RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 MDM1Q8TC05 714 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 ZC3H10Q96K80 434 aaKnown RBP7.1□□□□□ -1.27
LINC00649-220ENST00000628906 SPATA33Q96N06 139 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 ZBP1Q9H171 429 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 TMX1Q9H3N1 280 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 PRORYQ9H606 182 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 MTMR4Q9NYA4 1195 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 SUPT16HQ9Y5B9 1047 aaKnown RBP7.1□□□□□ -1.27
LINC00649-220ENST00000628906 CDY2AQ9Y6F7 541 aa7.1□□□□□ -1.27
LINC00649-220ENST00000628906 LNP1A1A4G5 178 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 PYCARD-AS1I3L0S3 204 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 TTLL1O95922 423 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 GP1BBP13224 206 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 PBX3P40426 434 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 SLC1A4P43007 532 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 POLGP54098 1239 aaPredicted RBP7.09□□□□□ -1.27
LINC00649-220ENST00000628906 RARSP54136 660 aaKnown RBP7.09□□□□□ -1.27
LINC00649-220ENST00000628906 SIM1P81133 766 aaPredicted RBP7.09□□□□□ -1.27
LINC00649-220ENST00000628906 FAM189BP81408 668 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 IKQ13123 557 aaPredicted RBP7.09□□□□□ -1.27
LINC00649-220ENST00000628906 GAS6Q14393 721 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 CELF3Q5SZQ8 465 aaKnown RBP7.09□□□□□ -1.27
LINC00649-220ENST00000628906 RCSD1Q6JBY9 416 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 PCSK4Q6UW60 755 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 WDR5BQ86VZ2 330 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 VPS52Q8N1B4 723 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 SPEM1Q8N4L4 309 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 RGS22Q8NE09 1264 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 ST13P5Q8NFI4 369 aaPredicted RBP7.09□□□□□ -1.27
LINC00649-220ENST00000628906 LMBR1Q8WVP7 490 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 AUTS2Q8WXX7 1259 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 IWS1Q96ST2 819 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 DBNDD2Q9BQY9 259 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 TMEM117Q9H0C3 514 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 RANBP17Q9H2T7 1088 aaKnown RBP7.09□□□□□ -1.27
LINC00649-220ENST00000628906 SLC32A1Q9H598 525 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 ANTXR1Q9H6X2 564 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 TMEM9BQ9NQ34 198 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 RGS18Q9NS28 235 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 HDAC5Q9UQL6 1122 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 KIAA1217Q5T5P2 1943 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 MYH15Q9Y2K3 1946 aa7.09□□□□□ -1.27
LINC00649-220ENST00000628906 PLXNB3Q9ULL4 1909 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 B8ZZF3 427 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 C9IYK1 514 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 PRKAB2O43741 272 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 EIF3JO75822 258 aaKnown RBP7.08□□□□□ -1.28
LINC00649-220ENST00000628906 LGALS2P05162 132 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 CA8P35219 290 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 ARHGAP4P98171 946 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 ZNF423Q2M1K9 1284 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 PDXDC2PQ6P474 469 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 SLC24A5Q71RS6 500 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 PIP4P1Q86T03 277 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 KBTBD6Q86V97 674 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 LCORLQ8N3X6 602 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 EFCAB3Q8N7B9 438 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 FAM181AQ8N9Y4 354 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 GAB3Q8WWW8 586 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 CEP95Q96GE4 821 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 CASD1Q96PB1 797 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 MAF1Q9H063 256 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 ELAC1Q9H777 363 aaKnown RBP7.08□□□□□ -1.28
LINC00649-220ENST00000628906 LMAN1LQ9HAT1 526 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 MRVI1Q9Y6F6 885 aa7.08□□□□□ -1.28
LINC00649-220ENST00000628906 UTP20O75691 2785 aaKnown RBP7.08□□□□□ -1.28
LINC00649-220ENST00000628906 LRBAP50851 2863 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 IGSF9BQ9UPX0 1349 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 LAMA4Q16363 1823 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 SPAARA0A1B0GVQ0 90 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 UPK3BL1B0FP48 263 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 UPK3BL2E5RIL1 263 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 MAN2B1O00754 1011 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 C2CD2LO14523 706 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 MGEA5O60502 916 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 RPLP2P05387 115 aaKnown RBP7.07□□□□□ -1.28
LINC00649-220ENST00000628906 FGFR1P11362 822 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 MCCP23508 829 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 KLRC2P26717 231 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 ABCG1P45844 678 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 ALDH7A1P49419 539 aaKnown RBP7.07□□□□□ -1.28
LINC00649-220ENST00000628906 MRPS6P82932 125 aaKnown RBP7.07□□□□□ -1.28
LINC00649-220ENST00000628906 MTX1Q13505 466 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 KRTAP21-3Q3LHN1 58 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 HEATR6Q6AI08 1181 aaKnown RBP7.07□□□□□ -1.28
LINC00649-220ENST00000628906 CTR9Q6PD62 1173 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 KCNV1Q6PIU1 500 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 KCTD1Q719H9 257 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 AMOTL1Q8IY63 956 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 HS6ST3Q8IZP7 471 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 NSUN6Q8TEA1 469 aaKnown RBP7.07□□□□□ -1.28
LINC00649-220ENST00000628906 WHAMMQ8TF30 809 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 DNAJB3Q8WWF6 145 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 SMG7Q92540 1137 aaKnown RBP7.07□□□□□ -1.28
LINC00649-220ENST00000628906 ZNF707Q96C28 371 aaPredicted RBP7.07□□□□□ -1.28
LINC00649-220ENST00000628906 ADAMTS10Q9H324 1103 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 ATP6V0A4Q9HBG4 840 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 HEBP1Q9NRV9 189 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 C1orf112Q9NSG2 853 aa7.07□□□□□ -1.28
LINC00649-220ENST00000628906 TMEM161AQ9NX61 479 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms