RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 MBD6Q96DN6 1003 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 DDX11Q96FC9 970 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 CHAMP1Q96JM3 812 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 BTBD7Q9P203 1132 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 QSER1Q2KHR3 1735 aa4.51□□□□□ -1.69
CDKL5-208ENST00000624953 CCDC144AA2RUR9 1427 aa4.5□□□□□ -1.69
CDKL5-208ENST00000624953 MAFO75444 373 aaPredicted RBP4.5□□□□□ -1.69
CDKL5-208ENST00000624953 MPIG6BO95866 241 aa4.5□□□□□ -1.69
CDKL5-208ENST00000624953 C4BPAP04003 597 aaKnown RBP4.5□□□□□ -1.69
CDKL5-208ENST00000624953 CHGBP05060 677 aa4.5□□□□□ -1.69
CDKL5-208ENST00000624953 SDSP20132 328 aa4.5□□□□□ -1.69
CDKL5-208ENST00000624953 GJA4P35212 333 aa4.5□□□□□ -1.69
CDKL5-208ENST00000624953 SLURP1P55000 103 aa4.5□□□□□ -1.69
CDKL5-208ENST00000624953 JAM2P57087 298 aa4.5□□□□□ -1.69
CDKL5-208ENST00000624953 PABPC4Q13310 644 aaKnown RBP eCLIP4.5□□□□□ -1.69
CDKL5-208ENST00000624953 EZH2Q15910 746 aaKnown RBP4.5□□□□□ -1.69
CDKL5-208ENST00000624953 CD276Q5ZPR3 534 aa4.5□□□□□ -1.69
CDKL5-208ENST00000624953 ZCCHC8Q6NZY4 707 aaKnown RBP4.5□□□□□ -1.69
CDKL5-208ENST00000624953 ARHGAP36Q6ZRI8 547 aa4.5□□□□□ -1.69
CDKL5-208ENST00000624953 C16orf86Q6ZW13 317 aa4.5□□□□□ -1.69
CDKL5-208ENST00000624953 KRT27Q7Z3Y8 459 aa4.5□□□□□ -1.69
CDKL5-208ENST00000624953 RBM12BQ8IXT5 1001 aaKnown RBP4.5□□□□□ -1.69
CDKL5-208ENST00000624953 CARFQ8N187 725 aa4.5□□□□□ -1.69
CDKL5-208ENST00000624953 MAGEB10Q96LZ2 347 aaPredicted RBP4.5□□□□□ -1.69
CDKL5-208ENST00000624953 IPO9Q96P70 1041 aaKnown RBP4.5□□□□□ -1.69
CDKL5-208ENST00000624953 TMEM209Q96SK2 561 aa4.5□□□□□ -1.69
CDKL5-208ENST00000624953 CD244Q9BZW8 370 aa4.5□□□□□ -1.69
CDKL5-208ENST00000624953 B3GALT1Q9Y5Z6 326 aa4.5□□□□□ -1.69
CDKL5-208ENST00000624953 PAPPAQ13219 1627 aa4.5□□□□□ -1.69
CDKL5-208ENST00000624953 PIK3C2GO75747 1445 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 A0A1B0GTL3 188 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 ZNF839A8K0R7 811 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 TRAF5O00463 557 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 NOBOXO60393 691 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 ASLP04424 464 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 PTPN1P18031 435 aaKnown RBP4.49□□□□□ -1.69
CDKL5-208ENST00000624953 YY1P25490 414 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 SDHAP31040 664 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 HERVK_113P62684 666 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 NKX3-2P78367 333 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 DBPQ10586 325 aaPredicted RBP4.49□□□□□ -1.69
CDKL5-208ENST00000624953 FAM50AQ14320 339 aaKnown RBP4.49□□□□□ -1.69
CDKL5-208ENST00000624953 TCEA2Q15560 299 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 TMEM177Q53S58 311 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 FAM47CQ5HY64 1035 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 FAM26FQ5R3K3 315 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 PKN3Q6P5Z2 889 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 CD300LDQ6UXZ3 194 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 OSTM1Q86WC4 334 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 ZNF761Q86XN6 746 aaPredicted RBP4.49□□□□□ -1.69
CDKL5-208ENST00000624953 HOMER1Q86YM7 354 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 NLGN4XQ8N0W4 816 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 ZCCHC14Q8WYQ9 949 aaKnown RBP4.49□□□□□ -1.69
CDKL5-208ENST00000624953 NINJ1Q92982 152 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 YTHDC1Q96MU7 727 aaKnown RBP4.49□□□□□ -1.69
CDKL5-208ENST00000624953 CAMKK2Q96RR4 588 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 KCNJ15Q99712 375 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 DLL4Q9NR61 685 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 KCND1Q9NSA2 647 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 RTEL1Q9NZ71 1219 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 RBPJLQ9UBG7 517 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 JAG2Q9Y219 1238 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 NUB1Q9Y5A7 615 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 MRPL42Q9Y6G3 142 aaKnown RBP4.49□□□□□ -1.69
CDKL5-208ENST00000624953 KAT6BQ8WYB5 2073 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 BTAF1O14981 1849 aa4.49□□□□□ -1.69
CDKL5-208ENST00000624953 ADGRB1O14514 1584 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 ADGRF5Q8IZF2 1346 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 SPATA31E1Q6ZUB1 1445 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 RRBP1Q9P2E9 1410 aaKnown RBP4.48□□□□□ -1.69
CDKL5-208ENST00000624953 A0A0G2JLL6 359 aaPredicted RBP4.48□□□□□ -1.69
CDKL5-208ENST00000624953 RASSF10A6NK89 507 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 DVL2O14641 736 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 ASMTLO95671 621 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 KNG1P01042 644 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 AOAHP28039 575 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 IGFALSP35858 605 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 MLLT6P55198 1093 aaPredicted RBP4.48□□□□□ -1.69
CDKL5-208ENST00000624953 ZNF460Q14592 562 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 STILQ15468 1287 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 DALRD3Q5D0E6 543 aaKnown RBP4.48□□□□□ -1.69
CDKL5-208ENST00000624953 GIMAP6Q6P9H5 292 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 PTRH1Q86Y79 214 aaKnown RBP4.48□□□□□ -1.69
CDKL5-208ENST00000624953 SP8Q8IXZ3 490 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 ZBTB8AQ96BR9 441 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 FEZ1Q99689 392 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 MTFR1LQ9H019 292 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 PARD6AQ9NPB6 346 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 FANCLQ9NW38 375 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 MAGEC2Q9UBF1 373 aaPredicted RBP4.48□□□□□ -1.69
CDKL5-208ENST00000624953 FAN1Q9Y2M0 1017 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 COQ6Q9Y2Z9 468 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 CD2APQ9Y5K6 639 aa4.48□□□□□ -1.69
CDKL5-208ENST00000624953 TNPO3Q9Y5L0 923 aaKnown RBP4.48□□□□□ -1.69
CDKL5-208ENST00000624953 YTHDC2Q9H6S0 1430 aaKnown RBP4.47□□□□□ -1.69
CDKL5-208ENST00000624953 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.47□□□□□ -1.69
CDKL5-208ENST00000624953 C9orf118A6NHY6 69 aa4.47□□□□□ -1.69
CDKL5-208ENST00000624953 B4E1Z4 1266 aa4.47□□□□□ -1.69
CDKL5-208ENST00000624953 CBX4O00257 560 aa4.47□□□□□ -1.69
CDKL5-208ENST00000624953 GSTA4O15217 222 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms