RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 SMPD1P17405 629 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 MCM3P25205 808 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 RPA1P27694 616 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 GUCY2FP51841 1108 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 GUCY2DQ02846 1103 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 KLRC3Q07444 240 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 SLC20A2Q08357 652 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 KLHL30Q0D2K2 578 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 UAP1Q16222 522 aaPredicted RBP4.73□□□□□ -1.65
SEC22B-202ENST00000618538 ASIC2Q16515 512 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 KNOP1Q1ED39 458 aaKnown RBP4.73□□□□□ -1.65
SEC22B-202ENST00000618538 BMT2Q1RMZ1 405 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 Q4G0T1 1027 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 ZC2HC1CQ53FD0 456 aaPredicted RBP4.73□□□□□ -1.65
SEC22B-202ENST00000618538 DACT2Q5SW24 774 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 SLFN13Q68D06 897 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 TATDN1Q6P1N9 297 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 EMBQ6PCB8 327 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 MOXD1Q6UVY6 613 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 LEKR1Q6ZMV7 388 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 PALB2Q86YC2 1186 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 SYT2Q8N9I0 419 aaPredicted RBP4.73□□□□□ -1.65
SEC22B-202ENST00000618538 USP38Q8NB14 1042 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 BANK1Q8NDB2 785 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 FAM76AQ8TAV0 307 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 LNX1Q8TBB1 728 aaPredicted RBP4.73□□□□□ -1.65
SEC22B-202ENST00000618538 TEKT1Q969V4 418 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 ZDHHC15Q96MV8 337 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 SPSB2Q99619 263 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 LRRC27Q9C0I9 530 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 GPR88Q9GZN0 384 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 BHMT2Q9H2M3 363 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 EPB41L5Q9HCM4 733 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 GOLGA6AQ9NYA3 693 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 NYAP2Q9P242 653 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 NAGPAQ9UK23 515 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 STXBP5LQ9Y2K9 1186 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 NR2E1Q9Y466 385 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 AFF2P51816 1311 aa4.73□□□□□ -1.65
SEC22B-202ENST00000618538 BTNL10A8MVZ5 291 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 TOM1O60784 492 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 KIF4AO95239 1232 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 NR3C1P04150 777 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 CFHP08603 1231 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 EPB41P11171 864 aaKnown RBP4.72□□□□□ -1.65
SEC22B-202ENST00000618538 ITGA4P13612 1032 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 NMT1P30419 496 aaKnown RBP4.72□□□□□ -1.65
SEC22B-202ENST00000618538 CIITAP33076 1130 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 FLT3P36888 993 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 PRKCIP41743 596 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 ECE1P42892 770 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 NAP1L1P55209 391 aaKnown RBP4.72□□□□□ -1.65
SEC22B-202ENST00000618538 CORO7P57737 925 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 FOXK2Q01167 660 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 ICA1Q05084 483 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 PDCLQ13371 301 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 CTTNQ14247 550 aaKnown RBP4.72□□□□□ -1.65
SEC22B-202ENST00000618538 SKIDA1Q1XH10 827 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 CCDC181Q5TID7 509 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 DCAF12L1Q5VU92 463 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 KCTD16Q68DU8 428 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 IQCEQ6IPM2 695 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 PADI6Q6TGC4 694 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 DDX42Q86XP3 938 aaKnown RBP eCLIP4.72□□□□□ -1.65
SEC22B-202ENST00000618538 SPICE1Q8N0Z3 855 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 METTL13Q8N6R0 699 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 PIGOQ8TEQ8 1089 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 SCFD2Q8WU76 684 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 DCAF4Q8WV16 495 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 RUBCNQ92622 972 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 CCDC43Q96MW1 224 aaKnown RBP4.72□□□□□ -1.65
SEC22B-202ENST00000618538 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.72□□□□□ -1.65
SEC22B-202ENST00000618538 ZC3H12CQ9C0D7 883 aaKnown RBP4.72□□□□□ -1.65
SEC22B-202ENST00000618538 ACBD3Q9H3P7 528 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 TMEM134Q9H6X4 195 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 PLCB1Q9NQ66 1216 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 ARMCX3Q9UH62 379 aaPredicted RBP4.72□□□□□ -1.65
SEC22B-202ENST00000618538 BCS1LQ9Y276 419 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 VGLL3A8MV65 326 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 TISP43B9A030 160 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 H0YGN5 161 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 PDXKO00764 312 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 KCNK3O14649 394 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 CETN3O15182 167 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 EIF3HO15372 352 aaKnown RBP eCLIP4.72□□□□□ -1.65
SEC22B-202ENST00000618538 MARCH6O60337 910 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 TRIM37O94972 964 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 GNA14O95837 355 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 GH2P01242 217 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 AFPP02771 609 aaKnown RBP4.72□□□□□ -1.65
SEC22B-202ENST00000618538 HLA-DOAP06340 250 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 IVLP07476 585 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 CCT5P48643 541 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 ATP1A2P50993 1020 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 UBXN2AP68543 259 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 SKOR1P84550 965 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 AP3B2Q13367 1082 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 EXOC3L4Q17RC7 722 aa4.72□□□□□ -1.65
SEC22B-202ENST00000618538 CERKLQ49MI3 558 aaPredicted RBP4.72□□□□□ -1.65
SEC22B-202ENST00000618538 CFAP221Q4G0U5 840 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms