RNA–Protein interactions for RNA: ENST00000628857.1

CNOT1-223, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5 BASIC

Gene CNOT1, Length 291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-223ENST00000628857 RAC3P60763 192 aa4.3□□□□□ -1.72
CNOT1-223ENST00000628857 MYBPC3Q14896 1274 aa4.3□□□□□ -1.72
CNOT1-223ENST00000628857 PCOLCEQ15113 449 aa4.3□□□□□ -1.72
CNOT1-223ENST00000628857 SKOR2Q2VWA4 1001 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-223ENST00000628857 SPATS1Q496A3 300 aa4.3□□□□□ -1.72
CNOT1-223ENST00000628857 AGBL4Q5VU57 503 aa4.3□□□□□ -1.72
CNOT1-223ENST00000628857 LARP4Q71RC2 724 aaKnown RBP eCLIP4.3□□□□□ -1.72
CNOT1-223ENST00000628857 CIR1Q86X95 450 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-223ENST00000628857 PPP1R14CQ8TAE6 165 aa4.3□□□□□ -1.72
CNOT1-223ENST00000628857 ERCC4Q92889 916 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-223ENST00000628857 NKD2Q969F2 451 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-223ENST00000628857 ZNF496Q96IT1 587 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-223ENST00000628857 GPR101Q96P66 508 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-223ENST00000628857 C1QTNF3Q9BXJ4 246 aa4.3□□□□□ -1.72
CNOT1-223ENST00000628857 NELFAQ9H3P2 528 aa4.3□□□□□ -1.72
CNOT1-223ENST00000628857 H2AFY2Q9P0M6 372 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-223ENST00000628857 CTDP1Q9Y5B0 961 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-223ENST00000628857 NUMBLQ9Y6R0 609 aa4.3□□□□□ -1.72
CNOT1-223ENST00000628857 NCANO14594 1321 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 PATE3B3GLJ2 98 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 B8ZZF3 427 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 K7ESM1 405 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 PRRG2O14669 202 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 RPS19P39019 145 aaKnown RBP4.29□□□□□ -1.72
CNOT1-223ENST00000628857 ADCY8P40145 1251 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 MRE11P49959 708 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 HGFACQ04756 655 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 NOLC1Q14978 699 aaKnown RBP eCLIP4.29□□□□□ -1.727e-6■■■□□ 16.5
CNOT1-223ENST00000628857 GAGE13Q4V321 117 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 ATP13A4Q4VNC1 1196 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 PRAMEF9Q5VWM5 478 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 RTKN2Q8IZC4 609 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 OR5AN1Q8NGI8 311 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 RTF1Q92541 710 aaKnown RBP4.29□□□□□ -1.72
CNOT1-223ENST00000628857 SLC5A5Q92911 643 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 NEIL1Q96FI4 390 aaPredicted RBP4.29□□□□□ -1.72
CNOT1-223ENST00000628857 LMF1Q96S06 567 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 BDH2Q9BUT1 245 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 MEGF9Q9H1U4 602 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 SPC25Q9HBM1 224 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 PUF60Q9UHX1 559 aaKnown RBP4.29□□□□□ -1.72
CNOT1-223ENST00000628857 CDC42EP3Q9UKI2 254 aa4.29□□□□□ -1.72
CNOT1-223ENST00000628857 MYPNQ86TC9 1320 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 NEMP1O14524 444 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 GPR42O15529 346 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 MTSS1O43312 755 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 OPHN1O60890 802 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 RAB11FIP3O75154 756 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 CR2P20023 1033 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 MAGEA10P43363 369 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-223ENST00000628857 ANTXR2P58335 489 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 DDB1Q16531 1140 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 RNF151Q2KHN1 245 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 RNF187Q5TA31 235 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-223ENST00000628857 BROXQ5VW32 411 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 RNF219Q5W0B1 726 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-223ENST00000628857 CFHR4Q92496 578 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 RABGGTAQ92696 567 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 PAWRQ96IZ0 340 aaKnown RBP4.28□□□□□ -1.72
CNOT1-223ENST00000628857 HIST1H2AHQ96KK5 128 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 WDR92Q96MX6 357 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 ACAP3Q96P50 834 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 HIST1H2AJQ99878 128 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 MYL10Q9BUA6 226 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 SLC6A15Q9H2J7 730 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 POLR3BQ9NW08 1133 aaPredicted RBP4.28□□□□□ -1.72
CNOT1-223ENST00000628857 MSRAQ9UJ68 235 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 NR2E1Q9Y466 385 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 SLC30A1Q9Y6M5 507 aa4.28□□□□□ -1.72
CNOT1-223ENST00000628857 SBNO2Q9Y2G9 1366 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 C1QTNF3-AMACRE9PGA6 284 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 K7ESF4 209 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 ELL2O00472 640 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-223ENST00000628857 DAPK3O43293 454 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 NRP2O60462 931 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 FSBPO95073 299 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 PFKMP08237 780 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 ADCY7P51828 1080 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 DUSP8Q13202 625 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 CT47A1Q5JQC4 288 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-223ENST00000628857 GPR155Q7Z3F1 870 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 FILIP1Q7Z7B0 1213 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 CDYL2Q8N8U2 506 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 SLC7A6OSQ96CW6 309 aaPredicted RBP4.27□□□□□ -1.73
CNOT1-223ENST00000628857 DYDC2Q96IM9 177 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 POFUT1Q9H488 388 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 MTG2Q9H4K7 406 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 OAZ3Q9UMX2 235 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 PTPN22Q9Y2R2 807 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 NOC2LQ9Y3T9 749 aaKnown RBP4.27□□□□□ -1.73
CNOT1-223ENST00000628857 TESMINQ9Y4I5 508 aa4.27□□□□□ -1.73
CNOT1-223ENST00000628857 ST20-MTHFSA0A0A6YYL1 179 aa4.26□□□□□ -1.73
CNOT1-223ENST00000628857 MATN2O00339 956 aa4.26□□□□□ -1.73
CNOT1-223ENST00000628857 SLC26A4O43511 780 aa4.26□□□□□ -1.73
CNOT1-223ENST00000628857 DNAJC6O75061 913 aa4.26□□□□□ -1.73
CNOT1-223ENST00000628857 RAD17O75943 681 aa4.26□□□□□ -1.73
CNOT1-223ENST00000628857 SEC24DO94855 1032 aaPredicted RBP4.26□□□□□ -1.73
CNOT1-223ENST00000628857 STAT5BP51692 787 aa4.26□□□□□ -1.73
CNOT1-223ENST00000628857 MANFP55145 182 aaKnown RBP4.26□□□□□ -1.73
CNOT1-223ENST00000628857 NFKB2Q00653 900 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms