RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 TMOD4Q9NZQ9 345 aa15.67■□□□□ 0.1
PTBP1-221ENST00000635647 AFF2P51816 1311 aa15.67■□□□□ 0.1
PTBP1-221ENST00000635647 DDX60Q8IY21 1712 aaKnown RBP15.67■□□□□ 0.1
PTBP1-221ENST00000635647 PJA2O43164 708 aa15.67■□□□□ 0.1
PTBP1-221ENST00000635647 USP11P51784 963 aa15.67■□□□□ 0.1
PTBP1-221ENST00000635647 PPP1R7Q15435 360 aa15.67■□□□□ 0.1
PTBP1-221ENST00000635647 TRIM51Q9BSJ1 452 aa15.67■□□□□ 0.1
PTBP1-221ENST00000635647 TAF1DQ9H5J8 278 aaPredicted RBP15.67■□□□□ 0.1
PTBP1-221ENST00000635647 METTL14Q9HCE5 456 aaKnown RBP15.67■□□□□ 0.1
PTBP1-221ENST00000635647 KCNK9Q9NPC2 374 aa15.67■□□□□ 0.1
PTBP1-221ENST00000635647 COL14A1Q05707 1796 aaKnown RBP15.67■□□□□ 0.1
PTBP1-221ENST00000635647 MIER3Q7Z3K6 550 aa15.66■□□□□ 0.1
PTBP1-221ENST00000635647 TCP11Q8WWU5 503 aa15.66■□□□□ 0.1
PTBP1-221ENST00000635647 UBE2TQ9NPD8 197 aaPredicted RBP15.66■□□□□ 0.1
PTBP1-221ENST00000635647 FBXL5Q9UKA1 691 aa15.66■□□□□ 0.1
PTBP1-221ENST00000635647 ABCB11O95342 1321 aa15.66■□□□□ 0.1
PTBP1-221ENST00000635647 EDIL3O43854 480 aa15.66■□□□□ 0.1
PTBP1-221ENST00000635647 TMOD1P28289 359 aa15.66■□□□□ 0.1
PTBP1-221ENST00000635647 ALDH1B1P30837 517 aa15.66■□□□□ 0.1
PTBP1-221ENST00000635647 GALCP54803 685 aa15.66■□□□□ 0.1
PTBP1-221ENST00000635647 PLCB3Q01970 1234 aa15.66■□□□□ 0.1
PTBP1-221ENST00000635647 DRAP1Q14919 205 aaPredicted RBP15.66■□□□□ 0.1
PTBP1-221ENST00000635647 CCDC105Q8IYK2 499 aa15.66■□□□□ 0.1
PTBP1-221ENST00000635647 MSL3Q8N5Y2 521 aaKnown RBP15.66■□□□□ 0.1
PTBP1-221ENST00000635647 BZW2Q9Y6E2 419 aaKnown RBP15.66■□□□□ 0.1
PTBP1-221ENST00000635647 MSH4O15457 936 aa15.66■□□□□ 0.1
PTBP1-221ENST00000635647 POLR2MP0CAP2 368 aa15.66■□□□□ 0.1
PTBP1-221ENST00000635647 PSMC2P35998 433 aaKnown RBP15.66■□□□□ 0.1
PTBP1-221ENST00000635647 ACER1Q8TDN7 264 aa15.66■□□□□ 0.1
PTBP1-221ENST00000635647 WHAMMQ8TF30 809 aa15.66■□□□□ 0.1
PTBP1-221ENST00000635647 KLC4Q9NSK0 619 aa15.66■□□□□ 0.1
PTBP1-221ENST00000635647 ZNF233A6NK53 670 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 EVI5O60447 810 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 VIMP08670 466 aaKnown RBP15.65■□□□□ 0.1
PTBP1-221ENST00000635647 DDR1Q08345 913 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 PPP4R3CPQ6ZMV5 832 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 SUGP1Q8IWZ8 645 aaKnown RBP15.65■□□□□ 0.1
PTBP1-221ENST00000635647 MLXIPLQ9NP71 852 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 TYW1Q9NV66 732 aaKnown RBP15.65■□□□□ 0.1
PTBP1-221ENST00000635647 CCPG1Q9ULG6 757 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 GAKO14976 1311 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 PSEN1P49768 467 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 ERVK-9P63128 1117 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 SNCBQ16143 134 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 ASTE1Q2TB18 679 aaPredicted RBP15.65■□□□□ 0.1
PTBP1-221ENST00000635647 ZCWPW2Q504Y3 356 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 ARFGAP2Q8N6H7 521 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 FAM163AQ96GL9 167 aaPredicted RBP15.65■□□□□ 0.1
PTBP1-221ENST00000635647 ZNF668Q96K58 619 aaPredicted RBP15.65■□□□□ 0.1
PTBP1-221ENST00000635647 GJD4Q96KN9 370 aaPredicted RBP15.65■□□□□ 0.1
PTBP1-221ENST00000635647 ADAM33Q9BZ11 813 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 KCTD10Q9H3F6 313 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 EML1O00423 815 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 CDC25CP30307 473 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 SLC12A3P55017 1021 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 XKR9Q5GH70 373 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 FRMD5Q7Z6J6 570 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 THOC1Q96FV9 657 aaKnown RBP15.65■□□□□ 0.1
PTBP1-221ENST00000635647 ATP6V1G3Q96LB4 118 aa15.65■□□□□ 0.1
PTBP1-221ENST00000635647 TMEM150BA6NC51 233 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 ATMINO43313 823 aaPredicted RBP15.64■□□□□ 0.09
PTBP1-221ENST00000635647 ECE2O60344 883 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 RPA1P27694 616 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 LSP1P33241 339 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 STAT2P52630 851 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 GABPAQ06546 454 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 EDRF1Q3B7T1 1238 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 C2CD6Q53TS8 623 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 SYCE1Q8N0S2 351 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 PBKQ96KB5 322 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 FAM84AQ96KN4 292 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 PARVGQ9HBI0 331 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 SNX24Q9Y343 169 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 A0A1B0GUL6 1792 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 ENO4A6NNW6 628 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 FERP16591 822 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 GRIPAP1Q4V328 841 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 PRAMEF18Q5VWM3 479 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 LMBRD2Q68DH5 695 aaPredicted RBP15.64■□□□□ 0.09
PTBP1-221ENST00000635647 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.64■□□□□ 0.093e-9■■□□□ 12.7
PTBP1-221ENST00000635647 APOBEC3HQ6NTF7 200 aaKnown RBP15.64■□□□□ 0.09
PTBP1-221ENST00000635647 SP8Q8IXZ3 490 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 SYT2Q8N9I0 419 aaPredicted RBP15.64■□□□□ 0.09
PTBP1-221ENST00000635647 SYN2Q92777 582 aaPredicted RBP15.64■□□□□ 0.09
PTBP1-221ENST00000635647 RSRC1Q96IZ7 334 aaKnown RBP15.64■□□□□ 0.09
PTBP1-221ENST00000635647 TRIM6Q9C030 488 aaPredicted RBP15.64■□□□□ 0.09
PTBP1-221ENST00000635647 GANQ9H2C0 597 aa15.64■□□□□ 0.09
PTBP1-221ENST00000635647 PDXKO00764 312 aa15.63■□□□□ 0.09
PTBP1-221ENST00000635647 MEIS2O14770 477 aa15.63■□□□□ 0.09
PTBP1-221ENST00000635647 LCA5LO95447 670 aa15.63■□□□□ 0.09
PTBP1-221ENST00000635647 HSD17B3P37058 310 aa15.63■□□□□ 0.09
PTBP1-221ENST00000635647 MYL7Q01449 175 aa15.63■□□□□ 0.09
PTBP1-221ENST00000635647 EPC2Q52LR7 807 aa15.63■□□□□ 0.09
PTBP1-221ENST00000635647 OTUD6AQ7L8S5 288 aa15.63■□□□□ 0.09
PTBP1-221ENST00000635647 ANKRD42Q8N9B4 389 aa15.63■□□□□ 0.09
PTBP1-221ENST00000635647 TPCN2Q8NHX9 752 aa15.63■□□□□ 0.09
PTBP1-221ENST00000635647 SLC35G2Q8TBE7 412 aa15.63■□□□□ 0.09
PTBP1-221ENST00000635647 RBM46Q8TBY0 533 aaKnown RBP15.63■□□□□ 0.09
PTBP1-221ENST00000635647 SAAL1Q96ER3 474 aa15.63■□□□□ 0.09
PTBP1-221ENST00000635647 AIPL1Q9NZN9 384 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms