RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 MAGEL2Q9UJ55 1249 aa7.36□□□□□ -1.23
VPS29-212ENST00000621131 PTX3P26022 381 aaPredicted RBP7.35□□□□□ -1.23
VPS29-212ENST00000621131 FLT3P36888 993 aa7.35□□□□□ -1.23
VPS29-212ENST00000621131 ACVRL1P37023 503 aa7.35□□□□□ -1.23
VPS29-212ENST00000621131 ROM1Q03395 351 aa7.35□□□□□ -1.23
VPS29-212ENST00000621131 ADAM15Q13444 863 aa7.35□□□□□ -1.23
VPS29-212ENST00000621131 CREB3L3Q68CJ9 461 aa7.35□□□□□ -1.23
VPS29-212ENST00000621131 SYNPOQ8N3V7 929 aa7.35□□□□□ -1.23
VPS29-212ENST00000621131 ORAI3Q9BRQ5 295 aa7.35□□□□□ -1.23
VPS29-212ENST00000621131 SCAND2PQ9GZW5 306 aaPredicted RBP7.35□□□□□ -1.23
VPS29-212ENST00000621131 SAE1Q9UBE0 346 aaPredicted RBP7.35□□□□□ -1.23
VPS29-212ENST00000621131 FAM184BQ9ULE4 1060 aa7.35□□□□□ -1.23
VPS29-212ENST00000621131 H7C1D1 291 aa7.34□□□□□ -1.23
VPS29-212ENST00000621131 SLC26A4O43511 780 aa7.34□□□□□ -1.23
VPS29-212ENST00000621131 RANGAP1P46060 587 aaPredicted RBP7.34□□□□□ -1.23
VPS29-212ENST00000621131 FOXE3Q13461 319 aa7.34□□□□□ -1.23
VPS29-212ENST00000621131 ZNF174Q15697 407 aa7.34□□□□□ -1.23
VPS29-212ENST00000621131 CFAP100Q494V2 611 aa7.34□□□□□ -1.23
VPS29-212ENST00000621131 TTC38Q5R3I4 469 aa7.34□□□□□ -1.23
VPS29-212ENST00000621131 KLHDC10Q6PID8 442 aa7.34□□□□□ -1.23
VPS29-212ENST00000621131 EXTL1Q92935 676 aa7.34□□□□□ -1.23
VPS29-212ENST00000621131 INTS7Q9NVH2 962 aaKnown RBP7.34□□□□□ -1.23
VPS29-212ENST00000621131 MAGEC2Q9UBF1 373 aaPredicted RBP7.34□□□□□ -1.23
VPS29-212ENST00000621131 UBA6A0AVT1 1052 aaPredicted RBP7.33□□□□□ -1.24
VPS29-212ENST00000621131 FAM83GA6ND36 823 aa7.33□□□□□ -1.24
VPS29-212ENST00000621131 SLC9A1P19634 815 aa7.33□□□□□ -1.24
VPS29-212ENST00000621131 MSX2P35548 267 aaPredicted RBP7.33□□□□□ -1.24
VPS29-212ENST00000621131 ADCY7P51828 1080 aa7.33□□□□□ -1.24
VPS29-212ENST00000621131 GRM7Q14831 915 aa7.33□□□□□ -1.24
VPS29-212ENST00000621131 EPHA7Q15375 998 aa7.33□□□□□ -1.24
VPS29-212ENST00000621131 USP39Q53GS9 565 aaKnown RBP7.33□□□□□ -1.24
VPS29-212ENST00000621131 SHCBP1Q8NEM2 672 aa7.33□□□□□ -1.24
VPS29-212ENST00000621131 RABGGTAQ92696 567 aa7.33□□□□□ -1.24
VPS29-212ENST00000621131 LPPQ93052 612 aa7.33□□□□□ -1.24
VPS29-212ENST00000621131 NKD2Q969F2 451 aaPredicted RBP7.33□□□□□ -1.24
VPS29-212ENST00000621131 ZNF503Q96F45 646 aa7.33□□□□□ -1.24
VPS29-212ENST00000621131 FAM89AQ96GI7 184 aa7.33□□□□□ -1.24
VPS29-212ENST00000621131 ELF4Q99607 663 aaPredicted RBP7.33□□□□□ -1.24
VPS29-212ENST00000621131 PCIF1Q9H4Z3 704 aa7.33□□□□□ -1.24
VPS29-212ENST00000621131 C2orf78A6NCI8 922 aa7.32□□□□□ -1.24
VPS29-212ENST00000621131 H2AFYO75367 372 aaKnown RBP7.32□□□□□ -1.24
VPS29-212ENST00000621131 SESN2P58004 480 aaPredicted RBP7.32□□□□□ -1.24
VPS29-212ENST00000621131 ATP2C1P98194 919 aaPredicted RBP7.32□□□□□ -1.24
VPS29-212ENST00000621131 ACAP1Q15027 740 aa7.32□□□□□ -1.24
VPS29-212ENST00000621131 DGKDQ16760 1214 aa7.32□□□□□ -1.24
VPS29-212ENST00000621131 SLFN12LQ6IEE8 588 aa7.32□□□□□ -1.24
VPS29-212ENST00000621131 RNF207Q6ZRF8 634 aa7.32□□□□□ -1.24
VPS29-212ENST00000621131 NME9Q86XW9 330 aa7.32□□□□□ -1.24
VPS29-212ENST00000621131 ZNF808Q8N4W9 903 aaPredicted RBP7.32□□□□□ -1.24
VPS29-212ENST00000621131 TUBGCP5Q96RT8 1024 aa7.32□□□□□ -1.24
VPS29-212ENST00000621131 DENND2AQ9ULE3 1009 aa7.32□□□□□ -1.24
VPS29-212ENST00000621131 SPO11Q9Y5K1 396 aa7.32□□□□□ -1.24
VPS29-212ENST00000621131 ARAP1Q96P48 1450 aa7.31□□□□□ -1.24
VPS29-212ENST00000621131 FZD7O75084 574 aa7.31□□□□□ -1.24
VPS29-212ENST00000621131 GDF5P43026 501 aa7.31□□□□□ -1.24
VPS29-212ENST00000621131 SAFB2Q14151 953 aaKnown RBP eCLIP7.31□□□□□ -1.24
VPS29-212ENST00000621131 MYBPC3Q14896 1274 aa7.31□□□□□ -1.24
VPS29-212ENST00000621131 TCEA2Q15560 299 aa7.31□□□□□ -1.24
VPS29-212ENST00000621131 C21orf62-AS1Q17RA5 79 aa7.31□□□□□ -1.24
VPS29-212ENST00000621131 MIIPQ5JXC2 388 aa7.31□□□□□ -1.24
VPS29-212ENST00000621131 ESRP1Q6NXG1 681 aaKnown RBP7.31□□□□□ -1.24
VPS29-212ENST00000621131 KIF18BQ86Y91 864 aa7.31□□□□□ -1.24
VPS29-212ENST00000621131 OR5AN1Q8NGI8 311 aa7.31□□□□□ -1.24
VPS29-212ENST00000621131 GFM2Q969S9 779 aaKnown RBP7.31□□□□□ -1.24
VPS29-212ENST00000621131 MTFR1LQ9H019 292 aa7.31□□□□□ -1.24
VPS29-212ENST00000621131 SLC6A15Q9H2J7 730 aa7.31□□□□□ -1.24
VPS29-212ENST00000621131 OXSMQ9NWU1 459 aa7.31□□□□□ -1.24
VPS29-212ENST00000621131 KCMF1Q9P0J7 381 aa7.31□□□□□ -1.24
VPS29-212ENST00000621131 SRRDQ9UH36 339 aa7.31□□□□□ -1.24
VPS29-212ENST00000621131 CD2APQ9Y5K6 639 aa7.31□□□□□ -1.24
VPS29-212ENST00000621131 ATP2A2P16615 1042 aaKnown RBP7.3□□□□□ -1.24
VPS29-212ENST00000621131 POU3F2P20265 443 aaPredicted RBP7.3□□□□□ -1.24
VPS29-212ENST00000621131 STAT3P40763 770 aa7.3□□□□□ -1.24
VPS29-212ENST00000621131 ADAM8P78325 824 aa7.3□□□□□ -1.24
VPS29-212ENST00000621131 ADCY1Q08828 1119 aa7.3□□□□□ -1.24
VPS29-212ENST00000621131 RIN1Q13671 783 aa7.3□□□□□ -1.24
VPS29-212ENST00000621131 NRN1LQ496H8 165 aa7.3□□□□□ -1.24
VPS29-212ENST00000621131 KANSL1Q7Z3B3 1105 aa7.3□□□□□ -1.24
VPS29-212ENST00000621131 ADGRE4PQ86SQ3 457 aa7.3□□□□□ -1.24
VPS29-212ENST00000621131 HOMER1Q86YM7 354 aa7.3□□□□□ -1.24
VPS29-212ENST00000621131 SORCS2Q96PQ0 1159 aa7.3□□□□□ -1.24
VPS29-212ENST00000621131 HAPLN2Q9GZV7 340 aa7.3□□□□□ -1.24
VPS29-212ENST00000621131 PRDM2Q13029 1718 aa7.3□□□□□ -1.24
VPS29-212ENST00000621131 CYR61O00622 381 aa7.29□□□□□ -1.24
VPS29-212ENST00000621131 TKFCQ3LXA3 575 aa7.29□□□□□ -1.24
VPS29-212ENST00000621131 PRAMEF9Q5VWM5 478 aa7.29□□□□□ -1.24
VPS29-212ENST00000621131 SPTY2D1Q68D10 685 aaPredicted RBP7.29□□□□□ -1.24
VPS29-212ENST00000621131 IL17DQ8TAD2 202 aa7.29□□□□□ -1.24
VPS29-212ENST00000621131 SLC7A6OSQ96CW6 309 aaPredicted RBP7.29□□□□□ -1.24
VPS29-212ENST00000621131 TMEM176AQ96HP8 235 aa7.29□□□□□ -1.24
VPS29-212ENST00000621131 GPHA2Q96T91 129 aa7.29□□□□□ -1.24
VPS29-212ENST00000621131 TLR9Q9NR96 1032 aa7.29□□□□□ -1.24
VPS29-212ENST00000621131 H2AFY2Q9P0M6 372 aaPredicted RBP7.29□□□□□ -1.24
VPS29-212ENST00000621131 F2P00734 622 aa7.28□□□□□ -1.24
VPS29-212ENST00000621131 SLPIP03973 132 aa7.28□□□□□ -1.24
VPS29-212ENST00000621131 ACRV1P26436 265 aa7.28□□□□□ -1.24
VPS29-212ENST00000621131 HIBADHP31937 336 aaKnown RBP7.28□□□□□ -1.24
VPS29-212ENST00000621131 BCAR1P56945 870 aa7.28□□□□□ -1.24
VPS29-212ENST00000621131 C16orf86Q6ZW13 317 aa7.28□□□□□ -1.24
VPS29-212ENST00000621131 BMP8AQ7Z5Y6 402 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms