RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 PSRC1Q6PGN9 363 aaPredicted RBP15.94■□□□□ 0.14
CBWD3-217ENST00000621474 SHC4Q6S5L8 630 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 PADI6Q6TGC4 694 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 OTOP2Q7RTS6 562 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 RPUSD2Q8IZ73 545 aaKnown RBP15.94■□□□□ 0.14
CBWD3-217ENST00000621474 DBF4BQ8NFT6 615 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 KCNG4Q8TDN1 519 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 LEO1Q8WVC0 666 aaPredicted RBP15.94■□□□□ 0.14
CBWD3-217ENST00000621474 MAP7D2Q96T17 732 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 ATP6V0A4Q9HBG4 840 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 GPRC5CQ9NQ84 441 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 SUCLA2Q9P2R7 463 aaPredicted RBP15.94■□□□□ 0.14
CBWD3-217ENST00000621474 GINS2Q9Y248 185 aa15.94■□□□□ 0.14
CBWD3-217ENST00000621474 SLC26A4O43511 780 aa15.93■□□□□ 0.14
CBWD3-217ENST00000621474 GAS2O43903 313 aaKnown RBP15.93■□□□□ 0.14
CBWD3-217ENST00000621474 SLC12A3P55017 1021 aa15.93■□□□□ 0.14
CBWD3-217ENST00000621474 KRT85P78386 507 aa15.93■□□□□ 0.14
CBWD3-217ENST00000621474 NAALADL2Q58DX5 795 aa15.93■□□□□ 0.14
CBWD3-217ENST00000621474 RHPN2Q8IUC4 686 aa15.93■□□□□ 0.14
CBWD3-217ENST00000621474 KCTD17Q8N5Z5 321 aa15.93■□□□□ 0.14
CBWD3-217ENST00000621474 HERVK_113Q902F9 699 aa15.93■□□□□ 0.14
CBWD3-217ENST00000621474 JPH2Q9BR39 696 aaPredicted RBP15.93■□□□□ 0.14
CBWD3-217ENST00000621474 IFT122Q9HBG6 1241 aa15.93■□□□□ 0.14
CBWD3-217ENST00000621474 CIZ1Q9ULV3 898 aaPredicted RBP15.93■□□□□ 0.14
CBWD3-217ENST00000621474 DNM3Q9UQ16 869 aa15.93■□□□□ 0.14
CBWD3-217ENST00000621474 ATP6V1DQ9Y5K8 247 aa15.93■□□□□ 0.14
CBWD3-217ENST00000621474 SQORQ9Y6N5 450 aa15.93■□□□□ 0.14
CBWD3-217ENST00000621474 M0QZ92 97 aa15.92■□□□□ 0.14
CBWD3-217ENST00000621474 FGBP02675 491 aa15.92■□□□□ 0.14
CBWD3-217ENST00000621474 ARL2P36404 184 aa15.92■□□□□ 0.14
CBWD3-217ENST00000621474 CRYBB1P53674 252 aaPredicted RBP15.92■□□□□ 0.14
CBWD3-217ENST00000621474 CNKSR3Q6P9H4 555 aa15.92■□□□□ 0.14
CBWD3-217ENST00000621474 TSHZ1Q6ZSZ6 1077 aa15.92■□□□□ 0.14
CBWD3-217ENST00000621474 EXOC8Q8IYI6 725 aa15.92■□□□□ 0.14
CBWD3-217ENST00000621474 PRPF31Q8WWY3 499 aaKnown RBP15.92■□□□□ 0.14
CBWD3-217ENST00000621474 CCDC43Q96MW1 224 aaKnown RBP15.92■□□□□ 0.14
CBWD3-217ENST00000621474 RUSC1Q9BVN2 902 aa15.92■□□□□ 0.14
CBWD3-217ENST00000621474 IFIH1Q9BYX4 1025 aaKnown RBP15.92■□□□□ 0.14
CBWD3-217ENST00000621474 NOC2LQ9Y3T9 749 aaKnown RBP15.92■□□□□ 0.14
CBWD3-217ENST00000621474 COL4A3BPQ9Y5P4 624 aa15.92■□□□□ 0.14
CBWD3-217ENST00000621474 A0A1W2PPC1 479 aa15.91■□□□□ 0.14
CBWD3-217ENST00000621474 ARHGEF35A5YM69 484 aa15.91■□□□□ 0.14
CBWD3-217ENST00000621474 CUTAO60888 179 aa15.91■□□□□ 0.14
CBWD3-217ENST00000621474 CYP11B2P19099 503 aa15.91■□□□□ 0.14
CBWD3-217ENST00000621474 CD52P31358 61 aa15.91■□□□□ 0.14
CBWD3-217ENST00000621474 DNM2P50570 870 aa15.91■□□□□ 0.14
CBWD3-217ENST00000621474 RINT1Q6NUQ1 792 aa15.91■□□□□ 0.14
CBWD3-217ENST00000621474 C1orf186Q6ZWK4 172 aa15.91■□□□□ 0.14
CBWD3-217ENST00000621474 MAEAQ7L5Y9 396 aa15.91■□□□□ 0.14
CBWD3-217ENST00000621474 FAM228AQ86W67 206 aa15.91■□□□□ 0.14
CBWD3-217ENST00000621474 DAW1Q8N136 415 aa15.91■□□□□ 0.14
CBWD3-217ENST00000621474 SYT2Q8N9I0 419 aaPredicted RBP15.91■□□□□ 0.14
CBWD3-217ENST00000621474 ASAP3Q8TDY4 903 aa15.91■□□□□ 0.14
CBWD3-217ENST00000621474 PSPC1Q8WXF1 523 aaKnown RBP15.91■□□□□ 0.14
CBWD3-217ENST00000621474 CALML4Q96GE6 196 aa15.91■□□□□ 0.14
CBWD3-217ENST00000621474 GDPD2Q9HCC8 539 aa15.91■□□□□ 0.14
CBWD3-217ENST00000621474 POLD4Q9HCU8 107 aa15.91■□□□□ 0.14
CBWD3-217ENST00000621474 A0A087WZ62 844 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 NCLP19338 710 aaKnown RBP15.9■□□□□ 0.14
CBWD3-217ENST00000621474 GLRA2P23416 452 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 LAMTOR4Q0VGL1 99 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 USP38Q8NB14 1042 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 MCPH1Q8NEM0 835 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 TCP11Q8WWU5 503 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 BSNDQ8WZ55 320 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 CDK5RAP3Q96JB5 506 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 SPATA32Q96LK8 384 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 NLRP4Q96MN2 994 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 FDXACB1Q9BRP7 624 aaPredicted RBP15.9■□□□□ 0.14
CBWD3-217ENST00000621474 PADI3Q9ULW8 664 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 TTC3P53804 2025 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 CSDE1O75534 798 aaKnown RBP15.9■□□□□ 0.14
CBWD3-217ENST00000621474 PLA2G4BP0C869 781 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 DARSP14868 501 aaKnown RBP15.9■□□□□ 0.14
CBWD3-217ENST00000621474 EIF4BP23588 611 aaKnown RBP15.9■□□□□ 0.14
CBWD3-217ENST00000621474 ME1P48163 572 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 MAPK7Q13164 816 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 CAPSQ13938 189 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 ARSHQ5FYA8 562 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 FAM109BQ6ICB4 259 aaPredicted RBP15.9■□□□□ 0.14
CBWD3-217ENST00000621474 ZNF410Q86VK4 478 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 ZNF710Q8N1W2 664 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 NLRP7Q8WX94 980 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 LINC01599Q8WXQ3 324 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 RAD54LQ92698 747 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 RNPC3Q96LT9 517 aaKnown RBP15.9■□□□□ 0.14
CBWD3-217ENST00000621474 POLR3FQ9H1D9 316 aaPredicted RBP15.9■□□□□ 0.14
CBWD3-217ENST00000621474 TMX1Q9H3N1 280 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 MINDY3Q9H8M7 445 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 ERVK-5Q9HDB9 667 aa15.9■□□□□ 0.14
CBWD3-217ENST00000621474 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.89■□□□□ 0.13
CBWD3-217ENST00000621474 BAIAP3O94812 1187 aa15.89■□□□□ 0.13
CBWD3-217ENST00000621474 WDR5P61964 334 aaKnown RBP15.89■□□□□ 0.13
CBWD3-217ENST00000621474 MCM6Q14566 821 aa15.89■□□□□ 0.13
CBWD3-217ENST00000621474 E2F4Q16254 413 aa15.89■□□□□ 0.13
CBWD3-217ENST00000621474 RESP18Q5W5W9 173 aa15.89■□□□□ 0.13
CBWD3-217ENST00000621474 LARP4BQ92615 738 aaKnown RBP15.89■□□□□ 0.13
CBWD3-217ENST00000621474 IPO9Q96P70 1041 aaKnown RBP15.89■□□□□ 0.13
CBWD3-217ENST00000621474 SCAND2PQ9GZW5 306 aaPredicted RBP15.89■□□□□ 0.13
CBWD3-217ENST00000621474 ST3GAL5Q9UNP4 418 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms