RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 CACNB2Q08289 660 aaPredicted RBP5.63□□□□□ -1.51
SEM1-220ENST00000619259 ITKQ08881 620 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 BROXQ5VW32 411 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 TMC5Q6UXY8 1006 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 STK32CQ86UX6 486 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 MIB1Q86YT6 1006 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 RPUSD2Q8IZ73 545 aaKnown RBP5.63□□□□□ -1.51
SEM1-220ENST00000619259 NGEFQ8N5V2 710 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 FBXO15Q8NCQ5 510 aaPredicted RBP5.63□□□□□ -1.51
SEM1-220ENST00000619259 SLC5A5Q92911 643 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 GBP4Q96PP9 640 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 CEP89Q96ST8 783 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 CNTD2Q9H8S5 307 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 NGRNQ9NPE2 291 aaKnown RBP5.63□□□□□ -1.51
SEM1-220ENST00000619259 MBD1Q9UIS9 605 aaPredicted RBP5.63□□□□□ -1.51
SEM1-220ENST00000619259 NOC2LQ9Y3T9 749 aaKnown RBP5.63□□□□□ -1.51
SEM1-220ENST00000619259 NSD2O96028 1365 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 A2ML1A8K2U0 1454 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 QRICH2Q9H0J4 1663 aa5.63□□□□□ -1.51
SEM1-220ENST00000619259 TEX51A0A1B0GUA7 166 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 PRAMEF22A3QJZ6 481 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 TGM5O43548 720 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 KATNA1O75449 491 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 CYP2C8P10632 490 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 PPP2R1AP30153 589 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 LSP1P33241 339 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 CDR1P51861 262 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 CR1LQ2VPA4 569 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 PRAMEF18Q5VWM3 479 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 CREB3L3Q68CJ9 461 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 VASNQ6EMK4 673 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 SMARCC2Q8TAQ2 1214 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 MZB1Q8WU39 189 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 MTMR8Q96EF0 704 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 RNF38Q9H0F5 515 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 SLC39A2Q9NP94 309 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 UCKL1Q9NWZ5 548 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 DDX56Q9NY93 547 aaKnown RBP5.62□□□□□ -1.51
SEM1-220ENST00000619259 RBPJLQ9UBG7 517 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 POLR3AO14802 1390 aaPredicted RBP5.62□□□□□ -1.51
SEM1-220ENST00000619259 PTPRMP28827 1452 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 TULP4Q9NRJ4 1543 aa5.62□□□□□ -1.51
SEM1-220ENST00000619259 CLTCQ00610 1675 aaKnown RBP5.62□□□□□ -1.51
SEM1-220ENST00000619259 MED14O60244 1454 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 APOL3O95236 402 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 ENO2P09104 434 aaPredicted RBP5.61□□□□□ -1.51
SEM1-220ENST00000619259 CD40P25942 277 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 SDHAP31040 664 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 EPHB3P54753 998 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 SESN3P58005 492 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 HERVK_113P62684 666 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 DBPQ10586 325 aaPredicted RBP5.61□□□□□ -1.51
SEM1-220ENST00000619259 CATSPEREQ5SY80 951 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 CD276Q5ZPR3 534 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 ZZZ3Q8IYH5 903 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 ANKRD36BQ8N2N9 1353 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 CNTD1Q8N815 330 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 WDR48Q8TAF3 677 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 ASB15Q8WXK1 588 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 RTF1Q92541 710 aaKnown RBP5.61□□□□□ -1.51
SEM1-220ENST00000619259 ZNF521Q96K83 1311 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 TUBGCP5Q96RT8 1024 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 SMAD5Q99717 465 aaKnown RBP5.61□□□□□ -1.51
SEM1-220ENST00000619259 SYT3Q9BQG1 590 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 PCDHA5Q9Y5H7 936 aa5.61□□□□□ -1.51
SEM1-220ENST00000619259 CFAP65Q6ZU64 1925 aaKnown RBP5.6□□□□□ -1.51
SEM1-220ENST00000619259 SETD1AO15047 1707 aaKnown RBP5.6□□□□□ -1.51
SEM1-220ENST00000619259 ALKQ9UM73 1620 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 TECPR2O15040 1411 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 YTHDC2Q9H6S0 1430 aaKnown RBP5.6□□□□□ -1.51
SEM1-220ENST00000619259 EVC2Q86UK5 1308 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 RASSF10A6NK89 507 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 N4BP3O15049 544 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 SEMA7AO75326 666 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 PRKD3O94806 890 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 C8BP07358 591 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 TMEM253P0C7T8 217 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 ATF2P15336 505 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 GLRBP48167 497 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 FNTBP49356 437 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 SMAD3P84022 425 aaKnown RBP5.6□□□□□ -1.51
SEM1-220ENST00000619259 FOXO4P98177 505 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 PFKPQ01813 784 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 TERF2Q15554 542 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 SMAD2Q15796 467 aaKnown RBP5.6□□□□□ -1.51
SEM1-220ENST00000619259 BRDTQ58F21 947 aaPredicted RBP5.6□□□□□ -1.51
SEM1-220ENST00000619259 CC2D1BQ5T0F9 858 aaKnown RBP5.6□□□□□ -1.51
SEM1-220ENST00000619259 PHF19Q5T6S3 580 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 MCTP1Q6DN14 999 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 SYDE1Q6ZW31 735 aaPredicted RBP5.6□□□□□ -1.51
SEM1-220ENST00000619259 NECAB2Q7Z6G3 386 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 CPA5Q8WXQ8 436 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 ZSWIM3Q96MP5 696 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 PUS7LQ9H0K6 701 aaKnown RBP5.6□□□□□ -1.51
SEM1-220ENST00000619259 MS4A5Q9H3V2 200 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 KCNG1Q9UIX4 513 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 MSRAQ9UJ68 235 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 MYO5BQ9ULV0 1848 aa5.6□□□□□ -1.51
SEM1-220ENST00000619259 ABCC11Q96J66 1382 aa5.59□□□□□ -1.51
SEM1-220ENST00000619259 IRS2Q9Y4H2 1338 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms