RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 TMEM87BQ96K49 555 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 SENP7Q9BQF6 1050 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 GOLGA8RI6L899 631 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 SHBGP04278 402 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 MTHFD1LQ6UB35 978 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 CSGALNACT2Q8N6G5 542 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 HEMGNQ9BXL5 484 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 YIPF3Q9GZM5 350 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 MAP3K5Q99683 1374 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 UQCRFS1P1P0C7P4 283 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 IMPDH2P12268 514 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 MAP3K10Q02779 954 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 TTMPQ5BVD1 217 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 PPP2R3CQ969Q6 453 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 NSL1Q96IY1 281 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 PNMA3Q9UL41 463 aa3.3□□□□□ -1.88
NEB-220ENST00000618972 APOA5Q6Q788 366 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 NOC4LQ9BVI4 516 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 PKD2L2Q9NZM6 624 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 PEX14O75381 377 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 SMAD1Q15797 465 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 CRNKL1Q9BZJ0 848 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 ANLNQ9NQW6 1124 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 CPA3P15088 417 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 STAT2P52630 851 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 KCNMA1Q12791 1236 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 TAF11Q15544 211 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 AOC3Q16853 763 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 ANKLE2Q86XL3 938 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 ZNF579Q8NAF0 562 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 ZNF507Q8TCN5 953 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 HSPA13P48723 471 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 VPS41P49754 854 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 C2CD6Q53TS8 623 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 TTC1Q99614 292 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 C1orf50Q9BV19 199 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 SORCS3Q9UPU3 1222 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 ATRXP46100 2492 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 EEF1DP29692 281 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 GRSF1Q12849 480 aaKnown RBP eCLIP3.29□□□□□ -1.88
NEB-220ENST00000618972 IFNAR2P48551 515 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 CENPTQ96BT3 561 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 ZNF668Q96K58 619 aaPredicted RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 RAP1GAPP47736 663 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 CENPUQ71F23 418 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 NKX1-2Q9UD57 310 aaPredicted RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 APPL1Q9UKG1 709 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 PNMA2Q9UL42 364 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 PCDHB13Q9Y5F0 798 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 ANKRD36BQ8N2N9 1353 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 CCDC188H7C350 402 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 DEAF1O75398 565 aaPredicted RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 CSF1RP07333 972 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 GNPTABQ3T906 1256 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 TBC1D1Q86TI0 1168 aaPredicted RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 ZNF654Q8IZM8 581 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 CCDC78A2IDD5 438 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 ABCB1P08183 1280 aaPredicted RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 PURAQ00577 322 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 LRRC8CQ8TDW0 803 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 UBLCP1Q8WVY7 318 aaPredicted RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 KATNAL1Q9BW62 490 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 UNC45AQ9H3U1 944 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 GIT1Q9Y2X7 761 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 ASAP2O43150 1006 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 CALUO43852 315 aaPredicted RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 PEX10O60683 326 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 PPP2R5CQ13362 524 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 LRRC36Q1X8D7 754 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 KRT80Q6KB66 452 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 INTS5Q6P9B9 1019 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 SPATA5Q8NB90 893 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 PSMA8Q8TAA3 256 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 OLFM1Q99784 485 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 C8orf4Q9NR00 106 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 IL17RBQ9NRM6 502 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 TAS2R14Q9NYV8 317 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 GOLGA8MH3BSY2 632 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 TSC22D2O75157 780 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 TBCAO75347 108 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 MRPL28Q13084 256 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 TRIM15Q9C019 465 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 NEUROG2Q9H2A3 272 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 PARVGQ9HBI0 331 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 BAZ2BQ9UIF8 2168 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 TCRBV5S4A2TA0A5A2 114 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 GYPCP04921 128 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 KRT2P35908 639 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 SLC1A4P43007 532 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 ZSCAN10Q96SZ4 725 aaPredicted RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 LEMD3Q9Y2U8 911 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 F8W8V4 182 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 ANGPT2O15123 496 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 MTRF1O75570 445 aaKnown RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 PLCG1P19174 1290 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 PHEXP78562 749 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 AASDHQ4L235 1098 aaPredicted RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 HIBCHQ6NVY1 386 aaPredicted RBP3.29□□□□□ -1.88
NEB-220ENST00000618972 ISCA1Q9BUE6 129 aa3.29□□□□□ -1.88
NEB-220ENST00000618972 TLR10Q9BXR5 811 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms