RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 V9GYY5 206 aaPredicted RBP24.15■■□□□ 1.46
PNKP-220ENST00000627232 ANO5Q75V66 913 aa24.15■■□□□ 1.46
PNKP-220ENST00000627232 MAEAQ7L5Y9 396 aa24.15■■□□□ 1.46
PNKP-220ENST00000627232 UBXN4Q92575 508 aa24.15■■□□□ 1.46
PNKP-220ENST00000627232 IFIH1Q9BYX4 1025 aaKnown RBP24.15■■□□□ 1.46
PNKP-220ENST00000627232 RCCD1A6NED2 376 aa24.14■■□□□ 1.45
PNKP-220ENST00000627232 PJA2O43164 708 aa24.14■■□□□ 1.45
PNKP-220ENST00000627232 TLR2O60603 784 aa24.14■■□□□ 1.45
PNKP-220ENST00000627232 STBD1O95210 358 aa24.14■■□□□ 1.45
PNKP-220ENST00000627232 SLC9A1P19634 815 aa24.14■■□□□ 1.45
PNKP-220ENST00000627232 IRX3P78415 501 aaPredicted RBP24.14■■□□□ 1.45
PNKP-220ENST00000627232 CYP27A1Q02318 531 aa24.14■■□□□ 1.45
PNKP-220ENST00000627232 PPIL2Q13356 520 aa24.14■■□□□ 1.45
PNKP-220ENST00000627232 HSP90AA2PQ14568 343 aaPredicted RBP24.14■■□□□ 1.45
PNKP-220ENST00000627232 ERCC6LQ2NKX8 1250 aa24.14■■□□□ 1.45
PNKP-220ENST00000627232 UTP14CQ5TAP6 766 aaKnown RBP24.14■■□□□ 1.45
PNKP-220ENST00000627232 MIS18BP1Q6P0N0 1132 aa24.14■■□□□ 1.45
PNKP-220ENST00000627232 ABHD15Q6UXT9 468 aa24.14■■□□□ 1.45
PNKP-220ENST00000627232 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.14■■□□□ 1.45
PNKP-220ENST00000627232 HAUS6Q7Z4H7 955 aa24.14■■□□□ 1.45
PNKP-220ENST00000627232 CEP112Q8N8E3 955 aa24.14■■□□□ 1.45
PNKP-220ENST00000627232 LACRTQ9GZZ8 138 aa24.14■■□□□ 1.45
PNKP-220ENST00000627232 SPATC1LQ9H0A9 340 aa24.14■■□□□ 1.45
PNKP-220ENST00000627232 IKZF4Q9H2S9 585 aa24.14■■□□□ 1.45
PNKP-220ENST00000627232 C17orf75Q9HAS0 396 aa24.14■■□□□ 1.45
PNKP-220ENST00000627232 DAAM1Q9Y4D1 1078 aa24.14■■□□□ 1.45
PNKP-220ENST00000627232 MYH9P35579 1960 aaKnown RBP24.13■■□□□ 1.45
PNKP-220ENST00000627232 SCN4AP35499 1836 aa24.13■■□□□ 1.45
PNKP-220ENST00000627232 MAPK13O15264 365 aa24.13■■□□□ 1.45
PNKP-220ENST00000627232 UCHL3P15374 230 aa24.13■■□□□ 1.45
PNKP-220ENST00000627232 EPHX2P34913 555 aa24.13■■□□□ 1.45
PNKP-220ENST00000627232 CYP2J2P51589 502 aa24.13■■□□□ 1.45
PNKP-220ENST00000627232 ALDH5A1P51649 535 aaPredicted RBP24.13■■□□□ 1.45
PNKP-220ENST00000627232 ACTR2P61160 394 aa24.13■■□□□ 1.45
PNKP-220ENST00000627232 RAPGEF1Q13905 1077 aa24.13■■□□□ 1.45
PNKP-220ENST00000627232 ASIC2Q16515 512 aa24.13■■□□□ 1.45
PNKP-220ENST00000627232 TDRD12Q587J7 1177 aaKnown RBP24.13■■□□□ 1.45
PNKP-220ENST00000627232 PLA2G4FQ68DD2 849 aa24.13■■□□□ 1.45
PNKP-220ENST00000627232 KIFAP3Q92845 792 aa24.13■■□□□ 1.45
PNKP-220ENST00000627232 OTUD5Q96G74 571 aa24.13■■□□□ 1.45
PNKP-220ENST00000627232 TMEM150BA6NC51 233 aa24.12■■□□□ 1.45
PNKP-220ENST00000627232 ZNF862O60290 1169 aa24.12■■□□□ 1.45
PNKP-220ENST00000627232 EXOC3O60645 756 aa24.12■■□□□ 1.45
PNKP-220ENST00000627232 COPB2P35606 906 aa24.12■■□□□ 1.45
PNKP-220ENST00000627232 NPEPPSP55786 919 aa24.12■■□□□ 1.45
PNKP-220ENST00000627232 WHAMMP3Q1A5X7 153 aa24.12■■□□□ 1.45
PNKP-220ENST00000627232 FAM102BQ5T8I3 360 aa24.12■■□□□ 1.45
PNKP-220ENST00000627232 SIX2Q9NPC8 291 aa24.12■■□□□ 1.45
PNKP-220ENST00000627232 LUC7LQ9NQ29 371 aaKnown RBP24.12■■□□□ 1.45
PNKP-220ENST00000627232 EXOC7Q9UPT5 735 aa24.12■■□□□ 1.45
PNKP-220ENST00000627232 AGTPBP1Q9UPW5 1226 aa24.12■■□□□ 1.45
PNKP-220ENST00000627232 BZW2Q9Y6E2 419 aaKnown RBP24.12■■□□□ 1.45
PNKP-220ENST00000627232 SUPT20HL2P0C7V6 817 aa24.11■■□□□ 1.45
PNKP-220ENST00000627232 ACTN1P12814 892 aa24.11■■□□□ 1.45
PNKP-220ENST00000627232 FMO5P49326 533 aa24.11■■□□□ 1.45
PNKP-220ENST00000627232 SMTNP53814 917 aa24.11■■□□□ 1.45
PNKP-220ENST00000627232 PEX3P56589 373 aa24.11■■□□□ 1.45
PNKP-220ENST00000627232 TUBB4BP68371 445 aa24.11■■□□□ 1.45
PNKP-220ENST00000627232 AMPD2Q01433 879 aa24.11■■□□□ 1.45
PNKP-220ENST00000627232 APBA1Q02410 837 aa24.11■■□□□ 1.45
PNKP-220ENST00000627232 SWSAP1Q6NVH7 229 aa24.11■■□□□ 1.45
PNKP-220ENST00000627232 RSRC2Q7L4I2 434 aaKnown RBP24.11■■□□□ 1.45
PNKP-220ENST00000627232 SRGAP1Q7Z6B7 1085 aa24.11■■□□□ 1.45
PNKP-220ENST00000627232 SPIRE2Q8WWL2 714 aa24.11■■□□□ 1.45
PNKP-220ENST00000627232 CLMNQ96JQ2 1002 aa24.11■■□□□ 1.45
PNKP-220ENST00000627232 GCNT4Q9P109 453 aa24.11■■□□□ 1.45
PNKP-220ENST00000627232 ZC3H4Q9UPT8 1303 aaKnown RBP24.11■■□□□ 1.45
PNKP-220ENST00000627232 LRRC37A2A6NM11 1700 aa24.11■■□□□ 1.45
PNKP-220ENST00000627232 ANO9A1A5B4 782 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 ATG7O95352 703 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 SLC25A27O95847 323 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 EDNRBP24530 442 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 MAGEA1P43355 309 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 RTP1P59025 263 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 CNTN2Q02246 1040 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 MCPH1Q8NEM0 835 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 SECISBP2LQ93073 1101 aaKnown RBP24.1■■□□□ 1.45
PNKP-220ENST00000627232 CEP170P1Q96L14 293 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 SPAG5Q96R06 1193 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 ASCC2Q9H1I8 757 aaPredicted RBP24.1■■□□□ 1.45
PNKP-220ENST00000627232 IGSF9BQ9UPX0 1349 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 POTEB2H3BUK9 544 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 DGAT1O75907 488 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 KRT13P13646 458 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 ANXA13P27216 316 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 MCCD1P59942 119 aaPredicted RBP24.1■■□□□ 1.45
PNKP-220ENST00000627232 KLHL30Q0D2K2 578 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 BFSP1Q12934 665 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 DMP1Q13316 513 aaPredicted RBP24.1■■□□□ 1.45
PNKP-220ENST00000627232 TTLL12Q14166 644 aaPredicted RBP24.1■■□□□ 1.45
PNKP-220ENST00000627232 INTS8Q75QN2 995 aaKnown RBP24.1■■□□□ 1.45
PNKP-220ENST00000627232 SH2D3AQ9BRG2 576 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 NTPCRQ9BSD7 190 aaKnown RBP24.1■■□□□ 1.45
PNKP-220ENST00000627232 GPRC5CQ9NQ84 441 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 PDLIM7Q9NR12 457 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 TFR2Q9UP52 801 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 FHOD1Q9Y613 1164 aa24.1■■□□□ 1.45
PNKP-220ENST00000627232 SLC16A4O15374 487 aa24.09■■□□□ 1.45
PNKP-220ENST00000627232 CNMDO75829 334 aa24.09■■□□□ 1.45
PNKP-220ENST00000627232 PRKCIP41743 596 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms