RNA–Protein interactions for RNA: ENST00000627320.2

TCF4-258, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-258ENST00000627320 HNRNPUQ00839 825 aaKnown RBP eCLIP9.78□□□□□ -0.84
TCF4-258ENST00000627320 SEC23AQ15436 765 aa9.78□□□□□ -0.84
TCF4-258ENST00000627320 ATAT1Q5SQI0 421 aa9.78□□□□□ -0.84
TCF4-258ENST00000627320 PDE12Q6L8Q7 609 aaKnown RBP9.78□□□□□ -0.84
TCF4-258ENST00000627320 CCDC149Q6ZUS6 474 aa9.78□□□□□ -0.84
TCF4-258ENST00000627320 VPS52Q8N1B4 723 aa9.78□□□□□ -0.84
TCF4-258ENST00000627320 SLC44A3Q8N4M1 653 aa9.78□□□□□ -0.84
TCF4-258ENST00000627320 ESR2Q92731 530 aa9.78□□□□□ -0.84
TCF4-258ENST00000627320 LPPQ93052 612 aa9.78□□□□□ -0.84
TCF4-258ENST00000627320 PGBD1Q96JS3 809 aa9.78□□□□□ -0.84
TCF4-258ENST00000627320 IL25Q9H293 177 aa9.78□□□□□ -0.84
TCF4-258ENST00000627320 ATP6V0A4Q9HBG4 840 aa9.78□□□□□ -0.84
TCF4-258ENST00000627320 NGRNQ9NPE2 291 aaKnown RBP9.78□□□□□ -0.84
TCF4-258ENST00000627320 CDV3Q9UKY7 258 aaKnown RBP9.78□□□□□ -0.84
TCF4-258ENST00000627320 USP18Q9UMW8 372 aa9.78□□□□□ -0.84
TCF4-258ENST00000627320 SMG5Q9UPR3 1016 aaKnown RBP9.78□□□□□ -0.84
TCF4-258ENST00000627320 PCDHA2Q9Y5H9 948 aa9.78□□□□□ -0.84
TCF4-258ENST00000627320 KDM3AQ9Y4C1 1321 aa9.78□□□□□ -0.84
TCF4-258ENST00000627320 GCN1Q92616 2671 aaKnown RBP9.77□□□□□ -0.85
TCF4-258ENST00000627320 hCG_1642624A0A1W2PR95 340 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 PALM3A6NDB9 673 aaPredicted RBP9.77□□□□□ -0.85
TCF4-258ENST00000627320 ZBTB42B2RXF5 422 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 M0QZ92 97 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 DDX39AO00148 427 aaKnown RBP9.77□□□□□ -0.85
TCF4-258ENST00000627320 MEIS2O14770 477 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 CSDE1O75534 798 aaKnown RBP9.77□□□□□ -0.85
TCF4-258ENST00000627320 RFPL2O75678 378 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 SPATA31D3P0C874 917 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 KLRC1P26715 233 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 GBP2P32456 591 aaPredicted RBP9.77□□□□□ -0.85
TCF4-258ENST00000627320 BCAR1P56945 870 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 TBC1D8BQ0IIM8 1120 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 SPEM2Q0P670 501 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 MCMDC2Q4G0Z9 681 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 KIAA0319Q5VV43 1072 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 SPATA31D4Q6ZUB0 917 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 SLC24A5Q71RS6 500 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 GPR149Q86SP6 731 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 KIAA0319LQ8IZA0 1049 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 SEPT1Q8WYJ6 367 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 TMEM117Q9H0C3 514 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 ARHGEF3Q9NR81 526 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 HELLSQ9NRZ9 838 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 TMEM161AQ9NX61 479 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 SPG21Q9NZD8 308 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 DNAJB4Q9UDY4 337 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 PUF60Q9UHX1 559 aaKnown RBP9.77□□□□□ -0.85
TCF4-258ENST00000627320 USTQ9Y2C2 406 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 TAF6LQ9Y6J9 622 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 GREB1Q4ZG55 1949 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 EML5Q05BV3 1969 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 ZMYM6O95789 1325 aa9.77□□□□□ -0.85
TCF4-258ENST00000627320 KIF26AQ9ULI4 1882 aaPredicted RBP9.76□□□□□ -0.85
TCF4-258ENST00000627320 SDK1Q7Z5N4 2213 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 NBEAQ8NFP9 2946 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 SMIM35A0A1B0GVV1 85 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 KINO60870 393 aaKnown RBP9.76□□□□□ -0.85
TCF4-258ENST00000627320 ZC3H11AO75152 810 aaKnown RBP eCLIP9.76□□□□□ -0.85
TCF4-258ENST00000627320 ATP4AP20648 1035 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 FAM189BP81408 668 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 CSTF1Q05048 431 aaKnown RBP9.76□□□□□ -0.85
TCF4-258ENST00000627320 PTPN14Q15678 1187 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 LETM2Q2VYF4 491 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 PCNX4Q63HM2 1172 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 CABP7Q86V35 215 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 ECHDC2Q86YB7 292 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 CMTR1Q8N1G2 835 aaKnown RBP9.76□□□□□ -0.85
TCF4-258ENST00000627320 LRRC43Q8N309 656 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 PJA1Q8NG27 643 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 SENP7Q9BQF6 1050 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 MYL10Q9BUA6 226 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 MAF1Q9H063 256 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 SEMA4AQ9H3S1 761 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 SMARCAD1Q9H4L7 1026 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 RIOX1Q9H6W3 641 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 SIT1Q9Y3P8 196 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 PCDHB15Q9Y5E8 787 aa9.76□□□□□ -0.85
TCF4-258ENST00000627320 FSD2A1L4K1 749 aa9.75□□□□□ -0.85
TCF4-258ENST00000627320 F8W810 466 aa9.75□□□□□ -0.85
TCF4-258ENST00000627320 GPR32O75388 356 aa9.75□□□□□ -0.85
TCF4-258ENST00000627320 CLCN3P51790 818 aa9.75□□□□□ -0.85
TCF4-258ENST00000627320 CLCN4P51793 760 aa9.75□□□□□ -0.85
TCF4-258ENST00000627320 AFF1P51825 1210 aaKnown RBP9.75□□□□□ -0.85
TCF4-258ENST00000627320 ACTR2P61160 394 aa9.75□□□□□ -0.85
TCF4-258ENST00000627320 ITGB3BPQ13352 177 aaPredicted RBP9.75□□□□□ -0.85
TCF4-258ENST00000627320 SNW1Q13573 536 aaKnown RBP9.75□□□□□ -0.85
TCF4-258ENST00000627320 GRM4Q14833 912 aa9.75□□□□□ -0.85
TCF4-258ENST00000627320 RAB11FIP4Q86YS3 637 aa9.75□□□□□ -0.85
TCF4-258ENST00000627320 CCDC60Q8IWA6 550 aaPredicted RBP9.75□□□□□ -0.85
TCF4-258ENST00000627320 SMARCC2Q8TAQ2 1214 aa9.75□□□□□ -0.85
TCF4-258ENST00000627320 ACSF2Q96CM8 615 aaPredicted RBP9.75□□□□□ -0.85
TCF4-258ENST00000627320 KLHL5Q96PQ7 755 aa9.75□□□□□ -0.85
TCF4-258ENST00000627320 GBP3Q9H0R5 595 aa9.75□□□□□ -0.85
TCF4-258ENST00000627320 SFXN1Q9H9B4 322 aa9.75□□□□□ -0.85
TCF4-258ENST00000627320 C1orf112Q9NSG2 853 aa9.75□□□□□ -0.85
TCF4-258ENST00000627320 DZANK1Q9NVP4 752 aa9.75□□□□□ -0.85
TCF4-258ENST00000627320 SPATA6Q9NWH7 488 aaPredicted RBP9.75□□□□□ -0.85
TCF4-258ENST00000627320 WNT16Q9UBV4 365 aa9.75□□□□□ -0.85
TCF4-258ENST00000627320 UBIAD1Q9Y5Z9 338 aa9.75□□□□□ -0.85
TCF4-258ENST00000627320 SQORQ9Y6N5 450 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms