RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 RFC5P40937 340 aa23.06■■□□□ 1.28
CIRBP-246ENST00000628979 RILPL1Q5EBL4 403 aa23.06■■□□□ 1.28
CIRBP-246ENST00000628979 CATSPER3Q86XQ3 398 aa23.06■■□□□ 1.28
CIRBP-246ENST00000628979 MAFAQ8NHW3 353 aaPredicted RBP23.06■■□□□ 1.28
CIRBP-246ENST00000628979 NLRP4Q96MN2 994 aa23.06■■□□□ 1.28
CIRBP-246ENST00000628979 FDXACB1Q9BRP7 624 aaPredicted RBP23.06■■□□□ 1.28
CIRBP-246ENST00000628979 GCOM2Q9BZD3 368 aaPredicted RBP23.06■■□□□ 1.28
CIRBP-246ENST00000628979 DHX33Q9H6R0 707 aaKnown RBP23.06■■□□□ 1.28
CIRBP-246ENST00000628979 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.06■■□□□ 1.28
CIRBP-246ENST00000628979 ANKEF1Q9NU02 776 aa23.06■■□□□ 1.28
CIRBP-246ENST00000628979 LRFN2Q9ULH4 789 aa23.06■■□□□ 1.28
CIRBP-246ENST00000628979 PPME1Q9Y570 386 aa23.06■■□□□ 1.28
CIRBP-246ENST00000628979 ARID2Q68CP9 1835 aa23.05■■□□□ 1.28
CIRBP-246ENST00000628979 EPOPA6NHQ4 379 aa23.05■■□□□ 1.28
CIRBP-246ENST00000628979 LYPLA2O95372 231 aa23.05■■□□□ 1.28
CIRBP-246ENST00000628979 SPATA31C1P0DKV0 1188 aa23.05■■□□□ 1.28
CIRBP-246ENST00000628979 DARSP14868 501 aaKnown RBP23.05■■□□□ 1.28
CIRBP-246ENST00000628979 CDC42EP1Q00587 391 aa23.05■■□□□ 1.28
CIRBP-246ENST00000628979 ADGRE1Q14246 886 aa23.05■■□□□ 1.28
CIRBP-246ENST00000628979 EMC2Q15006 297 aa23.05■■□□□ 1.28
CIRBP-246ENST00000628979 PPM1EQ8WY54 764 aa23.05■■□□□ 1.28
CIRBP-246ENST00000628979 TGS1Q96RS0 853 aaKnown RBP23.05■■□□□ 1.28
CIRBP-246ENST00000628979 MTRQ99707 1265 aa23.05■■□□□ 1.28
CIRBP-246ENST00000628979 TUFT1Q9NNX1 390 aa23.05■■□□□ 1.28
CIRBP-246ENST00000628979 LRWD1Q9UFC0 647 aa23.05■■□□□ 1.28
CIRBP-246ENST00000628979 CHD9Q3L8U1 2897 aa23.04■■□□□ 1.28
CIRBP-246ENST00000628979 SRGAP2CP0DJJ0 459 aa23.04■■□□□ 1.28
CIRBP-246ENST00000628979 FXR2P51116 673 aaKnown RBP eCLIP23.04■■□□□ 1.28
CIRBP-246ENST00000628979 FERMT3Q86UX7 667 aa23.04■■□□□ 1.28
CIRBP-246ENST00000628979 PRPF31Q8WWY3 499 aaKnown RBP23.04■■□□□ 1.28
CIRBP-246ENST00000628979 POLR3CQ9BUI4 534 aaPredicted RBP23.04■■□□□ 1.28
CIRBP-246ENST00000628979 COL4A3BPQ9Y5P4 624 aa23.04■■□□□ 1.28
CIRBP-246ENST00000628979 TTC3P53804 2025 aa23.04■■□□□ 1.28
CIRBP-246ENST00000628979 STAG3L1P0CL83 205 aa23.03■■□□□ 1.28
CIRBP-246ENST00000628979 ZSCAN20P17040 1043 aaPredicted RBP23.03■■□□□ 1.28
CIRBP-246ENST00000628979 PDCP20941 246 aa23.03■■□□□ 1.28
CIRBP-246ENST00000628979 CCT6AP40227 531 aaKnown RBP23.03■■□□□ 1.28
CIRBP-246ENST00000628979 POTEGQ6S5H5 508 aa23.03■■□□□ 1.28
CIRBP-246ENST00000628979 DTHD1Q6ZMT9 781 aa23.03■■□□□ 1.28
CIRBP-246ENST00000628979 NPAS4Q8IUM7 802 aa23.03■■□□□ 1.28
CIRBP-246ENST00000628979 MICALL1Q8N3F8 863 aa23.03■■□□□ 1.28
CIRBP-246ENST00000628979 SP7Q8TDD2 431 aaPredicted RBP23.03■■□□□ 1.28
CIRBP-246ENST00000628979 TCP11Q8WWU5 503 aa23.03■■□□□ 1.28
CIRBP-246ENST00000628979 PSPC1Q8WXF1 523 aaKnown RBP23.03■■□□□ 1.28
CIRBP-246ENST00000628979 C17orf80Q9BSJ5 609 aa23.03■■□□□ 1.28
CIRBP-246ENST00000628979 RGS18Q9NS28 235 aa23.03■■□□□ 1.28
CIRBP-246ENST00000628979 PCDHB7Q9Y5E2 793 aa23.03■■□□□ 1.28
CIRBP-246ENST00000628979 CDH23Q9H251 3354 aa23.03■■□□□ 1.28
CIRBP-246ENST00000628979 LAD1O00515 517 aa23.02■■□□□ 1.28
CIRBP-246ENST00000628979 RPA1P27694 616 aa23.02■■□□□ 1.28
CIRBP-246ENST00000628979 SARSP49591 514 aaKnown RBP23.02■■□□□ 1.28
CIRBP-246ENST00000628979 RARRES1P49788 294 aa23.02■■□□□ 1.28
CIRBP-246ENST00000628979 ERVK-21P61565 698 aa23.02■■□□□ 1.28
CIRBP-246ENST00000628979 CCDC85BQ15834 202 aaPredicted RBP23.02■■□□□ 1.28
CIRBP-246ENST00000628979 IL17AQ16552 155 aa23.02■■□□□ 1.28
CIRBP-246ENST00000628979 HAUS3Q68CZ6 603 aa23.02■■□□□ 1.28
CIRBP-246ENST00000628979 ZNF410Q86VK4 478 aa23.02■■□□□ 1.28
CIRBP-246ENST00000628979 HSCBQ8IWL3 235 aa23.02■■□□□ 1.28
CIRBP-246ENST00000628979 FIBCD1Q8N539 461 aa23.02■■□□□ 1.28
CIRBP-246ENST00000628979 INTS4Q96HW7 963 aaKnown RBP23.02■■□□□ 1.28
CIRBP-246ENST00000628979 NACC1Q96RE7 527 aa23.02■■□□□ 1.28
CIRBP-246ENST00000628979 RAB34Q9BZG1 259 aa23.02■■□□□ 1.28
CIRBP-246ENST00000628979 ATP6V0A4Q9HBG4 840 aa23.02■■□□□ 1.28
CIRBP-246ENST00000628979 C1orf112Q9NSG2 853 aa23.02■■□□□ 1.28
CIRBP-246ENST00000628979 GAS2O43903 313 aaKnown RBP23.01■■□□□ 1.27
CIRBP-246ENST00000628979 USO1O60763 962 aaKnown RBP23.01■■□□□ 1.27
CIRBP-246ENST00000628979 XRCC6P12956 609 aaKnown RBP eCLIP23.01■■□□□ 1.27
CIRBP-246ENST00000628979 LAMTOR4Q0VGL1 99 aa23.01■■□□□ 1.27
CIRBP-246ENST00000628979 BTG3Q14201 252 aaPredicted RBP23.01■■□□□ 1.27
CIRBP-246ENST00000628979 PDIA5Q14554 519 aa23.01■■□□□ 1.27
CIRBP-246ENST00000628979 PAN2Q504Q3 1202 aaKnown RBP23.01■■□□□ 1.27
CIRBP-246ENST00000628979 SLC24A5Q71RS6 500 aa23.01■■□□□ 1.27
CIRBP-246ENST00000628979 MAEAQ7L5Y9 396 aa23.01■■□□□ 1.27
CIRBP-246ENST00000628979 GDPD5Q8WTR4 605 aa23.01■■□□□ 1.27
CIRBP-246ENST00000628979 SNX21Q969T3 373 aa23.01■■□□□ 1.27
CIRBP-246ENST00000628979 INO80BQ9C086 356 aaPredicted RBP23.01■■□□□ 1.27
CIRBP-246ENST00000628979 XPNPEP1Q9NQW7 623 aa23.01■■□□□ 1.27
CIRBP-246ENST00000628979 PP2D1A8MPX8 630 aa23■■□□□ 1.27
CIRBP-246ENST00000628979 DGAT1O75907 488 aa23■■□□□ 1.27
CIRBP-246ENST00000628979 DGKIO75912 1065 aa23■■□□□ 1.27
CIRBP-246ENST00000628979 SYT1P21579 422 aa23■■□□□ 1.27
CIRBP-246ENST00000628979 PRPHP41219 470 aa23■■□□□ 1.27
CIRBP-246ENST00000628979 GATMP50440 423 aa23■■□□□ 1.27
CIRBP-246ENST00000628979 DSC3Q14574 896 aa23■■□□□ 1.27
CIRBP-246ENST00000628979 BRAPQ7Z569 592 aa23■■□□□ 1.27
CIRBP-246ENST00000628979 FBXO22Q8NEZ5 403 aa23■■□□□ 1.27
CIRBP-246ENST00000628979 SNX29Q8TEQ0 813 aa23■■□□□ 1.27
CIRBP-246ENST00000628979 ADGRA3Q8IWK6 1321 aa23■■□□□ 1.27
CIRBP-246ENST00000628979 C9IYK1 514 aa22.99■■□□□ 1.27
CIRBP-246ENST00000628979 ASAP2O43150 1006 aa22.99■■□□□ 1.27
CIRBP-246ENST00000628979 GTPBP6O43824 516 aaPredicted RBP22.99■■□□□ 1.27
CIRBP-246ENST00000628979 SFPQP23246 707 aaKnown RBP eCLIP22.99■■□□□ 1.27
CIRBP-246ENST00000628979 CDC25AP30304 524 aa22.99■■□□□ 1.27
CIRBP-246ENST00000628979 ATP2C1P98194 919 aaPredicted RBP22.99■■□□□ 1.27
CIRBP-246ENST00000628979 GRB10Q13322 594 aa22.99■■□□□ 1.27
CIRBP-246ENST00000628979 ECM1Q16610 540 aa22.99■■□□□ 1.27
CIRBP-246ENST00000628979 CATSPER4Q7RTX7 472 aa22.99■■□□□ 1.27
CIRBP-246ENST00000628979 IGSF22Q8N9C0 903 aa22.99■■□□□ 1.27
CIRBP-246ENST00000628979 RNF149Q8NC42 400 aa22.99■■□□□ 1.27
CIRBP-246ENST00000628979 ZNF689Q96CS4 500 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms