RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 LARSQ9P2J5 1176 aaKnown RBP20.52■□□□□ 0.88
SEMA6C-210ENST00000621728 SLC16A4O15374 487 aa20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 HOXD8P13378 290 aaPredicted RBP20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 CDK11BP21127 795 aaKnown RBP20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 CNGA1P29973 690 aa20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 PTPN21Q16825 1174 aa20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 MCPH1Q8NEM0 835 aa20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 ZNF507Q8TCN5 953 aa20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 NAP1L5Q96NT1 182 aaPredicted RBP20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 XPO4Q9C0E2 1151 aaKnown RBP20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 BICDL2A1A5D9 508 aa20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 A6NJR5 290 aa20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 FKTNO75072 461 aa20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 AKR1A1P14550 325 aa20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 CCND3P30281 292 aaPredicted RBP20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 CHMP4BP1P59074 171 aa20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 IGBP1P78318 339 aa20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 DGKDQ16760 1214 aa20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 CREBRFQ8IUR6 639 aa20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 ASAP3Q8TDY4 903 aa20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 STRA6Q9BX79 667 aa20.51■□□□□ 0.87
SEMA6C-210ENST00000621728 MYADML2A6NDP7 307 aa20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 CCDC169A6NNP5 214 aa20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 GOLGA6L6A8MZA4 724 aa20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 H3BRB1 525 aa20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 ADCY3O60266 1144 aa20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 PPP1R37O75864 691 aa20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 SERPINC1P01008 464 aa20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 NPTX2P47972 431 aa20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 SLC26A2P50443 739 aa20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 TBC1D8BQ0IIM8 1120 aa20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 KNOP1Q1ED39 458 aaKnown RBP20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 BMT2Q1RMZ1 405 aa20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 LRRC71Q8N4P6 559 aa20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 SLC7A3Q8WY07 619 aa20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 KIFAP3Q92845 792 aa20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 TUT1Q9H6E5 874 aaKnown RBP20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 SAGE1Q9NXZ1 904 aa20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 ADGRA3Q8IWK6 1321 aa20.5■□□□□ 0.87
SEMA6C-210ENST00000621728 HBP1O60381 514 aa20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 MAFO75444 373 aaPredicted RBP20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 PRKAR2AP13861 404 aaKnown RBP20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 INSRRP14616 1297 aa20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 HSPA6P17066 643 aa20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 RFC5P40937 340 aa20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 MKRN4PQ13434 485 aaPredicted RBP20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 APTXQ7Z2E3 356 aaKnown RBP20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 AP5M1Q9H0R1 490 aa20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 EVPLQ92817 2033 aa20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 KCNJ18B7U540 433 aa20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 EIF3DO15371 548 aaKnown RBP eCLIP20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 NCKAP1LP55160 1127 aa20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 KCNJ12Q14500 433 aa20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 LRRC55Q6ZSA7 311 aa20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 HAUS6Q7Z4H7 955 aa20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 ERO1AQ96HE7 468 aa20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 SUGCTQ9HAC7 445 aa20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 INTS13Q9NVM9 706 aa20.49■□□□□ 0.87
SEMA6C-210ENST00000621728 TGFB1I1O43294 461 aa20.48■□□□□ 0.87
SEMA6C-210ENST00000621728 TPM2P07951 284 aa20.48■□□□□ 0.87
SEMA6C-210ENST00000621728 GLRA2P23416 452 aa20.48■□□□□ 0.87
SEMA6C-210ENST00000621728 HOXD10P28358 340 aa20.48■□□□□ 0.87
SEMA6C-210ENST00000621728 ARL2P36404 184 aa20.48■□□□□ 0.87
SEMA6C-210ENST00000621728 LRRC63Q05C16 580 aa20.48■□□□□ 0.87
SEMA6C-210ENST00000621728 SPC24Q8NBT2 197 aa20.48■□□□□ 0.87
SEMA6C-210ENST00000621728 RAET1EQ8TD07 263 aa20.48■□□□□ 0.87
SEMA6C-210ENST00000621728 KAT2BQ92831 832 aa20.48■□□□□ 0.87
SEMA6C-210ENST00000621728 TSG101Q99816 390 aa20.48■□□□□ 0.87
SEMA6C-210ENST00000621728 PGK1P00558 417 aa20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 MYL3P08590 195 aa20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 UBASH3AP57075 661 aa20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 DMP1Q13316 513 aaPredicted RBP20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 KRT31Q15323 416 aa20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 TCP11X2Q5H9J9 407 aa20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 TMEM161BQ8NDZ6 487 aa20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 THAP9Q9H5L6 903 aa20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 KMT5AQ9NQR1 393 aa20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 TAB2Q9NYJ8 693 aa20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 NRBP1Q9UHY1 535 aa20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 ZNF215Q9UL58 517 aaPredicted RBP20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 TISP43B9A030 160 aa20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 CLIC2O15247 247 aa20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 DUSP11O75319 330 aaKnown RBP20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 KIF20AO95235 890 aa20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 GJB1P08034 283 aa20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 FSCN1Q16658 493 aaKnown RBP20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 PCDHB13Q9Y5F0 798 aa20.47■□□□□ 0.87
SEMA6C-210ENST00000621728 C22orf31O95567 290 aa20.46■□□□□ 0.87
SEMA6C-210ENST00000621728 C6orf222P0C671 652 aaPredicted RBP20.46■□□□□ 0.87
SEMA6C-210ENST00000621728 MAPTP10636 758 aaKnown RBP20.46■□□□□ 0.87
SEMA6C-210ENST00000621728 CLCN3P51790 818 aa20.46■□□□□ 0.87
SEMA6C-210ENST00000621728 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.46■□□□□ 0.87
SEMA6C-210ENST00000621728 ZNF668Q96K58 619 aaPredicted RBP20.46■□□□□ 0.87
SEMA6C-210ENST00000621728 CNOT6LQ96LI5 555 aaKnown RBP20.46■□□□□ 0.87
SEMA6C-210ENST00000621728 Q9Y3F1 56 aa20.46■□□□□ 0.87
SEMA6C-210ENST00000621728 IGKV6-21A0A0C4DH24 114 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 SEPT4O43236 478 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 F2P00734 622 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 CPT1AP50416 773 aa20.45■□□□□ 0.86
SEMA6C-210ENST00000621728 RTP1P59025 263 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms