RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 FAM8A1Q9UBU6 413 aa13.71□□□□□ -0.21
SCN8A-209ENST00000627620 RRP15Q9Y3B9 282 aaKnown RBP13.71□□□□□ -0.21
SCN8A-209ENST00000627620 VPS39Q96JC1 886 aa13.71□□□□□ -0.21
SCN8A-209ENST00000627620 SNX24Q9Y343 169 aa13.71□□□□□ -0.21
SCN8A-209ENST00000627620 SYNGAP1Q96PV0 1343 aa13.71□□□□□ -0.21
SCN8A-209ENST00000627620 GPC3P51654 580 aa13.71□□□□□ -0.21
SCN8A-209ENST00000627620 GFPT1Q06210 699 aaPredicted RBP13.71□□□□□ -0.21
SCN8A-209ENST00000627620 KNOP1Q1ED39 458 aaKnown RBP13.71□□□□□ -0.21
SCN8A-209ENST00000627620 TWF2Q6IBS0 349 aaKnown RBP13.71□□□□□ -0.21
SCN8A-209ENST00000627620 CDC26Q8NHZ8 85 aa13.71□□□□□ -0.21
SCN8A-209ENST00000627620 ARHGEF1Q92888 912 aaKnown RBP13.71□□□□□ -0.21
SCN8A-209ENST00000627620 EXT2Q93063 718 aa13.71□□□□□ -0.21
SCN8A-209ENST00000627620 ASNSD1Q9NWL6 643 aa13.71□□□□□ -0.21
SCN8A-209ENST00000627620 ABCA8O94911 1581 aa13.71□□□□□ -0.21
SCN8A-209ENST00000627620 PRDM15P57071 1507 aaPredicted RBP13.71□□□□□ -0.21
SCN8A-209ENST00000627620 HMGB1P1B2RPK0 211 aaPredicted RBP13.71□□□□□ -0.22
SCN8A-209ENST00000627620 CFLARO15519 480 aa13.71□□□□□ -0.22
SCN8A-209ENST00000627620 HUS1O60921 280 aa13.71□□□□□ -0.22
SCN8A-209ENST00000627620 PPARGP37231 505 aaPredicted RBP13.71□□□□□ -0.22
SCN8A-209ENST00000627620 BARHL2Q9NY43 387 aa13.71□□□□□ -0.22
SCN8A-209ENST00000627620 MAP3K4Q9Y6R4 1608 aa13.71□□□□□ -0.22
SCN8A-209ENST00000627620 CHEK2O96017 543 aa13.71□□□□□ -0.22
SCN8A-209ENST00000627620 P4HBP07237 508 aaKnown RBP13.71□□□□□ -0.22
SCN8A-209ENST00000627620 SFNP31947 248 aa13.71□□□□□ -0.22
SCN8A-209ENST00000627620 HP1BP3Q5SSJ5 553 aaPredicted RBP13.71□□□□□ -0.22
SCN8A-209ENST00000627620 SWSAP1Q6NVH7 229 aa13.71□□□□□ -0.22
SCN8A-209ENST00000627620 ADGRF4Q8IZF3 695 aa13.71□□□□□ -0.22
SCN8A-209ENST00000627620 MTA3Q9BTC8 594 aa13.71□□□□□ -0.22
SCN8A-209ENST00000627620 SLITRK6Q9H5Y7 841 aa13.71□□□□□ -0.22
SCN8A-209ENST00000627620 KLHL8Q9P2G9 620 aaPredicted RBP13.71□□□□□ -0.22
SCN8A-209ENST00000627620 POTEFA5A3E0 1075 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 F5H6K3 240 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 SRGAP2O75044 1071 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 KRT37O76014 449 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 CALB1P05937 261 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 PRR29P0C7W0 189 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 POTEIP0CG38 1075 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 QARSP47897 775 aaKnown RBP13.7□□□□□ -0.22
SCN8A-209ENST00000627620 ARL4CP56559 192 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 KLRC3Q07444 240 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 POTEGQ6S5H5 508 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 POTEEQ6S8J3 1075 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 PSPC1Q8WXF1 523 aaKnown RBP13.7□□□□□ -0.22
SCN8A-209ENST00000627620 PLAAQ9Y263 795 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 HSPA8P11142 646 aaKnown RBP13.7□□□□□ -0.22
SCN8A-209ENST00000627620 GPSM2P81274 684 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 TFDP2Q14188 446 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 ALX1Q15699 326 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 QRICH1Q2TAL8 776 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 C11orf70Q9BRQ4 267 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 GABBR1Q9UBS5 961 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 ADRA2BP18089 450 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 SPP2Q13103 211 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 GLE1Q53GS7 698 aaKnown RBP13.7□□□□□ -0.22
SCN8A-209ENST00000627620 TAF1BQ53T94 588 aaPredicted RBP13.7□□□□□ -0.22
SCN8A-209ENST00000627620 FMR1NBQ8N0W7 255 aaPredicted RBP13.7□□□□□ -0.22
SCN8A-209ENST00000627620 MRPL46Q9H2W6 279 aaKnown RBP13.7□□□□□ -0.22
SCN8A-209ENST00000627620 UBE4BO95155 1302 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 PAMP19021 973 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 YWHAHQ04917 246 aaPredicted RBP13.7□□□□□ -0.22
SCN8A-209ENST00000627620 ORC2Q13416 577 aaPredicted RBP13.7□□□□□ -0.22
SCN8A-209ENST00000627620 RHPN2Q8IUC4 686 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 ALKBH8Q96BT7 664 aaKnown RBP13.7□□□□□ -0.22
SCN8A-209ENST00000627620 TPX2Q9ULW0 747 aaKnown RBP13.7□□□□□ -0.22
SCN8A-209ENST00000627620 POLIQ9UNA4 740 aa13.7□□□□□ -0.22
SCN8A-209ENST00000627620 SHROOM2Q13796 1616 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 GSG1L2A8MUP6 293 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 F8W8V4 182 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 ESRRAP11474 423 aaPredicted RBP13.69□□□□□ -0.22
SCN8A-209ENST00000627620 STAT3P40763 770 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 VAMP7P51809 220 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 E2F5Q15329 346 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 HSP90AA5PQ58FG0 334 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 SRRM1Q8IYB3 904 aaKnown RBP13.69□□□□□ -0.22
SCN8A-209ENST00000627620 TTC13Q8NBP0 860 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 OLA1Q9NTK5 396 aaKnown RBP13.69□□□□□ -0.22
SCN8A-209ENST00000627620 STRIP2Q9ULQ0 834 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 HEY1Q9Y5J3 304 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 PLEKHG2Q9H7P9 1386 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 RPSAP08865 295 aaKnown RBP13.69□□□□□ -0.22
SCN8A-209ENST00000627620 INPP1P49441 399 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 OCRLQ01968 901 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 SCN4BQ8IWT1 228 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 NDUFAF2Q8N183 169 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 BEST2Q8NFU1 509 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 IRAK4Q9NWZ3 460 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 DONSONQ9NYP3 566 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 FAF1Q9UNN5 650 aaPredicted RBP13.69□□□□□ -0.22
SCN8A-209ENST00000627620 HSPA4LO95757 839 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 NUGGCQ68CJ6 796 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 TTC25Q96NG3 672 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 ISCA1Q9BUE6 129 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 ARHGAP31Q2M1Z3 1444 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 RFX7Q2KHR2 1363 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 PPFIA2O75334 1257 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 TTLL4Q14679 1199 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 GANCQ8TET4 914 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 EXOC4Q96A65 974 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 HECW2Q9P2P5 1572 aa13.69□□□□□ -0.22
SCN8A-209ENST00000627620 COPEO14579 308 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms