RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 TRMT1LQ7Z2T5 733 aaKnown RBP16.39■□□□□ 0.21
PMS1-221ENST00000624204 RPUSD2Q8IZ73 545 aaKnown RBP16.39■□□□□ 0.21
PMS1-221ENST00000624204 TGS1Q96RS0 853 aaKnown RBP16.39■□□□□ 0.21
PMS1-221ENST00000624204 BRIP1Q9BX63 1249 aa16.39■□□□□ 0.21
PMS1-221ENST00000624204 A0A1B0GVG6 124 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 RBM5P52756 815 aaKnown RBP eCLIP16.38■□□□□ 0.21
PMS1-221ENST00000624204 KLC1Q07866 573 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 TMEM266Q2M3C6 531 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 ARHGAP27Q6ZUM4 889 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 KRT25Q7Z3Z0 450 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 CCDC134Q9H6E4 229 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 RNPEPL1Q9HAU8 725 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 TMEM260Q9NX78 707 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 STK17AQ9UEE5 414 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 INTUQ9ULD6 942 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 TARSP26639 723 aaKnown RBP16.38■□□□□ 0.21
PMS1-221ENST00000624204 GALCP54803 685 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 HERC4Q5GLZ8 1057 aaPredicted RBP16.38■□□□□ 0.21
PMS1-221ENST00000624204 ZDHHC24Q6UX98 284 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 CAPN12Q6ZSI9 719 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 TBC1D16Q8TBP0 767 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 KIAA0391O15091 583 aaKnown RBP16.38■□□□□ 0.21
PMS1-221ENST00000624204 STARD3NLO95772 234 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 CALB2P22676 271 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 RPL21P46778 160 aaKnown RBP16.38■□□□□ 0.21
PMS1-221ENST00000624204 EXOC3L4Q17RC7 722 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 TSNAXIP1Q2TAA8 658 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 SLC44A5Q8NCS7 719 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 RAD54LQ92698 747 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 MCM9Q9NXL9 1143 aa16.38■□□□□ 0.21
PMS1-221ENST00000624204 BTNL10A8MVZ5 291 aa16.37■□□□□ 0.21
PMS1-221ENST00000624204 GFPT2O94808 682 aa16.37■□□□□ 0.21
PMS1-221ENST00000624204 OAS1P00973 400 aaKnown RBP16.37■□□□□ 0.21
PMS1-221ENST00000624204 PLS1Q14651 629 aa16.37■□□□□ 0.21
PMS1-221ENST00000624204 TRIP13Q15645 432 aaPredicted RBP16.37■□□□□ 0.21
PMS1-221ENST00000624204 BICDL1Q6ZP65 573 aa16.37■□□□□ 0.21
PMS1-221ENST00000624204 ASRGL1Q7L266 308 aa16.37■□□□□ 0.21
PMS1-221ENST00000624204 PIGOQ8TEQ8 1089 aa16.37■□□□□ 0.21
PMS1-221ENST00000624204 BMP2KQ9NSY1 1161 aaPredicted RBP16.37■□□□□ 0.21
PMS1-221ENST00000624204 CTNNAL1Q9UBT7 734 aa16.37■□□□□ 0.21
PMS1-221ENST00000624204 HAO1Q9UJM8 370 aa16.37■□□□□ 0.21
PMS1-221ENST00000624204 HDAC9Q9UKV0 1011 aa16.37■□□□□ 0.21
PMS1-221ENST00000624204 BAZ2AQ9UIF9 1905 aaKnown RBP16.37■□□□□ 0.21
PMS1-221ENST00000624204 NUP188Q5SRE5 1749 aa16.37■□□□□ 0.21
PMS1-221ENST00000624204 ERVV-2B6SEH9 535 aa16.37■□□□□ 0.21
PMS1-221ENST00000624204 ZBTB48P10074 688 aaPredicted RBP16.37■□□□□ 0.21
PMS1-221ENST00000624204 MAPK7Q13164 816 aa16.37■□□□□ 0.21
PMS1-221ENST00000624204 SLC35G1Q2M3R5 365 aa16.37■□□□□ 0.21
PMS1-221ENST00000624204 B4GALNT2Q8NHY0 566 aa16.37■□□□□ 0.21
PMS1-221ENST00000624204 RBM46Q8TBY0 533 aaKnown RBP16.37■□□□□ 0.21
PMS1-221ENST00000624204 UTP4Q969X6 686 aaKnown RBP16.37■□□□□ 0.21
PMS1-221ENST00000624204 ERP27Q96DN0 273 aa16.37■□□□□ 0.21
PMS1-221ENST00000624204 HES6Q96HZ4 224 aa16.37■□□□□ 0.21
PMS1-221ENST00000624204 MOV10L1Q9BXT6 1211 aaKnown RBP16.37■□□□□ 0.21
PMS1-221ENST00000624204 MKNK2Q9HBH9 465 aa16.37■□□□□ 0.21
PMS1-221ENST00000624204 ARMCX3Q9UH62 379 aaPredicted RBP16.37■□□□□ 0.21
PMS1-221ENST00000624204 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.37■□□□□ 0.21
PMS1-221ENST00000624204 PHRF1Q9P1Y6 1649 aaKnown RBP16.37■□□□□ 0.21
PMS1-221ENST00000624204 RIPK2O43353 540 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 UNC5CO95185 931 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 NR2F2P24468 414 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 EIF6P56537 245 aaKnown RBP16.36■□□□□ 0.21
PMS1-221ENST00000624204 DCAF12L1Q5VU92 463 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 SLC35G2Q8TBE7 412 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 TMOD3Q9NYL9 352 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 BZW2Q9Y6E2 419 aaKnown RBP16.36■□□□□ 0.21
PMS1-221ENST00000624204 CETN3O15182 167 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 DIXDC1Q155Q3 683 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 GALNT15Q8N3T1 639 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 STK32AQ8WU08 396 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 NAP1L3Q99457 506 aaPredicted RBP16.36■□□□□ 0.21
PMS1-221ENST00000624204 C6orf50Q9HD87 102 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 DCP1AQ9NPI6 582 aaPredicted RBP16.36■□□□□ 0.21
PMS1-221ENST00000624204 SAP30BPQ9UHR5 308 aaKnown RBP16.36■□□□□ 0.21
PMS1-221ENST00000624204 STXBP5LQ9Y2K9 1186 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 PCDH11XQ9BZA7 1347 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 PCDH11YQ9BZA8 1340 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 ATP6V1C1P21283 382 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 SETDB1Q15047 1291 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 CCDC6Q16204 474 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 ZCWPW2Q504Y3 356 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 SPDYCQ5MJ68 293 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 GLYCTKQ8IVS8 523 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 DNAJC9Q8WXX5 260 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 EZH1Q92800 747 aaPredicted RBP16.36■□□□□ 0.21
PMS1-221ENST00000624204 TFCP2L1Q9NZI6 479 aa16.36■□□□□ 0.21
PMS1-221ENST00000624204 DDX3XO00571 662 aaKnown RBP eCLIP16.35■□□□□ 0.217e-11■■■□□ 18.9
PMS1-221ENST00000624204 GNA14O95837 355 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 PCP11498 1178 aaKnown RBP16.35■□□□□ 0.21
PMS1-221ENST00000624204 BRAFP15056 766 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 GNAQP50148 359 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 PEX5P50542 639 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 CHRNDQ07001 517 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 GALNT17Q6IS24 598 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 CROCCP2Q86T23 111 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 TXLNGQ9NUQ3 528 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 ANKIB1Q9P2G1 1089 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 MAD2L2Q9UI95 211 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 DUOX1Q9NRD9 1551 aa16.35■□□□□ 0.21
PMS1-221ENST00000624204 O00370 1275 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms