RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 STXBP5LQ9Y2K9 1186 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 FRMD4BQ9Y2L6 1034 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 BHMG1C9JSJ3 638 aaPredicted RBP10.28□□□□□ -0.76
PDPN-212ENST00000621990 HIP1RO75146 1068 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 PHACTR2O75167 634 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 KCNA3P22001 575 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 ALCAMQ13740 583 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 RPS6KA1Q15418 735 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 ENOX2Q16206 610 aaKnown RBP10.28□□□□□ -0.76
PDPN-212ENST00000621990 CBWD6Q4V339 395 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 CBWD3Q5JTY5 395 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 CBWD5Q5RIA9 395 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 SAMD3Q8N6K7 520 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 AFAP1L1Q8TED9 768 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 SCFD2Q8WU76 684 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.28□□□□□ -0.76
PDPN-212ENST00000621990 CALR3Q96L12 384 aaKnown RBP10.28□□□□□ -0.76
PDPN-212ENST00000621990 KCNH7Q9NS40 1196 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 MAP3K20Q9NYL2 800 aaKnown RBP10.28□□□□□ -0.76
PDPN-212ENST00000621990 COL20A1Q9P218 1284 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 PACSIN2Q9UNF0 486 aaPredicted RBP10.28□□□□□ -0.76
PDPN-212ENST00000621990 ZBTB12Q9Y330 459 aaPredicted RBP10.28□□□□□ -0.76
PDPN-212ENST00000621990 NCANO14594 1321 aa10.28□□□□□ -0.76
PDPN-212ENST00000621990 EVI5O60447 810 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 SHOX2O60902 331 aaPredicted RBP10.27□□□□□ -0.76
PDPN-212ENST00000621990 H2AFZP0C0S5 128 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 CAPN2P17655 700 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 INPP5BP32019 993 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 PCNX4Q63HM2 1172 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 H2AFVQ71UI9 128 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 MIGA2Q7L4E1 593 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 KSR1Q8IVT5 923 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 LMO3Q8TAP4 145 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 RIN2Q8WYP3 895 aaPredicted RBP10.27□□□□□ -0.76
PDPN-212ENST00000621990 LPAR1Q92633 364 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 AGBL1Q96MI9 1066 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 ST6GALNAC4Q9H4F1 302 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 ZNF277Q9NRM2 450 aaPredicted RBP10.27□□□□□ -0.76
PDPN-212ENST00000621990 STK32BQ9NY57 414 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 SUCLA2Q9P2R7 463 aaPredicted RBP10.27□□□□□ -0.76
PDPN-212ENST00000621990 APEX2Q9UBZ4 518 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 CCPG1Q9ULG6 757 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 ZNRF3Q9ULT6 936 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 UBIAD1Q9Y5Z9 338 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 PARP14Q460N5 1801 aa10.27□□□□□ -0.76
PDPN-212ENST00000621990 ARHGEF35A5YM69 484 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 P4HBP07237 508 aaKnown RBP10.27□□□□□ -0.77
PDPN-212ENST00000621990 LMNB1P20700 586 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 BFSP1Q12934 665 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 SF3B2Q13435 895 aaKnown RBP10.27□□□□□ -0.77
PDPN-212ENST00000621990 ZYXQ15942 572 aaKnown RBP10.27□□□□□ -0.77
PDPN-212ENST00000621990 PADI6Q6TGC4 694 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 MCF2L2Q86YR7 1114 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 RASGEF1CQ8N431 466 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 PRPF38AQ8NAV1 312 aaKnown RBP10.27□□□□□ -0.77
PDPN-212ENST00000621990 BANK1Q8NDB2 785 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 LNX1Q8TBB1 728 aaPredicted RBP10.27□□□□□ -0.77
PDPN-212ENST00000621990 LMBR1Q8WVP7 490 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 INTS2Q9H0H0 1204 aaKnown RBP10.27□□□□□ -0.77
PDPN-212ENST00000621990 VEZTQ9HBM0 779 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 AGO4Q9HCK5 861 aaKnown RBP10.27□□□□□ -0.77
PDPN-212ENST00000621990 WDR46O15213 610 aaKnown RBP10.27□□□□□ -0.77
PDPN-212ENST00000621990 HEXIM1O94992 359 aaKnown RBP10.27□□□□□ -0.77
PDPN-212ENST00000621990 TNNC1P63316 161 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 MRPS25P82663 173 aaKnown RBP10.27□□□□□ -0.77
PDPN-212ENST00000621990 PAK2Q13177 524 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 ITGB3BPQ13352 177 aaPredicted RBP10.27□□□□□ -0.77
PDPN-212ENST00000621990 KIF22Q14807 665 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 SYCE1Q8N0S2 351 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 TSEN2Q8NCE0 465 aaKnown RBP10.27□□□□□ -0.77
PDPN-212ENST00000621990 TAF4BQ92750 862 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 HES6Q96HZ4 224 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 TMEM206Q9H813 350 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 DNAJC12Q9UKB3 198 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 USP20Q9Y2K6 914 aa10.27□□□□□ -0.77
PDPN-212ENST00000621990 GOLGA8KD6RF30 607 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 NFIBO00712 420 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 WNT10BO00744 389 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 KCNK3O14649 394 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 MAPK13O15264 365 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 PMM2O15305 246 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 TMEM253P0C7T8 217 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 RARRES1P49788 294 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 CYP2J2P51589 502 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 SNRPFP62306 86 aaKnown RBP10.26□□□□□ -0.77
PDPN-212ENST00000621990 MYL7Q01449 175 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 DRAP1Q14919 205 aaPredicted RBP10.26□□□□□ -0.77
PDPN-212ENST00000621990 TKFCQ3LXA3 575 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 NT5DC3Q86UY8 548 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 IL31RAQ8NI17 732 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 KRT12Q99456 494 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 HINFPQ9BQA5 517 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 TIPINQ9BVW5 301 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 KIAA1683Q9H0B3 1180 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 SLC38A10Q9HBR0 1119 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 GINM1Q9NU53 330 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 TTC7AQ9ULT0 858 aaPredicted RBP10.26□□□□□ -0.77
PDPN-212ENST00000621990 ZHX2Q9Y6X8 837 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 P4HA2O15460 535 aa10.26□□□□□ -0.77
PDPN-212ENST00000621990 IVLP07476 585 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms