RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 HOOK1Q9UJC3 728 aaKnown RBP22.02■■□□□ 1.12
PDLIM2-221ENST00000622702 TUBE1Q9UJT0 475 aa22.02■■□□□ 1.12
PDLIM2-221ENST00000622702 GTPBP6O43824 516 aaPredicted RBP22.01■■□□□ 1.11
PDLIM2-221ENST00000622702 ZNF200P98182 395 aaPredicted RBP22.01■■□□□ 1.11
PDLIM2-221ENST00000622702 POSTNQ15063 836 aa22.01■■□□□ 1.11
PDLIM2-221ENST00000622702 CHRDL2Q6WN34 429 aa22.01■■□□□ 1.11
PDLIM2-221ENST00000622702 DDX12PQ92771 950 aa22.01■■□□□ 1.11
PDLIM2-221ENST00000622702 DNAJC19Q96DA6 116 aa22.01■■□□□ 1.11
PDLIM2-221ENST00000622702 HIPK3Q9H422 1215 aa22.01■■□□□ 1.11
PDLIM2-221ENST00000622702 TRIP12Q14669 1992 aaPredicted RBP22■■□□□ 1.11
PDLIM2-221ENST00000622702 LINC01465Q8N7H1 131 aa22■■□□□ 1.11
PDLIM2-221ENST00000622702 RETREG2Q8NC44 543 aa22■■□□□ 1.11
PDLIM2-221ENST00000622702 CTAGE1Q96RT6 745 aa22■■□□□ 1.11
PDLIM2-221ENST00000622702 GDF15Q99988 308 aa22■■□□□ 1.11
PDLIM2-221ENST00000622702 NOC4LQ9BVI4 516 aaKnown RBP22■■□□□ 1.11
PDLIM2-221ENST00000622702 NUP62CLQ9H1M0 184 aa22■■□□□ 1.11
PDLIM2-221ENST00000622702 ODF2LQ9ULJ1 636 aa22■■□□□ 1.11
PDLIM2-221ENST00000622702 PCDHA2Q9Y5H9 948 aa22■■□□□ 1.11
PDLIM2-221ENST00000622702 TRAK2O60296 914 aa21.99■■□□□ 1.11
PDLIM2-221ENST00000622702 CYP2C18P33260 490 aa21.99■■□□□ 1.11
PDLIM2-221ENST00000622702 CUL4BQ13620 913 aa21.99■■□□□ 1.11
PDLIM2-221ENST00000622702 GIT2Q14161 759 aa21.99■■□□□ 1.11
PDLIM2-221ENST00000622702 REEP2Q9BRK0 252 aa21.99■■□□□ 1.11
PDLIM2-221ENST00000622702 UMODL1Q5DID0 1318 aa21.98■■□□□ 1.11
PDLIM2-221ENST00000622702 NPHP3-ACAD11A0A0J9YXS1 232 aa21.98■■□□□ 1.11
PDLIM2-221ENST00000622702 TREHO43280 583 aa21.98■■□□□ 1.11
PDLIM2-221ENST00000622702 KRT18P05783 430 aaKnown RBP21.98■■□□□ 1.11
PDLIM2-221ENST00000622702 PRR29P0C7W0 189 aa21.98■■□□□ 1.11
PDLIM2-221ENST00000622702 DPYDQ12882 1025 aa21.98■■□□□ 1.11
PDLIM2-221ENST00000622702 MAPK7Q13164 816 aa21.98■■□□□ 1.11
PDLIM2-221ENST00000622702 EFCAB12Q6NXP0 572 aa21.98■■□□□ 1.11
PDLIM2-221ENST00000622702 DYMQ7RTS9 669 aa21.98■■□□□ 1.11
PDLIM2-221ENST00000622702 DAW1Q8N136 415 aa21.98■■□□□ 1.11
PDLIM2-221ENST00000622702 TCP11Q8WWU5 503 aa21.98■■□□□ 1.11
PDLIM2-221ENST00000622702 ZBTB10Q96DT7 871 aa21.98■■□□□ 1.11
PDLIM2-221ENST00000622702 BLZF1Q9H2G9 400 aa21.98■■□□□ 1.11
PDLIM2-221ENST00000622702 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.97■■□□□ 1.11
PDLIM2-221ENST00000622702 SMIM35A0A1B0GVV1 85 aa21.97■■□□□ 1.11
PDLIM2-221ENST00000622702 HIP1RO75146 1068 aa21.97■■□□□ 1.11
PDLIM2-221ENST00000622702 CASP1P29466 404 aa21.97■■□□□ 1.11
PDLIM2-221ENST00000622702 MKRN4PQ13434 485 aaPredicted RBP21.97■■□□□ 1.11
PDLIM2-221ENST00000622702 PNOCQ13519 176 aa21.97■■□□□ 1.11
PDLIM2-221ENST00000622702 IER5Q5VY09 327 aa21.97■■□□□ 1.11
PDLIM2-221ENST00000622702 MFSD5Q6N075 450 aa21.97■■□□□ 1.11
PDLIM2-221ENST00000622702 TAF2Q6P1X5 1199 aa21.97■■□□□ 1.11
PDLIM2-221ENST00000622702 LRRC71Q8N4P6 559 aa21.97■■□□□ 1.11
PDLIM2-221ENST00000622702 KIFAP3Q92845 792 aa21.97■■□□□ 1.11
PDLIM2-221ENST00000622702 DRC1Q96MC2 740 aa21.97■■□□□ 1.11
PDLIM2-221ENST00000622702 SUGCTQ9HAC7 445 aa21.97■■□□□ 1.11
PDLIM2-221ENST00000622702 COLQQ9Y215 455 aaPredicted RBP21.97■■□□□ 1.11
PDLIM2-221ENST00000622702 EVPLQ92817 2033 aa21.97■■□□□ 1.11
PDLIM2-221ENST00000622702 FRMD3A2A2Y4 597 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 TMOD1P28289 359 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 ARL2P36404 184 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 DNM2P50570 870 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 ZNF131P52739 623 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 CCL23P55773 120 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 ASIC1P78348 528 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 RAD51AP2Q09MP3 1159 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 PTK7Q13308 1070 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 CAMK4Q16566 473 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 CCDC183Q5T5S1 534 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 FAM102BQ5T8I3 360 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 MAEAQ7L5Y9 396 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 SERINC5Q86VE9 423 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 METTL13Q8N6R0 699 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 SPATA20Q8TB22 786 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 SYAP1Q96A49 352 aaPredicted RBP21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 UBE2OQ9C0C9 1292 aaKnown RBP21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 GPRC5CQ9NQ84 441 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 TMEM63CQ9P1W3 806 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 PVALEFA0A1B0GWK0 134 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 CLCN3P51790 818 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 CACNB1Q02641 598 aaPredicted RBP21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 FPGSQ05932 587 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 DRP2Q13474 957 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 BFSP2Q13515 415 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 UNC13DQ70J99 1090 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 KIAA0319LQ8IZA0 1049 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 TMEM199Q8N511 208 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 CCDC155Q8N6L0 562 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 DHX38Q92620 1227 aaKnown RBP21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 TMEM143Q96AN5 459 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 C17orf75Q9HAS0 396 aa21.96■■□□□ 1.11
PDLIM2-221ENST00000622702 RSPH10B2B2RC85 870 aa21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 KLRC4O43908 158 aa21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 TBCAO75347 108 aaKnown RBP21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 SMC2O95347 1197 aa21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 RPLP2P05387 115 aaKnown RBP21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 RSPH10BP0C881 870 aa21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 BMP8BP34820 402 aa21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 CAVIN1Q6NZI2 390 aaKnown RBP21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 RUFY4Q6ZNE9 571 aa21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 RPAINQ86UA6 219 aa21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 CCDC65Q8IXS2 484 aa21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 CAGE1Q8TC20 777 aa21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 PSPC1Q8WXF1 523 aaKnown RBP21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 WNT8BQ93098 351 aa21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 POLR3FQ9H1D9 316 aaPredicted RBP21.95■■□□□ 1.1
PDLIM2-221ENST00000622702 WNT8AQ9H1J5 351 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms