RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 CHTOPQ9Y3Y2 248 aaKnown RBP4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 DAGLAQ9Y4D2 1042 aa4.47□□□□□ -1.69
UBE2D3-233ENST00000618836 AFDNP55196 1824 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 NDUFAB1O14561 156 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 APAF1O14727 1248 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 CTNND1O60716 968 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 DKK1O94907 266 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 ALOX15P16050 662 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 CHKAP35790 457 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 SLC12A2P55011 1212 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 IL1RL1Q01638 556 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 SPCS2Q15005 226 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 C4orf48Q5BLP8 95 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 BEND6Q5SZJ8 279 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 PTCRAQ6ISU1 281 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 BNIPLQ7Z465 357 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 PPP1R14CQ8TAE6 165 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 BCAS4Q8TDM0 211 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 PARD3BQ8TEW8 1205 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 OSBP2Q969R2 916 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 FAM122AQ96E09 287 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 C16orf45Q96MC5 204 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 CTAGE1Q96RT6 745 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 CCDC106Q9BWC9 280 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 KIAA1683Q9H0B3 1180 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 CRLF2Q9HC73 371 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 TOPORSQ9NS56 1045 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 NOB1Q9ULX3 412 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 EDARQ9UNE0 448 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 SLC12A8A0AV02 714 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 USP17L5A8MUK1 530 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 CETN3O15182 167 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 TEX28O15482 410 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 FAM13AO94988 1023 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 F12P00748 615 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 BCRP11274 1271 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 DSTNP60981 165 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 NFE2L1Q14494 772 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 ARHGAP22Q7Z5H3 698 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 HOOK3Q86VS8 718 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 SYTL1Q8IYJ3 562 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 COLGALT2Q8IYK4 626 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 SCYL3Q8IZE3 742 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 SPARTQ8N0X7 666 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 CCDC110Q8TBZ0 833 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 SCG3Q8WXD2 468 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 DTNBP1Q96EV8 351 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 TNIP3Q96KP6 325 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 CGREF1Q99674 301 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 NT5C3AQ9H0P0 336 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 BICC1Q9H694 974 aaKnown RBP4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 KLHL11Q9NVR0 708 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 SH3BGRL2Q9UJC5 107 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 CAB39Q9Y376 341 aaPredicted RBP4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 ZNF711Q9Y462 761 aa4.46□□□□□ -1.7
UBE2D3-233ENST00000618836 FAM196BA6NMK8 535 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 BIN1O00499 593 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 CYP27B1O15528 508 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 TREHO43280 583 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 CYTH3O43739 400 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 CYP11A1P05108 521 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 LDHBP07195 334 aaKnown RBP4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 FESP07332 822 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 TFEBP19484 476 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 MX2P20592 715 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 NFIAQ12857 509 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 FAPQ12884 760 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 NR5A1Q13285 461 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 SMAD4Q13485 552 aaKnown RBP4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 CCNG2Q16589 344 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 ZNF792Q3KQV3 632 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 AARDQ4LEZ3 155 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 KCNT1Q5JUK3 1230 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 FAM26DQ5JW98 314 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 CCDC183Q5T5S1 534 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 RETSATQ6NUM9 610 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 XRRA1Q6P2D8 792 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 XKR5Q6UX68 686 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 MFSD6Q6ZSS7 791 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 PLEKHM3Q6ZWE6 761 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 LRRC47Q8N1G4 583 aaKnown RBP4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 LRRC71Q8N4P6 559 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 ZFRQ96KR1 1074 aaKnown RBP4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 FAM167AQ96KS9 214 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 FNBP1Q96RU3 617 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 MKNK1Q9BUB5 465 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 BHMT2Q9H2M3 363 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 NSD2O96028 1365 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 OR5K4A6NMS3 321 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 RSPH10B2B2RC85 870 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 AHCYL1O43865 530 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 PDE8AO60658 829 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 DKC1O60832 514 aaKnown RBP eCLIP4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 MAFO75444 373 aaPredicted RBP4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 TIPRLO75663 272 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 DGKIO75912 1065 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 DDHD2O94830 711 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 RSPH10BP0C881 870 aa4.45□□□□□ -1.7
UBE2D3-233ENST00000618836 EEF2P13639 858 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms