RNA–Protein interactions for RNA: ENST00000629380.2

SYNGAP1-208, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SYNGAP1, Length 9,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-208ENST00000629380 BLOC1S6Q9UL45 172 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 C4BPBP20851 252 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 ZNF555Q8NEP9 628 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 ANO5Q75V66 913 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 URGCPQ8TCY9 931 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 PCDHB8Q9UN66 801 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 ACSL3O95573 720 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 HABP4Q5JVS0 413 aaKnown RBP14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 SRPK1Q96SB4 655 aaKnown RBP14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 AFDNP55196 1824 aaKnown RBP14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 ERBB3P21860 1342 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 ZSCAN9O15535 394 aaPredicted RBP14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 EPM2AIP1Q7L775 607 aaPredicted RBP14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 SLC26A7Q8TE54 656 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 DEAF1O75398 565 aaPredicted RBP14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 SH3TC2Q8TF17 1288 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 STOML1Q9UBI4 398 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 ZNF229Q9UJW7 825 aa14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 FNDC3AQ9Y2H6 1198 aaKnown RBP14.06□□□□□ -0.16
SYNGAP1-208ENST00000629380 BTDP43251 543 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 JAK3P52333 1124 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 DYDC2Q96IM9 177 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 PPARGC1AQ9UBK2 798 aaKnown RBP14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 MMEP08473 750 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 MXI1P50539 228 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 IQCA1LA6NCM1 817 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 IMPDH2P12268 514 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 CHRNDQ07001 517 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 UBE2TQ9NPD8 197 aaPredicted RBP14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 GADD45BO75293 160 aaPredicted RBP14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 WDR47O94967 919 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 ZRANB2O95218 330 aaKnown RBP eCLIP14.05□□□□□ -0.163e-6■■■■■ 27.8
SYNGAP1-208ENST00000629380 CASP14P31944 242 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 MRPS15P82914 257 aaKnown RBP14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 LMBRD1Q9NUN5 540 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 SORBS3O60504 671 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 DMTNQ08495 405 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 TOGARAM2Q6ZUX3 1019 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 LRRC47Q8N1G4 583 aaKnown RBP14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 TTC13Q8NBP0 860 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 CERKQ8TCT0 537 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 NEMP1O14524 444 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 IL10P22301 178 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 AP1B1Q10567 949 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 FAM47AQ5JRC9 791 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 CIAPIN1Q6FI81 312 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 TSPY1Q01534 308 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 NAA35Q5VZE5 725 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 FAF2Q96CS3 445 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 GNAT1P11488 350 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 P2RX5Q93086 422 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 FANCLQ9NW38 375 aa14.05□□□□□ -0.16
SYNGAP1-208ENST00000629380 CDK12Q9NYV4 1490 aaPredicted RBP14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 SPATA31A3Q5VYP0 1347 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 IKBKBO14920 756 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 NNMTP40261 264 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 LBRQ14739 615 aaKnown RBP14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 ASAP2O43150 1006 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 HADHAP40939 763 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 TNFAIP2Q03169 654 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 INPP5AQ14642 412 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 KRT72Q14CN4 511 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 BRINP3Q76B58 766 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 SCFD1Q8WVM8 642 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 SMYD3Q9H7B4 428 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 SLC4A7Q9Y6M7 1214 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 DAB1O75553 588 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 RPSAP08865 295 aaKnown RBP14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 GTSE1Q9NYZ3 720 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 A0A0G2JND7 137 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 C5orf58C9J3I9 102 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 ORC4O43929 436 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 CNGA3Q16281 694 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 ME3Q16798 604 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 NUDT18Q6ZVK8 323 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 ALKBH8Q96BT7 664 aaKnown RBP14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 FAM167AQ96KS9 214 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 HOXD10P28358 340 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 ZNF658Q5TYW1 1059 aaPredicted RBP14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 RNF26Q9BY78 433 aaPredicted RBP14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 DMC1Q14565 340 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 CCDC85BQ15834 202 aaPredicted RBP14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 TADA1Q96BN2 335 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 PPP1R2P1Q96PQ5 205 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 TNKSO95271 1327 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 STXBP2Q15833 593 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 SLFN13Q68D06 897 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 MFN1Q8IWA4 741 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 KIAA2013Q8IYS2 634 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 SPATA17Q96L03 361 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 ABCF3Q9NUQ8 709 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 SESN1Q9Y6P5 492 aa14.04□□□□□ -0.16
SYNGAP1-208ENST00000629380 USP17L3A6NCW0 530 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 USP17L4A6NCW7 530 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 TBC1D4O60343 1298 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 LAMB3Q13751 1172 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 USP17L1Q7RTZ2 530 aa14.03□□□□□ -0.16
SYNGAP1-208ENST00000629380 RWDD2BP57060 319 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms