RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 NIPAL1Q6NVV3 410 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 RWDD4Q6NW29 188 aaKnown RBP2.06□□□□□ -2.08
TCF4-264ENST00000628391 TUBA3EQ6PEY2 450 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 TTC23LQ6PF05 361 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 KLHL35Q6PF15 583 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 BORAQ6PGQ7 559 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 BLOC1S2Q6QNY1 142 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 SLC4A10Q6U841 1118 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 LRRC74BQ6ZQY2 392 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 CAPN12Q6ZSI9 719 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 ARHGEF18Q6ZSZ5 1173 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 ARHGAP27Q6ZUM4 889 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 TMTC3Q6ZXV5 915 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 INTS8Q75QN2 995 aaKnown RBP2.06□□□□□ -2.08
TCF4-264ENST00000628391 MAEAQ7L5Y9 396 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 DHX32Q7L7V1 743 aaKnown RBP2.06□□□□□ -2.08
TCF4-264ENST00000628391 HS2ST1Q7LGA3 356 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 CYP2U1Q7Z449 544 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 PIGWQ7Z7B1 504 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 SFR1Q86XK3 245 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 PALB2Q86YC2 1186 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 CCNJLQ8IV13 435 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 NELFCDQ8IXH7 590 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 FAM20CQ8IXL6 584 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 C16orf71Q8IYS4 520 aaPredicted RBP2.06□□□□□ -2.08
TCF4-264ENST00000628391 SPARTQ8N0X7 666 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 CYP4X1Q8N118 509 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 LILRB2Q8N423 598 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 RIBC1Q8N443 379 aaPredicted RBP2.06□□□□□ -2.08
TCF4-264ENST00000628391 KIF2BQ8N4N8 673 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 TRIML2Q8N7C3 387 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 PAF1Q8N7H5 531 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 TSPYL6Q8N831 410 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 LSMEM1Q8N8F7 131 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 ENAHQ8N8S7 591 aaPredicted RBP2.06□□□□□ -2.08
TCF4-264ENST00000628391 FAM13CQ8NE31 585 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 DDHD1Q8NEL9 900 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 OR7G1Q8NGA0 311 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 CEP70Q8NHQ1 597 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 NKX2-3Q8TAU0 364 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 GSDMBQ8TAX9 411 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 SLC16A10Q8TF71 515 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 PYROXD1Q8WU10 500 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 NELFBQ8WX92 580 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 ATL1Q8WXF7 558 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 PEX13Q92968 403 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 FBXW7Q969H0 707 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 RILPL2Q969X0 211 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 CCDC127Q96BQ5 260 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 TLCD1Q96CP7 247 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 RMDN1Q96DB5 314 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 SGF29Q96ES7 293 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 OTUD5Q96G74 571 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 COG3Q96JB2 828 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 MAELQ96JY0 434 aaKnown RBP2.06□□□□□ -2.08
TCF4-264ENST00000628391 COX4I2Q96KJ9 171 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 ZFRQ96KR1 1074 aaKnown RBP2.06□□□□□ -2.08
TCF4-264ENST00000628391 CAPZA3Q96KX2 299 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 CEP295NLQ96MC4 621 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 CEP63Q96MT8 703 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 BIRC8Q96P09 236 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 ZNF317Q96PQ6 595 aaPredicted RBP2.06□□□□□ -2.08
TCF4-264ENST00000628391 PPP1R10Q96QC0 940 aaKnown RBP2.06□□□□□ -2.08
TCF4-264ENST00000628391 PSKH2Q96QS6 385 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 NUDCD1Q96RS6 583 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 ZNF184Q99676 751 aaPredicted RBP2.06□□□□□ -2.08
TCF4-264ENST00000628391 OLFM1Q99784 485 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 CTRCQ99895 268 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 LLPHQ9BRT6 129 aaKnown RBP2.06□□□□□ -2.08
TCF4-264ENST00000628391 HAUS8Q9BT25 410 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 LRRC1Q9BTT6 524 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 TRIM55Q9BYV6 548 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 SHCBP1LQ9BZQ2 653 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 IMPG2Q9BZV3 1241 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 B3GNT4Q9C0J1 378 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 STMN4Q9H169 189 aaPredicted RBP2.06□□□□□ -2.08
TCF4-264ENST00000628391 ASCC2Q9H1I8 757 aaPredicted RBP2.06□□□□□ -2.08
TCF4-264ENST00000628391 IL25Q9H293 177 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 DPH5Q9H2P9 285 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 THAP9Q9H5L6 903 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 CAAP1Q9H8G2 361 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 CNNM2Q9H8M5 875 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 USP29Q9HBJ7 922 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 PLGRKTQ9HBL7 147 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 SLC38A10Q9HBR0 1119 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 GPBP1L1Q9HC44 474 aaPredicted RBP2.06□□□□□ -2.08
TCF4-264ENST00000628391 PALMDQ9NP74 551 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 VTA1Q9NP79 307 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 GPR108Q9NPR9 543 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 DISC1Q9NRI5 854 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 METTL5Q9NRN9 209 aaKnown RBP2.06□□□□□ -2.08
TCF4-264ENST00000628391 ABHD10Q9NUJ1 306 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 ABCF3Q9NUQ8 709 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 TBC1D23Q9NUY8 699 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 ARMC1Q9NVT9 282 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 POLR3EQ9NVU0 708 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 PAG1Q9NWQ8 432 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 PLK2Q9NYY3 685 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 HMG20BQ9P0W2 317 aa2.06□□□□□ -2.08
TCF4-264ENST00000628391 NKX1-2Q9UD57 310 aaPredicted RBP2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms