RNA–Protein interactions for RNA: ENST00000623219.3

LINC00643-205, long intergenic non-protein coding RNA 643, humanhuman

TSL 1 (best)

Gene LINC00643, Length 962 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-205ENST00000623219 SCLT1Q96NL6 688 aa16.6■□□□□ 0.25
LINC00643-205ENST00000623219 ADAM2Q99965 735 aa16.6■□□□□ 0.25
LINC00643-205ENST00000623219 SH2D3AQ9BRG2 576 aa16.6■□□□□ 0.25
LINC00643-205ENST00000623219 FOXP1Q9H334 677 aaPredicted RBP16.6■□□□□ 0.25
LINC00643-205ENST00000623219 CYP26B1Q9NR63 512 aa16.6■□□□□ 0.25
LINC00643-205ENST00000623219 WRAP73Q9P2S5 460 aaPredicted RBP16.6■□□□□ 0.25
LINC00643-205ENST00000623219 MYO7AQ13402 2215 aa16.6■□□□□ 0.25
LINC00643-205ENST00000623219 C9IYK1 514 aa16.59■□□□□ 0.25
LINC00643-205ENST00000623219 WNT7AO00755 349 aa16.59■□□□□ 0.25
LINC00643-205ENST00000623219 MAFO75444 373 aaPredicted RBP16.59■□□□□ 0.25
LINC00643-205ENST00000623219 DARSP14868 501 aaKnown RBP16.59■□□□□ 0.25
LINC00643-205ENST00000623219 GUCY1B3Q02153 619 aa16.59■□□□□ 0.25
LINC00643-205ENST00000623219 ORC2Q13416 577 aaPredicted RBP16.59■□□□□ 0.25
LINC00643-205ENST00000623219 DRP2Q13474 957 aa16.59■□□□□ 0.25
LINC00643-205ENST00000623219 GPM6BQ13491 265 aa16.59■□□□□ 0.25
LINC00643-205ENST00000623219 SKIV2LQ15477 1246 aaKnown RBP16.59■□□□□ 0.25
LINC00643-205ENST00000623219 PTPROQ16827 1216 aa16.59■□□□□ 0.25
LINC00643-205ENST00000623219 EXOC8Q8IYI6 725 aa16.59■□□□□ 0.25
LINC00643-205ENST00000623219 FBXO18Q8NFZ0 1043 aa16.59■□□□□ 0.25
LINC00643-205ENST00000623219 NLRP7Q8WX94 980 aa16.59■□□□□ 0.25
LINC00643-205ENST00000623219 SLC7A3Q8WY07 619 aa16.59■□□□□ 0.25
LINC00643-205ENST00000623219 MRPL38Q96DV4 380 aaKnown RBP16.59■□□□□ 0.25
LINC00643-205ENST00000623219 C11orf84Q9BUA3 381 aaPredicted RBP16.59■□□□□ 0.25
LINC00643-205ENST00000623219 PCDHA12Q9UN75 941 aa16.59■□□□□ 0.25
LINC00643-205ENST00000623219 GAS2O43903 313 aaKnown RBP16.58■□□□□ 0.24
LINC00643-205ENST00000623219 RB1P06400 928 aa16.58■□□□□ 0.24
LINC00643-205ENST00000623219 YWHABP31946 246 aaKnown RBP16.58■□□□□ 0.24
LINC00643-205ENST00000623219 RFC5P40937 340 aa16.58■□□□□ 0.24
LINC00643-205ENST00000623219 MRPS5P82675 430 aaKnown RBP16.58■□□□□ 0.24
LINC00643-205ENST00000623219 DSC3Q14574 896 aa16.58■□□□□ 0.24
LINC00643-205ENST00000623219 TIGD5Q53EQ6 642 aa16.58■□□□□ 0.24
LINC00643-205ENST00000623219 ZNF410Q86VK4 478 aa16.58■□□□□ 0.24
LINC00643-205ENST00000623219 DYDC2Q96IM9 177 aa16.58■□□□□ 0.24
LINC00643-205ENST00000623219 CEP170P1Q96L14 293 aa16.58■□□□□ 0.24
LINC00643-205ENST00000623219 ASB2Q96Q27 587 aa16.58■□□□□ 0.24
LINC00643-205ENST00000623219 MTMR9Q96QG7 549 aa16.58■□□□□ 0.24
LINC00643-205ENST00000623219 PLVAPQ9BX97 442 aa16.58■□□□□ 0.24
LINC00643-205ENST00000623219 ZSWIM4Q9H7M6 989 aa16.58■□□□□ 0.24
LINC00643-205ENST00000623219 TTC12Q9H892 705 aaPredicted RBP16.58■□□□□ 0.24
LINC00643-205ENST00000623219 COG5Q9UP83 839 aa16.58■□□□□ 0.24
LINC00643-205ENST00000623219 PCDHB7Q9Y5E2 793 aa16.58■□□□□ 0.24
LINC00643-205ENST00000623219 NCOR1O75376 2440 aa16.58■□□□□ 0.24
LINC00643-205ENST00000623219 BMPR1AP36894 532 aa16.57■□□□□ 0.24
LINC00643-205ENST00000623219 POLGP54098 1239 aaPredicted RBP16.57■□□□□ 0.24
LINC00643-205ENST00000623219 NPEPPSP55786 919 aa16.57■□□□□ 0.24
LINC00643-205ENST00000623219 CYP4A11Q02928 519 aa16.57■□□□□ 0.24
LINC00643-205ENST00000623219 GNL2Q13823 731 aaKnown RBP16.57■□□□□ 0.24
LINC00643-205ENST00000623219 AAK1Q2M2I8 961 aa16.57■□□□□ 0.24
LINC00643-205ENST00000623219 OTUD6AQ7L8S5 288 aa16.57■□□□□ 0.24
LINC00643-205ENST00000623219 ZNF668Q96K58 619 aaPredicted RBP16.57■□□□□ 0.24
LINC00643-205ENST00000623219 EIF2AK1Q9BQI3 630 aaKnown RBP16.57■□□□□ 0.24
LINC00643-205ENST00000623219 GCOM2Q9BZD3 368 aaPredicted RBP16.57■□□□□ 0.24
LINC00643-205ENST00000623219 LMAN2LQ9H0V9 348 aa16.57■□□□□ 0.24
LINC00643-205ENST00000623219 DHX33Q9H6R0 707 aaKnown RBP16.57■□□□□ 0.24
LINC00643-205ENST00000623219 ELAC1Q9H777 363 aaKnown RBP16.57■□□□□ 0.24
LINC00643-205ENST00000623219 TMEM161AQ9NX61 479 aa16.57■□□□□ 0.24
LINC00643-205ENST00000623219 RGL1Q9NZL6 768 aa16.57■□□□□ 0.24
LINC00643-205ENST00000623219 SUCLA2Q9P2R7 463 aaPredicted RBP16.57■□□□□ 0.24
LINC00643-205ENST00000623219 MRPL42Q9Y6G3 142 aaKnown RBP16.57■□□□□ 0.24
LINC00643-205ENST00000623219 ZSCAN20P17040 1043 aaPredicted RBP16.56■□□□□ 0.24
LINC00643-205ENST00000623219 SFPQP23246 707 aaKnown RBP eCLIP16.56■□□□□ 0.24
LINC00643-205ENST00000623219 MCM7P33993 719 aa16.56■□□□□ 0.24
LINC00643-205ENST00000623219 TXKP42681 527 aa16.56■□□□□ 0.24
LINC00643-205ENST00000623219 CTTNQ14247 550 aaKnown RBP16.56■□□□□ 0.24
LINC00643-205ENST00000623219 PAN2Q504Q3 1202 aaKnown RBP16.56■□□□□ 0.24
LINC00643-205ENST00000623219 RHPN2Q8IUC4 686 aa16.56■□□□□ 0.24
LINC00643-205ENST00000623219 NOSTRINQ8IVI9 506 aa16.56■□□□□ 0.24
LINC00643-205ENST00000623219 P2RX5Q93086 422 aa16.56■□□□□ 0.24
LINC00643-205ENST00000623219 TBC1D32Q96NH3 1257 aa16.56■□□□□ 0.24
LINC00643-205ENST00000623219 INO80BQ9C086 356 aaPredicted RBP16.56■□□□□ 0.24
LINC00643-205ENST00000623219 KIF3AQ9Y496 699 aa16.56■□□□□ 0.24
LINC00643-205ENST00000623219 C5orf42Q9H799 3197 aa16.56■□□□□ 0.24
LINC00643-205ENST00000623219 TTC28Q96AY4 2481 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 A0A087WZ62 844 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 POTEMA6NI47 508 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 HOXA2O43364 376 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 SLITRK3O94933 977 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 LYPLA2O95372 231 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 IBSPP21815 317 aaPredicted RBP16.55■□□□□ 0.24
LINC00643-205ENST00000623219 TRAPPC10P48553 1259 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 GATMP50440 423 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 FAM189BP81408 668 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 EMC2Q15006 297 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 NAALADL2Q58DX5 795 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 TPH2Q8IWU9 490 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 PSPC1Q8WXF1 523 aaKnown RBP16.55■□□□□ 0.24
LINC00643-205ENST00000623219 HLA-CQ95604 372 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 NLRP4Q96MN2 994 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 FDXACB1Q9BRP7 624 aaPredicted RBP16.55■□□□□ 0.24
LINC00643-205ENST00000623219 TMEM60Q9H2L4 133 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 ATP6V0A4Q9HBG4 840 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 DACT1Q9NYF0 836 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 COL4A3BPQ9Y5P4 624 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 BDP1A6H8Y1 2624 aa16.55■□□□□ 0.24
LINC00643-205ENST00000623219 OR52Z1P0C646 297 aa16.54■□□□□ 0.24
LINC00643-205ENST00000623219 ATP2B1P20020 1258 aa16.54■□□□□ 0.24
LINC00643-205ENST00000623219 MCM2P49736 904 aa16.54■□□□□ 0.24
LINC00643-205ENST00000623219 TFF2Q03403 129 aa16.54■□□□□ 0.24
LINC00643-205ENST00000623219 XKR9Q5GH70 373 aa16.54■□□□□ 0.24
LINC00643-205ENST00000623219 TTC38Q5R3I4 469 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms