RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	GATM	P50440	423 aa		11.71	□□□□□ -0.53
UBE3A-223	ENST00000631247	CCT2	P78371	535 aa	Known RBP	11.71	□□□□□ -0.53
UBE3A-223	ENST00000631247	COL19A1	Q14993	1142 aa		11.71	□□□□□ -0.53
UBE3A-223	ENST00000631247	PKN1	Q16512	942 aa		11.71	□□□□□ -0.53
UBE3A-223	ENST00000631247	CPLX2	Q6PUV4	134 aa	Known RBP	11.71	□□□□□ -0.53
UBE3A-223	ENST00000631247	ADGRD1	Q6QNK2	874 aa		11.71	□□□□□ -0.53
UBE3A-223	ENST00000631247	SLC24A5	Q71RS6	500 aa		11.71	□□□□□ -0.53
UBE3A-223	ENST00000631247	KIAA0319L	Q8IZA0	1049 aa		11.71	□□□□□ -0.53
UBE3A-223	ENST00000631247	KLHL23	Q8NBE8	558 aa		11.71	□□□□□ -0.53
UBE3A-223	ENST00000631247	POF1B	Q8WVV4	589 aa		11.71	□□□□□ -0.53
UBE3A-223	ENST00000631247	KCNB2	Q92953	911 aa		11.71	□□□□□ -0.53
UBE3A-223	ENST00000631247	ATP6V0A4	Q9HBG4	840 aa		11.71	□□□□□ -0.53
UBE3A-223	ENST00000631247	NCOA5	Q9HCD5	579 aa	Known RBP	11.71	□□□□□ -0.53
UBE3A-223	ENST00000631247	RGS18	Q9NS28	235 aa		11.71	□□□□□ -0.53
UBE3A-223	ENST00000631247	ST3GAL5	Q9UNP4	418 aa		11.71	□□□□□ -0.53
UBE3A-223	ENST00000631247	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.71	□□□□□ -0.53
UBE3A-223	ENST00000631247	PLXNA4	Q9HCM2	1894 aa		11.71	□□□□□ -0.53
UBE3A-223	ENST00000631247	WDR81	Q562E7	1941 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	TBKBP1	A7MCY6	615 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	ZBTB42	B2RXF5	422 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	ADAMTS3	O15072	1205 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	MAGEB2	O15479	319 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	MGEA5	O60502	916 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	GPR37L1	O60883	481 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	OAT	P04181	439 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	ITGB1	P05556	798 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	IFNAR1	P17181	557 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	ATP4A	P20648	1035 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	CLCN3	P51790	818 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	PRKCE	Q02156	737 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	ZP2	Q05996	745 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	SMAD4	Q13485	552 aa	Known RBP	11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	TMEM132A	Q24JP5	1023 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	CTC1	Q2NKJ3	1217 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	LRCH2	Q5VUJ6	765 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	ADHFE1	Q8IWW8	467 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	ABI1	Q8IZP0	508 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	FBXL16	Q8N461	479 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	MICAL1	Q8TDZ2	1067 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	TMEM40	Q8WWA1	233 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	TEKT3	Q9BXF9	490 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	C22orf23	Q9BZE7	217 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	UPF3B	Q9BZI7	483 aa	Known RBP	11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	CDHR5	Q9HBB8	845 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	DISC1	Q9NRI5	854 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	NRBP2	Q9NSY0	501 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	CD207	Q9UJ71	328 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	GTF3C3	Q9Y5Q9	886 aa		11.7	□□□□□ -0.54
UBE3A-223	ENST00000631247	TK2	O00142	265 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	LINC01565	O15544	149 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	HOXA2	O43364	376 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	MBTPS2	O43462	519 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	DCX	O43602	365 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	TBX10	O75333	385 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	ZSCAN20	P17040	1043 aa	Predicted RBP	11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	DNAJB1	P25685	340 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	PDIA3	P30101	505 aa	Known RBP	11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	SFN	P31947	248 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	CIITA	P33076	1130 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	GTF2F1	P35269	517 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	LTBR	P36941	435 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	NRIP1	P48552	1158 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	JAK3	P52333	1124 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	UBE3A	Q05086	875 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	SSRP1	Q08945	709 aa	Known RBP	11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	EFCAB12	Q6NXP0	572 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	RUFY3	Q7L099	469 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	RBM23	Q86U06	439 aa	Known RBP	11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	FAM228A	Q86W67	206 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	THNSL1	Q8IYQ7	743 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	CRIPAK	Q8N1N5	446 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	LRRC71	Q8N4P6	559 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	RNF169	Q8NCN4	708 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	SPPL3	Q8TCT6	385 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	AGXT2	Q9BYV1	514 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	SH3GLB2	Q9NR46	395 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	TMEM161A	Q9NX61	479 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	CYP46A1	Q9Y6A2	500 aa		11.69	□□□□□ -0.54
UBE3A-223	ENST00000631247	FSD2	A1L4K1	749 aa		11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	PRR33	A8MZF0	331 aa		11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247		C9IYK1	514 aa		11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	MSH4	O15457	936 aa		11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	DEXI	O95424	95 aa		11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	SRGAP2B	P0DMP2	458 aa		11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	FGFR1	P11362	822 aa		11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	LAG3	P18627	525 aa		11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	IRS1	P35568	1242 aa		11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	USP11	P51784	963 aa		11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	NLRP11	P59045	1033 aa	Known RBP	11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	DLX2	Q07687	328 aa	Predicted RBP	11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	TBC1D8B	Q0IIM8	1120 aa		11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	SMAD2	Q15796	467 aa	Known RBP	11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	NTRK3	Q16288	839 aa		11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	FAM102B	Q5T8I3	360 aa		11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	ADGRD2	Q7Z7M1	963 aa		11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	EFHB	Q8N7U6	833 aa		11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	TBCK	Q8TEA7	893 aa		11.68	□□□□□ -0.54
UBE3A-223	ENST00000631247	NLRP7	Q8WX94	980 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms