RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 CAMK4Q16566 473 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 PTGISQ16647 500 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 ARSHQ5FYA8 562 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 FAM102BQ5T8I3 360 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 EFCAB12Q6NXP0 572 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 KANK3Q6NY19 840 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 SLC39A5Q6ZMH5 540 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 RUFY4Q6ZNE9 571 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 NECAB2Q7Z6G3 386 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 SH3RF1Q7Z6J0 888 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 EXOC8Q8IYI6 725 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 LRRC71Q8N4P6 559 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 SLC43A3Q8NBI5 491 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 RETREG2Q8NC44 543 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 MCPH1Q8NEM0 835 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 DDX12PQ92771 950 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 TMEM143Q96AN5 459 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 JPH2Q9BR39 696 aaPredicted RBP9.45□□□□□ -0.9
SGMS1-211ENST00000626236 BLZF1Q9H2G9 400 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 DHX33Q9H6R0 707 aaKnown RBP9.45□□□□□ -0.9
SGMS1-211ENST00000626236 POLD4Q9HCU8 107 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 XPNPEP1Q9NQW7 623 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 TRMT13Q9NUP7 481 aaKnown RBP9.45□□□□□ -0.9
SGMS1-211ENST00000626236 KCND2Q9NZV8 630 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 HOOK1Q9UJC3 728 aaKnown RBP9.45□□□□□ -0.9
SGMS1-211ENST00000626236 NOD1Q9Y239 953 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 SIP14410 1827 aa9.45□□□□□ -0.9
SGMS1-211ENST00000626236 ALPK3Q96L96 1907 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 IGKV6-21A0A0C4DH24 114 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 MBLAC1A4D2B0 266 aaPredicted RBP9.44□□□□□ -0.9
SGMS1-211ENST00000626236 RSPH10B2B2RC85 870 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 GAS2O43903 313 aaKnown RBP9.44□□□□□ -0.9
SGMS1-211ENST00000626236 B4GALT4O60513 344 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 PQBP1O60828 265 aaKnown RBP9.44□□□□□ -0.9
SGMS1-211ENST00000626236 HIP1RO75146 1068 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 TBCAO75347 108 aaKnown RBP9.44□□□□□ -0.9
SGMS1-211ENST00000626236 RSPH10BP0C881 870 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 IDEP14735 1019 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 GUCY2CP25092 1073 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 TMOD1P28289 359 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 DNM2P50570 870 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 CDK7P50613 346 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 ASIC1P78348 528 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 ADAM17P78536 824 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 DRP2Q13474 957 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 CUL4BQ13620 913 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 GIT2Q14161 759 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 POSTNQ15063 836 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 KLHL40Q2TBA0 621 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 TRIM60Q495X7 471 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 ERCC4Q92889 916 aaPredicted RBP9.44□□□□□ -0.9
SGMS1-211ENST00000626236 C7orf25Q9BPX7 421 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 REEP2Q9BRK0 252 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 TIPINQ9BVW5 301 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 SEZ6LQ9BYH1 1024 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 TRIM9Q9C026 710 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 FAM49AQ9H0Q0 323 aaPredicted RBP9.44□□□□□ -0.9
SGMS1-211ENST00000626236 TRPV6Q9H1D0 765 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 POLR3FQ9H1D9 316 aaPredicted RBP9.44□□□□□ -0.9
SGMS1-211ENST00000626236 NUP62CLQ9H1M0 184 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 CLSTN2Q9H4D0 955 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 ZHX3Q9H4I2 956 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 GPRC5CQ9NQ84 441 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 PDLIM7Q9NR12 457 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 RYDENQ9NUL5 291 aaKnown RBP9.44□□□□□ -0.9
SGMS1-211ENST00000626236 SUCLA2Q9P2R7 463 aaPredicted RBP9.44□□□□□ -0.9
SGMS1-211ENST00000626236 AKT3Q9Y243 479 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 ATP11BQ9Y2G3 1177 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 PCDHA2Q9Y5H9 948 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 MROH7Q68CQ1 1323 aa9.44□□□□□ -0.9
SGMS1-211ENST00000626236 KIAA0100Q14667 2235 aaKnown RBP9.43□□□□□ -0.9
SGMS1-211ENST00000626236 SMIM35A0A1B0GVV1 85 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 TLR3O15455 904 aaKnown RBP9.43□□□□□ -0.9
SGMS1-211ENST00000626236 TRAK2O60296 914 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 FAM13AO94988 1023 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 MYL1P05976 194 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 MDM2Q00987 491 aaPredicted RBP9.43□□□□□ -0.9
SGMS1-211ENST00000626236 DPYDQ12882 1025 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 SNX17Q15036 470 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 SKOR2Q2VWA4 1001 aaPredicted RBP9.43□□□□□ -0.9
SGMS1-211ENST00000626236 IER5Q5VY09 327 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 CAVIN1Q6NZI2 390 aaKnown RBP9.43□□□□□ -0.9
SGMS1-211ENST00000626236 RHPN2Q8IUC4 686 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 FAM126BQ8IXS8 530 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 ELOA2Q8IYF1 753 aaPredicted RBP9.43□□□□□ -0.9
SGMS1-211ENST00000626236 LINC01465Q8N7H1 131 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 DNAJB3Q8WWF6 145 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 TCP11Q8WWU5 503 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 PSPC1Q8WXF1 523 aaKnown RBP9.43□□□□□ -0.9
SGMS1-211ENST00000626236 KIFAP3Q92845 792 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 DNAJC19Q96DA6 116 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 DRC1Q96MC2 740 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 MAP7D2Q96T17 732 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 PPP1R16BQ96T49 567 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 ODF2LQ9ULJ1 636 aa9.43□□□□□ -0.9
SGMS1-211ENST00000626236 TANC1Q9C0D5 1861 aa9.42□□□□□ -0.9
SGMS1-211ENST00000626236 SFI1A8K8P3 1242 aa9.42□□□□□ -0.9
SGMS1-211ENST00000626236 DCDC2CA8MYV0 355 aa9.42□□□□□ -0.9
SGMS1-211ENST00000626236 SMC2O95347 1197 aa9.42□□□□□ -0.9
SGMS1-211ENST00000626236 VTNP04004 478 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms