM119Q4V9L6 283 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 TCTEX1D4Q5JR98 221 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 CEP78Q5JTW2 689 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 ZC2HC1BQ5TFG8 222 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 PIK3R6Q5UE93 754 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 NUTM2DQ5VT03 806 aaPredicted RBP-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 DCAF15Q66K64 600 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 CREB3L3Q68CJ9 461 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 GTF2IRD2BQ6EKJ0 949 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 NAPEPLDQ6IQ20 393 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 KIAA1211LQ6NV74 962 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 SHC4Q6S5L8 630 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 TFAP2EQ6VUC0 442 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 Q6ZR54 194 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 B4GALNT4Q76KP1 1039 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 MAMDC2Q7Z304 686 aaPredicted RBP-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 ZNF438Q7Z4V0 828 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 RBM23Q86U06 439 aaKnown RBP-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 GTF2IRD2Q86UP8 949 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 PIM3Q86V86 326 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 CNGA4Q8IV77 575 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 SFTPA2Q8IWL1 248 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 KLHDC8BQ8IXV7 354 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 ANKRD35Q8N283 1001 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 PGBD5Q8N414 524 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 ENGASEQ8NFI3 743 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 PIGOQ8TEQ8 1089 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 NEUROG1Q92886 237 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 L3MBTL2Q969R5 705 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 ISL2Q96A47 359 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 FBXO17Q96EF6 278 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 MYEOVQ96EZ4 313 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 HHIPL1Q96JK4 782 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 POP1Q99575 1024 aaKnown RBP-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 FAM110AQ9BQ89 295 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 CDK19Q9BWU1 502 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 PBX4Q9BYU1 374 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 FAM234AQ9H0X4 552 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 DUSP15Q9H1R2 295 aaPredicted RBP-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 SOX17Q9H6I2 414 aaPredicted RBP-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 C6orf106Q9H6K1 298 aaPredicted RBP-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 ZSWIM4Q9H7M6 989 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 ZFYVE1Q9HBF4 777 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 ETNK1Q9HBU6 452 aa-0.67□□□□□ -2.52
CDKL5-210ENST00000636046 CPNE5Q9HCH3 593 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms