RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 NUP93Q8N1F7 819 aa9.42□□□□□ -0.9
CDKL5-206ENST00000623610 ATP11CQ8NB49 1132 aa9.42□□□□□ -0.9
CDKL5-206ENST00000623610 ACMSDQ8TDX5 336 aa9.42□□□□□ -0.9
CDKL5-206ENST00000623610 ANKRD7Q92527 254 aa9.42□□□□□ -0.9
CDKL5-206ENST00000623610 TXLNGYQ9BZA5 131 aa9.42□□□□□ -0.9
CDKL5-206ENST00000623610 UBN1Q9NPG3 1134 aa9.42□□□□□ -0.9
CDKL5-206ENST00000623610 PRELID1Q9Y255 219 aa9.42□□□□□ -0.9
CDKL5-206ENST00000623610 ZNF711Q9Y462 761 aa9.42□□□□□ -0.9
CDKL5-206ENST00000623610 PCDHGA10Q9Y5H3 936 aa9.42□□□□□ -0.9
CDKL5-206ENST00000623610 FSCN2O14926 492 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 USP1O94782 785 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 HDCP19113 662 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 SDSP20132 328 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 PPARDQ03181 441 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 NAA25Q14CX7 972 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 DBN1Q16643 649 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 KRBOX4Q5JUW0 171 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 PLEKHM3Q6ZWE6 761 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 ATG9AQ7Z3C6 839 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 SLC30A5Q8TAD4 765 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 CCHCR1Q8TD31 782 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 PTCD2Q8WV60 388 aaKnown RBP9.41□□□□□ -0.9
CDKL5-206ENST00000623610 TEKT4Q8WW24 435 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 APOL5Q9BWW9 433 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 VCX3BQ9H321 246 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 ANKIB1Q9P2G1 1089 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 PCDHGB6Q9Y5F9 930 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 BCL9LQ86UU0 1499 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 TPP1O14773 563 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 POU2F2P09086 479 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 C6orf222P0C671 652 aaPredicted RBP9.41□□□□□ -0.9
CDKL5-206ENST00000623610 ATP5DP30049 168 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 IARSP41252 1262 aaKnown RBP9.41□□□□□ -0.9
CDKL5-206ENST00000623610 DRG2P55039 364 aaKnown RBP9.41□□□□□ -0.9
CDKL5-206ENST00000623610 GTF2IP78347 998 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 KIAA0753Q2KHM9 967 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 CEP135Q66GS9 1140 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 PDZD4Q76G19 769 aaPredicted RBP9.41□□□□□ -0.9
CDKL5-206ENST00000623610 FCHSD1Q86WN1 690 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 BBOF1Q8ND07 529 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 ST13P5Q8NFI4 369 aaPredicted RBP9.41□□□□□ -0.9
CDKL5-206ENST00000623610 DENND1AQ8TEH3 1009 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 NOC3LQ8WTT2 800 aaKnown RBP9.41□□□□□ -0.9
CDKL5-206ENST00000623610 ASB12Q8WXK4 309 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 NRBF2Q96F24 287 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 B3GNT4Q9C0J1 378 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 EHMT1Q9H9B1 1298 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 CD93Q9NPY3 652 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 UBP1Q9NZI7 540 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 AASSQ9UDR5 926 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 GRID1Q9ULK0 1009 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 ATP11BQ9Y2G3 1177 aa9.41□□□□□ -0.9
CDKL5-206ENST00000623610 ZFP37Q9Y6Q3 630 aaPredicted RBP9.41□□□□□ -0.9
CDKL5-206ENST00000623610 MYBBP1AQ9BQG0 1328 aaKnown RBP9.41□□□□□ -0.9
CDKL5-206ENST00000623610 KIAA0232Q92628 1395 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 DOK2O60496 412 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 MAFKO60675 156 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 LARGE1O95461 756 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 GCP02774 474 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 CYP2A6P11509 494 aaPredicted RBP9.4□□□□□ -0.9
CDKL5-206ENST00000623610 DNAJB1P25685 340 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 LIFRP42702 1097 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 ID4P47928 161 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 MTMR2Q13614 643 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 SUZ12Q15022 739 aaKnown RBP9.4□□□□□ -0.9
CDKL5-206ENST00000623610 GEN1Q17RS7 908 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 IFFO2Q5TF58 517 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 WDR73Q6P4I2 378 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 FAM9CQ8IZT9 166 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 CPA6Q8N4T0 437 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 CCDC26Q8TAB7 109 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 RNF139Q8WU17 664 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 CSRNP1Q96S65 589 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 TBCBQ99426 244 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 NAP1L3Q99457 506 aaPredicted RBP9.4□□□□□ -0.9
CDKL5-206ENST00000623610 TRIM56Q9BRZ2 755 aaKnown RBP9.4□□□□□ -0.9
CDKL5-206ENST00000623610 ATP13A1Q9HD20 1204 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 NSMCE4AQ9NXX6 385 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 TBC1D29Q9UFV1 150 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 PTPN22Q9Y2R2 807 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 SLIT2O94813 1529 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 USP19O94966 1318 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 MYOM1P52179 1685 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 PLCH1Q4KWH8 1693 aa9.4□□□□□ -0.9
CDKL5-206ENST00000623610 NINLQ9Y2I6 1382 aa9.4□□□□□ -0.91
CDKL5-206ENST00000623610 DNAJC25-GNG10A0A024R161 153 aa9.4□□□□□ -0.91
CDKL5-206ENST00000623610 HNRNPCL2B2RXH8 293 aa9.4□□□□□ -0.91
CDKL5-206ENST00000623610 HNRNPCL1O60812 293 aaKnown RBP9.4□□□□□ -0.91
CDKL5-206ENST00000623610 IDUAP35475 653 aa9.4□□□□□ -0.91
CDKL5-206ENST00000623610 EPS15P42566 896 aa9.4□□□□□ -0.91
CDKL5-206ENST00000623610 TKTL1P51854 596 aa9.4□□□□□ -0.91
CDKL5-206ENST00000623610 CHRNA2Q15822 529 aa9.4□□□□□ -0.91
CDKL5-206ENST00000623610 RPUSD3Q6P087 351 aaKnown RBP9.4□□□□□ -0.91
CDKL5-206ENST00000623610 PKN3Q6P5Z2 889 aa9.4□□□□□ -0.91
CDKL5-206ENST00000623610 SEPT14Q6ZU15 432 aa9.4□□□□□ -0.91
CDKL5-206ENST00000623610 NME9Q86XW9 330 aa9.4□□□□□ -0.91
CDKL5-206ENST00000623610 MOSPD2Q8NHP6 518 aa9.4□□□□□ -0.91
CDKL5-206ENST00000623610 ZNF296Q8WUU4 475 aaPredicted RBP9.4□□□□□ -0.91
CDKL5-206ENST00000623610 WNT5BQ9H1J7 359 aa9.4□□□□□ -0.91
CDKL5-206ENST00000623610 SUCOQ9UBS9 1254 aaKnown RBP9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms