RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 DKC1O60832 514 aaKnown RBP eCLIP17.54■□□□□ 0.4
LINC00221-202ENST00000619530 CSDE1O75534 798 aaKnown RBP17.54■□□□□ 0.4
LINC00221-202ENST00000619530 MCM7P33993 719 aa17.54■□□□□ 0.4
LINC00221-202ENST00000619530 SARSP49591 514 aaKnown RBP17.54■□□□□ 0.4
LINC00221-202ENST00000619530 MRPS5P82675 430 aaKnown RBP17.54■□□□□ 0.4
LINC00221-202ENST00000619530 TFF2Q03403 129 aa17.54■□□□□ 0.4
LINC00221-202ENST00000619530 GNL2Q13823 731 aaKnown RBP17.54■□□□□ 0.4
LINC00221-202ENST00000619530 ATXN2LQ8WWM7 1075 aaKnown RBP17.54■□□□□ 0.4
LINC00221-202ENST00000619530 ZNF689Q96CS4 500 aaPredicted RBP17.54■□□□□ 0.4
LINC00221-202ENST00000619530 CEP170P1Q96L14 293 aa17.54■□□□□ 0.4
LINC00221-202ENST00000619530 GBP4Q96PP9 640 aa17.54■□□□□ 0.4
LINC00221-202ENST00000619530 CEP89Q96ST8 783 aa17.54■□□□□ 0.4
LINC00221-202ENST00000619530 CYP26B1Q9NR63 512 aa17.54■□□□□ 0.4
LINC00221-202ENST00000619530 LMCD1Q9NZU5 365 aa17.54■□□□□ 0.4
LINC00221-202ENST00000619530 H3BNC9 293 aa17.53■□□□□ 0.4
LINC00221-202ENST00000619530 ZBTB39O15060 712 aa17.53■□□□□ 0.4
LINC00221-202ENST00000619530 NEMFO60524 1076 aa17.53■□□□□ 0.4
LINC00221-202ENST00000619530 MAFO75444 373 aaPredicted RBP17.53■□□□□ 0.4
LINC00221-202ENST00000619530 EIF4BP23588 611 aaKnown RBP17.53■□□□□ 0.4
LINC00221-202ENST00000619530 BMPR1AP36894 532 aa17.53■□□□□ 0.4
LINC00221-202ENST00000619530 HMGN5P82970 282 aaKnown RBP17.53■□□□□ 0.4
LINC00221-202ENST00000619530 ZNF174Q15697 407 aa17.53■□□□□ 0.4
LINC00221-202ENST00000619530 SLC24A5Q71RS6 500 aa17.53■□□□□ 0.4
LINC00221-202ENST00000619530 RHPN2Q8IUC4 686 aa17.53■□□□□ 0.4
LINC00221-202ENST00000619530 KSR1Q8IVT5 923 aa17.53■□□□□ 0.4
LINC00221-202ENST00000619530 ASB2Q96Q27 587 aa17.53■□□□□ 0.4
LINC00221-202ENST00000619530 LXNQ9BS40 222 aa17.53■□□□□ 0.4
LINC00221-202ENST00000619530 TTC12Q9H892 705 aaPredicted RBP17.53■□□□□ 0.4
LINC00221-202ENST00000619530 C1orf112Q9NSG2 853 aa17.53■□□□□ 0.4
LINC00221-202ENST00000619530 BMP2KQ9NSY1 1161 aaPredicted RBP17.53■□□□□ 0.4
LINC00221-202ENST00000619530 MRPL42Q9Y6G3 142 aaKnown RBP17.53■□□□□ 0.4
LINC00221-202ENST00000619530 NLRC5Q86WI3 1866 aa17.53■□□□□ 0.4
LINC00221-202ENST00000619530 CSPG5O95196 566 aa17.52■□□□□ 0.4
LINC00221-202ENST00000619530 ZSCAN20P17040 1043 aaPredicted RBP17.52■□□□□ 0.4
LINC00221-202ENST00000619530 PTMSP20962 102 aa17.52■□□□□ 0.4
LINC00221-202ENST00000619530 SPIRE1Q08AE8 756 aa17.52■□□□□ 0.4
LINC00221-202ENST00000619530 PTPROQ16827 1216 aa17.52■□□□□ 0.4
LINC00221-202ENST00000619530 XKR9Q5GH70 373 aa17.52■□□□□ 0.4
LINC00221-202ENST00000619530 TJAP1Q5JTD0 557 aa17.52■□□□□ 0.4
LINC00221-202ENST00000619530 OTUD6AQ7L8S5 288 aa17.52■□□□□ 0.4
LINC00221-202ENST00000619530 CRIPAKQ8N1N5 446 aa17.52■□□□□ 0.4
LINC00221-202ENST00000619530 ZNF710Q8N1W2 664 aa17.52■□□□□ 0.4
LINC00221-202ENST00000619530 IL27Q8NEV9 243 aa17.52■□□□□ 0.4
LINC00221-202ENST00000619530 EIF2AK1Q9BQI3 630 aaKnown RBP17.52■□□□□ 0.4
LINC00221-202ENST00000619530 GCOM2Q9BZD3 368 aaPredicted RBP17.52■□□□□ 0.4
LINC00221-202ENST00000619530 ZSWIM4Q9H7M6 989 aa17.52■□□□□ 0.4
LINC00221-202ENST00000619530 A0A087WWV3 80 aa17.51■□□□□ 0.39
LINC00221-202ENST00000619530 A0A087WZ62 844 aa17.51■□□□□ 0.39
LINC00221-202ENST00000619530 TBKBP1A7MCY6 615 aa17.51■□□□□ 0.39
LINC00221-202ENST00000619530 C9IYK1 514 aa17.51■□□□□ 0.39
LINC00221-202ENST00000619530 SLITRK3O94933 977 aa17.51■□□□□ 0.39
LINC00221-202ENST00000619530 DARSP14868 501 aaKnown RBP17.51■□□□□ 0.39
LINC00221-202ENST00000619530 YWHABP31946 246 aaKnown RBP17.51■□□□□ 0.39
LINC00221-202ENST00000619530 MCM2P49736 904 aa17.51■□□□□ 0.39
LINC00221-202ENST00000619530 POLGP54098 1239 aaPredicted RBP17.51■□□□□ 0.39
LINC00221-202ENST00000619530 SPOUT1Q5T280 376 aaKnown RBP17.51■□□□□ 0.39
LINC00221-202ENST00000619530 FAM102BQ5T8I3 360 aa17.51■□□□□ 0.39
LINC00221-202ENST00000619530 CMTR2Q8IYT2 770 aaKnown RBP17.51■□□□□ 0.39
LINC00221-202ENST00000619530 RNF169Q8NCN4 708 aa17.51■□□□□ 0.39
LINC00221-202ENST00000619530 FBXO18Q8NFZ0 1043 aa17.51■□□□□ 0.39
LINC00221-202ENST00000619530 HLA-CQ95604 372 aa17.51■□□□□ 0.39
LINC00221-202ENST00000619530 TMEM143Q96AN5 459 aa17.51■□□□□ 0.39
LINC00221-202ENST00000619530 MRPL38Q96DV4 380 aaKnown RBP17.51■□□□□ 0.39
LINC00221-202ENST00000619530 NLRP4Q96MN2 994 aa17.51■□□□□ 0.39
LINC00221-202ENST00000619530 FDXACB1Q9BRP7 624 aaPredicted RBP17.51■□□□□ 0.39
LINC00221-202ENST00000619530 TMEM60Q9H2L4 133 aa17.51■□□□□ 0.39
LINC00221-202ENST00000619530 RC3H2Q9HBD1 1191 aaKnown RBP17.51■□□□□ 0.39
LINC00221-202ENST00000619530 ATP6V0A4Q9HBG4 840 aa17.51■□□□□ 0.39
LINC00221-202ENST00000619530 REV3LO60673 3130 aa17.51■□□□□ 0.39
LINC00221-202ENST00000619530 IGKV6-21A0A0C4DH24 114 aa17.5■□□□□ 0.39
LINC00221-202ENST00000619530 FGFR1P11362 822 aa17.5■□□□□ 0.39
LINC00221-202ENST00000619530 CDC42EP1Q00587 391 aa17.5■□□□□ 0.39
LINC00221-202ENST00000619530 DSC3Q14574 896 aa17.5■□□□□ 0.39
LINC00221-202ENST00000619530 C4orf19Q8IY42 314 aa17.5■□□□□ 0.39
LINC00221-202ENST00000619530 SLC7A3Q8WY07 619 aa17.5■□□□□ 0.39
LINC00221-202ENST00000619530 SYMPKQ92797 1274 aaKnown RBP17.5■□□□□ 0.39
LINC00221-202ENST00000619530 MTMR9Q96QG7 549 aa17.5■□□□□ 0.39
LINC00221-202ENST00000619530 JPH2Q9BR39 696 aaPredicted RBP17.5■□□□□ 0.39
LINC00221-202ENST00000619530 FOXP1Q9H334 677 aaPredicted RBP17.5■□□□□ 0.39
LINC00221-202ENST00000619530 RNF216Q9NWF9 866 aaPredicted RBP17.5■□□□□ 0.39
LINC00221-202ENST00000619530 RWDD3Q9Y3V2 267 aa17.5■□□□□ 0.39
LINC00221-202ENST00000619530 GRM6O15303 877 aa17.5■□□□□ 0.39
LINC00221-202ENST00000619530 RB1P06400 928 aa17.5■□□□□ 0.39
LINC00221-202ENST00000619530 SRGAP2CP0DJJ0 459 aa17.5■□□□□ 0.39
LINC00221-202ENST00000619530 FAM189BP81408 668 aa17.5■□□□□ 0.39
LINC00221-202ENST00000619530 PRPF31Q8WWY3 499 aaKnown RBP17.5■□□□□ 0.39
LINC00221-202ENST00000619530 CLP1Q92989 425 aaKnown RBP17.5■□□□□ 0.39
LINC00221-202ENST00000619530 C11orf84Q9BUA3 381 aaPredicted RBP17.5■□□□□ 0.39
LINC00221-202ENST00000619530 ALG13Q9NP73 1137 aaKnown RBP17.5■□□□□ 0.39
LINC00221-202ENST00000619530 CUL9Q8IWT3 2517 aa17.49■□□□□ 0.39
LINC00221-202ENST00000619530 LINC00271P0C7V0 271 aa17.49■□□□□ 0.39
LINC00221-202ENST00000619530 RFC5P40937 340 aa17.49■□□□□ 0.39
LINC00221-202ENST00000619530 KCNQ1P51787 676 aa17.49■□□□□ 0.39
LINC00221-202ENST00000619530 FAM43BQ6ZT52 329 aaPredicted RBP17.49■□□□□ 0.39
LINC00221-202ENST00000619530 TMEM161AQ9NX61 479 aa17.49■□□□□ 0.39
LINC00221-202ENST00000619530 COG5Q9UP83 839 aa17.49■□□□□ 0.39
LINC00221-202ENST00000619530 MYO7AQ13402 2215 aa17.49■□□□□ 0.39
LINC00221-202ENST00000619530 TCF20Q9UGU0 1960 aaKnown RBP17.48■□□□□ 0.39
LINC00221-202ENST00000619530 RALGAPA2Q2PPJ7 1873 aa17.48■□□□□ 0.39
LINC00221-202ENST00000619530 POTEMA6NI47 508 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms