RNA–Protein interactions for RNA: ENST00000635893.1

SCN1A-211, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 168 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-211ENST00000635893 ZBTB48P10074 688 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-211ENST00000635893 KRT4P19013 534 aa5.01□□□□□ -1.61
SCN1A-211ENST00000635893 ATP2B1P20020 1258 aa5.01□□□□□ -1.61
SCN1A-211ENST00000635893 ACAP1Q15027 740 aa5.01□□□□□ -1.61
SCN1A-211ENST00000635893 TMEM177Q53S58 311 aa5.01□□□□□ -1.61
SCN1A-211ENST00000635893 FAM111BQ6SJ93 734 aa5.01□□□□□ -1.61
SCN1A-211ENST00000635893 Q6ZPA2 131 aa5.01□□□□□ -1.61
SCN1A-211ENST00000635893 GAREM2Q75VX8 874 aa5.01□□□□□ -1.61
SCN1A-211ENST00000635893 RPL10LQ96L21 214 aaKnown RBP5.01□□□□□ -1.61
SCN1A-211ENST00000635893 GPHA2Q96T91 129 aa5.01□□□□□ -1.61
SCN1A-211ENST00000635893 BOCQ9BWV1 1114 aa5.01□□□□□ -1.61
SCN1A-211ENST00000635893 IGSF5Q9NSI5 407 aa5.01□□□□□ -1.61
SCN1A-211ENST00000635893 SFMBT1Q9UHJ3 866 aa5.01□□□□□ -1.61
SCN1A-211ENST00000635893 CCDC163A0A0D9SF12 145 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 TCRBV16S1A1N1A0A5B0 115 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 TMEM191CA6NGB0 347 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 GOLGA8BA8MQT2 603 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 TRAF5O00463 557 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 FOXN1O15353 648 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 KCNQ2O43526 872 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 KCNA6P17658 529 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 FNTBP49356 437 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 BPIFB4P59827 614 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 ADAM8P78325 824 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 ROM1Q03395 351 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 TCIRG1Q13488 830 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 TOB2Q14106 344 aaPredicted RBP5□□□□□ -1.61
SCN1A-211ENST00000635893 RASA3Q14644 834 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 ELAVL1Q15717 326 aaKnown RBP5□□□□□ -1.61
SCN1A-211ENST00000635893 DGKDQ16760 1214 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 GAGE13Q4V321 117 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 NAALADL2Q58DX5 795 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 OTOP1Q7RTM1 612 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 IGSF22Q8N9C0 903 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 ANKRD53Q8N9V6 530 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 OR5AN1Q8NGI8 311 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 CRAMP1Q96RY5 1269 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 TTPALQ9BTX7 342 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 GPRC5BQ9NZH0 403 aa5□□□□□ -1.61
SCN1A-211ENST00000635893 RBM8AQ9Y5S9 174 aaKnown RBP5□□□□□ -1.61
SCN1A-211ENST00000635893 PRLP01236 227 aa4.99□□□□□ -1.61
SCN1A-211ENST00000635893 SMAD3P84022 425 aaKnown RBP4.99□□□□□ -1.61
SCN1A-211ENST00000635893 SLC6A3Q01959 620 aa4.99□□□□□ -1.61
SCN1A-211ENST00000635893 SERINC3Q13530 473 aa4.99□□□□□ -1.61
SCN1A-211ENST00000635893 ARHGAP44Q17R89 818 aa4.99□□□□□ -1.61
SCN1A-211ENST00000635893 ABHD17CQ6PCB6 329 aa4.99□□□□□ -1.61
SCN1A-211ENST00000635893 BRAPQ7Z569 592 aa4.99□□□□□ -1.61
SCN1A-211ENST00000635893 NKD2Q969F2 451 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-211ENST00000635893 DEPDC7Q96QD5 511 aa4.99□□□□□ -1.61
SCN1A-211ENST00000635893 TCF25Q9BQ70 676 aa4.99□□□□□ -1.61
SCN1A-211ENST00000635893 HIRIP3Q9BW71 556 aaPredicted RBP4.99□□□□□ -1.61
SCN1A-211ENST00000635893 GPR87Q9BY21 358 aa4.99□□□□□ -1.61
SCN1A-211ENST00000635893 MRPL4Q9BYD3 311 aaKnown RBP4.99□□□□□ -1.61
SCN1A-211ENST00000635893 TANGO6Q9C0B7 1094 aa4.99□□□□□ -1.61
SCN1A-211ENST00000635893 MAGEL2Q9UJ55 1249 aa4.99□□□□□ -1.61
SCN1A-211ENST00000635893 XDHP47989 1333 aa4.98□□□□□ -1.61
SCN1A-211ENST00000635893 UBE2QL1A1L167 161 aa4.98□□□□□ -1.61
SCN1A-211ENST00000635893 FAM221BA6H8Z2 402 aa4.98□□□□□ -1.61
SCN1A-211ENST00000635893 PTGS2P35354 604 aa4.98□□□□□ -1.61
SCN1A-211ENST00000635893 RGS3P49796 1198 aa4.98□□□□□ -1.61
SCN1A-211ENST00000635893 ANTXR2P58335 489 aa4.98□□□□□ -1.61
SCN1A-211ENST00000635893 LAIR1Q6GTX8 287 aa4.98□□□□□ -1.61
SCN1A-211ENST00000635893 FGD2Q7Z6J4 655 aa4.98□□□□□ -1.61
SCN1A-211ENST00000635893 RPUSD2Q8IZ73 545 aaKnown RBP4.98□□□□□ -1.61
SCN1A-211ENST00000635893 JMYQ8N9B5 988 aa4.98□□□□□ -1.61
SCN1A-211ENST00000635893 ZSWIM2Q8NEG5 633 aa4.98□□□□□ -1.61
SCN1A-211ENST00000635893 HAS1Q92839 578 aa4.98□□□□□ -1.61
SCN1A-211ENST00000635893 MAML3Q96JK9 1138 aa4.98□□□□□ -1.61
SCN1A-211ENST00000635893 NRDE2Q9H7Z3 1164 aa4.98□□□□□ -1.61
SCN1A-211ENST00000635893 IL23AQ9NPF7 189 aa4.98□□□□□ -1.61
SCN1A-211ENST00000635893 KCMF1Q9P0J7 381 aa4.98□□□□□ -1.61
SCN1A-211ENST00000635893 RPS6KA4O75676 772 aa4.97□□□□□ -1.61
SCN1A-211ENST00000635893 VSIG10L2P0DP72 767 aa4.97□□□□□ -1.61
SCN1A-211ENST00000635893 RBM25P49756 843 aaKnown RBP4.97□□□□□ -1.61
SCN1A-211ENST00000635893 KIF11P52732 1056 aa4.97□□□□□ -1.61
SCN1A-211ENST00000635893 FKBP15Q5T1M5 1219 aa4.97□□□□□ -1.61
SCN1A-211ENST00000635893 SLFN12LQ6IEE8 588 aa4.97□□□□□ -1.61
SCN1A-211ENST00000635893 MFSD5Q6N075 450 aa4.97□□□□□ -1.61
SCN1A-211ENST00000635893 CLEC14AQ86T13 490 aa4.97□□□□□ -1.61
SCN1A-211ENST00000635893 PLA2G15Q8NCC3 412 aa4.97□□□□□ -1.61
SCN1A-211ENST00000635893 WDR92Q96MX6 357 aa4.97□□□□□ -1.61
SCN1A-211ENST00000635893 TRIM39Q9HCM9 518 aa4.97□□□□□ -1.61
SCN1A-211ENST00000635893 ACSS2Q9NR19 701 aa4.97□□□□□ -1.61
SCN1A-211ENST00000635893 SNTG2Q9NY99 539 aa4.97□□□□□ -1.61
SCN1A-211ENST00000635893 RCAN3Q9UKA8 241 aa4.97□□□□□ -1.61
SCN1A-211ENST00000635893 UBA6A0AVT1 1052 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-211ENST00000635893 KLRG2A4D1S0 409 aaPredicted RBP4.96□□□□□ -1.62
SCN1A-211ENST00000635893 GOLGA6L6A8MZA4 724 aa4.96□□□□□ -1.62
SCN1A-211ENST00000635893 KRT37O76014 449 aa4.96□□□□□ -1.62
SCN1A-211ENST00000635893 MECP2P51608 486 aaKnown RBP4.96□□□□□ -1.62
SCN1A-211ENST00000635893 RABGGTBP53611 331 aa4.96□□□□□ -1.62
SCN1A-211ENST00000635893 COL10A1Q03692 680 aa4.96□□□□□ -1.62
SCN1A-211ENST00000635893 RABL3Q5HYI8 236 aa4.96□□□□□ -1.62
SCN1A-211ENST00000635893 TTC38Q5R3I4 469 aa4.96□□□□□ -1.62
SCN1A-211ENST00000635893 KRT40Q6A162 431 aa4.96□□□□□ -1.62
SCN1A-211ENST00000635893 HTR3DQ70Z44 454 aa4.96□□□□□ -1.62
SCN1A-211ENST00000635893 BMP8AQ7Z5Y6 402 aa4.96□□□□□ -1.62
SCN1A-211ENST00000635893 MRGPREQ86SM8 312 aa4.96□□□□□ -1.62
SCN1A-211ENST00000635893 DDX53Q86TM3 631 aaKnown RBP4.96□□□□□ -1.62
SCN1A-211ENST00000635893 SLC25A43Q8WUT9 341 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms