RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 SNX29Q8TEQ0 813 aa15.58■□□□□ 0.08
PCDHGC3-208ENST00000622836 TCP11Q8WWU5 503 aa15.58■□□□□ 0.08
PCDHGC3-208ENST00000622836 PSPC1Q8WXF1 523 aaKnown RBP15.58■□□□□ 0.08
PCDHGC3-208ENST00000622836 MYLIPQ8WY64 445 aa15.58■□□□□ 0.08
PCDHGC3-208ENST00000622836 TOP1MTQ969P6 601 aa15.58■□□□□ 0.08
PCDHGC3-208ENST00000622836 TMEM143Q96AN5 459 aa15.58■□□□□ 0.08
PCDHGC3-208ENST00000622836 NLRP4Q96MN2 994 aa15.58■□□□□ 0.08
PCDHGC3-208ENST00000622836 GUCD1Q96NT3 240 aa15.58■□□□□ 0.08
PCDHGC3-208ENST00000622836 NACC1Q96RE7 527 aa15.58■□□□□ 0.08
PCDHGC3-208ENST00000622836 CDX2Q99626 313 aaPredicted RBP15.58■□□□□ 0.08
PCDHGC3-208ENST00000622836 DHX33Q9H6R0 707 aaKnown RBP15.58■□□□□ 0.08
PCDHGC3-208ENST00000622836 CERS4Q9HA82 394 aa15.58■□□□□ 0.08
PCDHGC3-208ENST00000622836 ATP6V0A4Q9HBG4 840 aa15.58■□□□□ 0.08
PCDHGC3-208ENST00000622836 ERVK-5Q9HDB9 667 aa15.58■□□□□ 0.08
PCDHGC3-208ENST00000622836 A0A087WZ62 844 aa15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 USO1O60763 962 aaKnown RBP15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 DGAT1O75907 488 aa15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 SPATA31C1P0DKV0 1188 aa15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 DARSP14868 501 aaKnown RBP15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 ZSCAN20P17040 1043 aaPredicted RBP15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 RARRES1P49788 294 aa15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 ATP2C1P98194 919 aaPredicted RBP15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 PDIA5Q14554 519 aa15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 KRT79Q5XKE5 535 aa15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 ZNF410Q86VK4 478 aa15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 GAS2L1Q99501 681 aaPredicted RBP15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 FDXACB1Q9BRP7 624 aaPredicted RBP15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 INO80BQ9C086 356 aaPredicted RBP15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 PRDM12Q9H4Q4 367 aa15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 LRFN2Q9ULH4 789 aa15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 COL4A3BPQ9Y5P4 624 aa15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 MYO9BQ13459 2157 aa15.57■□□□□ 0.08
PCDHGC3-208ENST00000622836 PTPRSQ13332 1948 aa15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 LCHNA4D1U4 455 aa15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 ARHGEF35A5YM69 484 aa15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 VWA3AA6NCI4 1184 aa15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 STX6O43752 255 aa15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 BMP15O95972 392 aa15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 STAG3L1P0CL83 205 aa15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 SRGAP2CP0DJJ0 459 aa15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 XRCC6P12956 609 aaKnown RBP eCLIP15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 FOSL2P15408 326 aa15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 SFPQP23246 707 aaKnown RBP eCLIP15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 ZRSR1Q15695 479 aaKnown RBP15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 KSR1Q8IVT5 923 aa15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 IGSF22Q8N9C0 903 aa15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 SPRYD3Q8NCJ5 442 aa15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 PRPF31Q8WWY3 499 aaKnown RBP15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 ARNTL2Q8WYA1 636 aa15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 ADAM2Q99965 735 aa15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 TSPYL2Q9H2G4 693 aaPredicted RBP15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 TMX1Q9H3N1 280 aa15.56■□□□□ 0.08
PCDHGC3-208ENST00000622836 CSDE1O75534 798 aaKnown RBP15.55■□□□□ 0.08
PCDHGC3-208ENST00000622836 MUTP22033 750 aa15.55■□□□□ 0.08
PCDHGC3-208ENST00000622836 FGFR4P22455 802 aa15.55■□□□□ 0.08
PCDHGC3-208ENST00000622836 TAP1Q03518 808 aa15.55■□□□□ 0.08
PCDHGC3-208ENST00000622836 LAMTOR4Q0VGL1 99 aa15.55■□□□□ 0.08
PCDHGC3-208ENST00000622836 ARL6IP4Q66PJ3 421 aaKnown RBP15.55■□□□□ 0.08
PCDHGC3-208ENST00000622836 FAM43BQ6ZT52 329 aaPredicted RBP15.55■□□□□ 0.08
PCDHGC3-208ENST00000622836 RTN4RL1Q86UN2 441 aaPredicted RBP15.55■□□□□ 0.08
PCDHGC3-208ENST00000622836 NPAS4Q8IUM7 802 aa15.55■□□□□ 0.08
PCDHGC3-208ENST00000622836 LINC01599Q8WXQ3 324 aa15.55■□□□□ 0.08
PCDHGC3-208ENST00000622836 C1orf112Q9NSG2 853 aa15.55■□□□□ 0.08
PCDHGC3-208ENST00000622836 DDX19AQ9NUU7 478 aaKnown RBP15.55■□□□□ 0.08
PCDHGC3-208ENST00000622836 RNF216Q9NWF9 866 aaPredicted RBP15.55■□□□□ 0.08
PCDHGC3-208ENST00000622836 DBR1Q9UK59 544 aaKnown RBP15.55■□□□□ 0.08
PCDHGC3-208ENST00000622836 MTUS1Q9ULD2 1270 aa15.55■□□□□ 0.08
PCDHGC3-208ENST00000622836 KIAA1024Q9UPX6 916 aa15.55■□□□□ 0.08
PCDHGC3-208ENST00000622836 STXBP5LQ9Y2K9 1186 aa15.55■□□□□ 0.08
PCDHGC3-208ENST00000622836 PP2D1A8MPX8 630 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 ASAP2O43150 1006 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 MGEA5O60502 916 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 ARHGEF15O94989 841 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 IGFBP4P22692 258 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 CDC25AP30304 524 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 SARSP49591 514 aaKnown RBP15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 HTRA4P83105 476 aaPredicted RBP15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 TFDP1Q14186 410 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 MXD4Q14582 209 aaPredicted RBP15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 SF3A1Q15459 793 aaKnown RBP15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 IL17AQ16552 155 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 SLC24A5Q71RS6 500 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 MAEAQ7L5Y9 396 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 CATSPER4Q7RTX7 472 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 RNF149Q8NC42 400 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 CDK5RAP3Q96JB5 506 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 RGS18Q9NS28 235 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 MTMR6Q9Y217 621 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 PCDHB7Q9Y5E2 793 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 ARID2Q68CP9 1835 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 CHD9Q3L8U1 2897 aa15.54■□□□□ 0.08
PCDHGC3-208ENST00000622836 LINC01553A4QN01 128 aa15.53■□□□□ 0.08
PCDHGC3-208ENST00000622836 PHKA2P46019 1235 aa15.53■□□□□ 0.08
PCDHGC3-208ENST00000622836 RESTQ13127 1097 aa15.53■□□□□ 0.08
PCDHGC3-208ENST00000622836 FAM102BQ5T8I3 360 aa15.53■□□□□ 0.08
PCDHGC3-208ENST00000622836 PADI6Q6TGC4 694 aa15.53■□□□□ 0.08
PCDHGC3-208ENST00000622836 MCPH1Q8NEM0 835 aa15.53■□□□□ 0.08
PCDHGC3-208ENST00000622836 TGS1Q96RS0 853 aaKnown RBP15.53■□□□□ 0.08
PCDHGC3-208ENST00000622836 POLR3FQ9H1D9 316 aaPredicted RBP15.53■□□□□ 0.08
PCDHGC3-208ENST00000622836 ZSCAN16Q9H4T2 348 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms