RNA–Protein interactions for RNA: ENST00000627000.1

CHRNA4-209, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,192 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-209ENST00000627000 UCHL3P15374 230 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 KIF5AQ12840 1032 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 TTLL12Q14166 644 aaPredicted RBP21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 SLC9C1Q4G0N8 1177 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 FBXO38Q6PIJ6 1188 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 GBP6Q6ZN66 633 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 HAUS6Q7Z4H7 955 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 PRRT2Q7Z6L0 340 aaPredicted RBP21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 CCDC60Q8IWA6 550 aaPredicted RBP21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 SMAP1Q8IYB5 467 aaPredicted RBP21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 EPC1Q9H2F5 836 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 PCIF1Q9H4Z3 704 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 GCNT4Q9P109 453 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 CGNQ9P2M7 1197 aaKnown RBP21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 FRMD4BQ9Y2L6 1034 aa21.5■■□□□ 1.03
CHRNA4-209ENST00000627000 ARID2Q68CP9 1835 aa21.49■■□□□ 1.03
CHRNA4-209ENST00000627000 NFASCO94856 1347 aa21.49■■□□□ 1.03
CHRNA4-209ENST00000627000 TRIM49P0CI25 452 aa21.49■■□□□ 1.03
CHRNA4-209ENST00000627000 TRIM49CP0CI26 452 aa21.49■■□□□ 1.03
CHRNA4-209ENST00000627000 SOX10P56693 466 aa21.49■■□□□ 1.03
CHRNA4-209ENST00000627000 ACTR2P61160 394 aa21.49■■□□□ 1.03
CHRNA4-209ENST00000627000 PPATQ06203 517 aa21.49■■□□□ 1.03
CHRNA4-209ENST00000627000 GNPTABQ3T906 1256 aa21.49■■□□□ 1.03
CHRNA4-209ENST00000627000 RIOX2Q8IUF8 465 aa21.49■■□□□ 1.03
CHRNA4-209ENST00000627000 DRC1Q96MC2 740 aa21.49■■□□□ 1.03
CHRNA4-209ENST00000627000 PAGR1Q9BTK6 254 aa21.49■■□□□ 1.03
CHRNA4-209ENST00000627000 PUF60Q9UHX1 559 aaKnown RBP21.49■■□□□ 1.03
CHRNA4-209ENST00000627000 EXOC3O60645 756 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 AMPD2Q01433 879 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 GJB7Q6PEY0 223 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 ERO1BQ86YB8 467 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 ANKRD13AQ8IZ07 590 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 CDHR1Q96JP9 859 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 CEP170P1Q96L14 293 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 ACCSQ96QU6 501 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 AIPL1Q9NZN9 384 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 HDAC6Q9UBN7 1215 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 STAM2O75886 525 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 ATP1A1P05023 1023 aaKnown RBP21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 PSAPP07602 524 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 EPHX2P34913 555 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 MAGEA1P43355 309 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 GTF2BQ00403 316 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 STXBP2Q15833 593 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 NCAPG2Q86XI2 1143 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 SLC9A9Q8IVB4 645 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 ZSWIM2Q8NEG5 633 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 DNERQ8NFT8 737 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 GOLGA5Q8TBA6 731 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 IWS1Q96ST2 819 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 CBWD1Q9BRT8 395 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 KIFC3Q9BVG8 833 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 SPATC1LQ9H0A9 340 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 TMEM206Q9H813 350 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 MLXIPQ9HAP2 919 aa21.48■■□□□ 1.03
CHRNA4-209ENST00000627000 ALDH5A1P51649 535 aaPredicted RBP21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 NCKAP1LP55160 1127 aa21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 IRX3P78415 501 aaPredicted RBP21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 ASIC2Q16515 512 aa21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 CBWD6Q4V339 395 aa21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 CBWD3Q5JTY5 395 aa21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 CBWD5Q5RIA9 395 aa21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 TEX35Q5T0J7 233 aa21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 DPY19L2Q6NUT2 758 aa21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 ABHD15Q6UXT9 468 aa21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 SEPT14Q6ZU15 432 aa21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 RSRC2Q7L4I2 434 aaKnown RBP21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 PROCA1Q8NCQ7 364 aaPredicted RBP21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 ZNF526Q8TF50 670 aaPredicted RBP21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 ATP6V0A1Q93050 837 aa21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 TIPINQ9BVW5 301 aa21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 ASCC2Q9H1I8 757 aaPredicted RBP21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 SPDYE5A6NIY4 337 aa21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 FMO5P49326 533 aa21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 KLHL30Q0D2K2 578 aa21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 ALCAMQ13740 583 aa21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 CYFIP1Q7L576 1253 aa21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 BSNDQ8WZ55 320 aa21.47■■□□□ 1.03
CHRNA4-209ENST00000627000 GTPBP10A4D1E9 387 aaKnown RBP21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 EIF3JO75822 258 aaKnown RBP21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 CNMDO75829 334 aa21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 USP50Q70EL3 339 aaPredicted RBP21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 OTUD6AQ7L8S5 288 aa21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 SRGAP1Q7Z6B7 1085 aa21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 ANKRD13CQ8N6S4 541 aa21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 SECISBP2LQ93073 1101 aaKnown RBP21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 L3MBTL3Q96JM7 780 aaPredicted RBP21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 SPAG5Q96R06 1193 aa21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 TSGA10Q9BZW7 698 aa21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 MAF1Q9H063 256 aa21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 ST6GALNAC4Q9H4F1 302 aa21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 SEPT9Q9UHD8 586 aaPredicted RBP21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 MYO6Q9UM54 1294 aa21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 MYH9P35579 1960 aaKnown RBP21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 SOWAHBA6NEL2 793 aa21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 CCDC169A6NNP5 214 aa21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 NF2P35240 595 aa21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 PRKCEQ02156 737 aa21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 IRF2BP2Q7Z5L9 587 aa21.46■■□□□ 1.03
CHRNA4-209ENST00000627000 EHBP1Q8NDI1 1231 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms