RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 RXFP1Q9HBX9 757 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 LARSQ9P2J5 1176 aaKnown RBP13.19□□□□□ -0.3
MATR3-227ENST00000618441 LZTS1Q9Y250 596 aa13.19□□□□□ -0.3
MATR3-227ENST00000618441 LDHAP00338 332 aaKnown RBP13.18□□□□□ -0.3
MATR3-227ENST00000618441 GH1P01241 217 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 FGGP02679 453 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 ACADSP16219 412 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 KCNA2P16389 499 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 CLCN2P51788 898 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 ITIH3Q06033 890 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 CCDC80Q76M96 950 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 ST13P4Q8IZP2 240 aaPredicted RBP13.18□□□□□ -0.3
MATR3-227ENST00000618441 ZHX3Q9H4I2 956 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 R3HDM2Q9Y2K5 976 aaKnown RBP13.18□□□□□ -0.3
MATR3-227ENST00000618441 SRCAPQ6ZRS2 3230 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 ALADP13716 330 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 PRLRP16471 622 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 IL4RP24394 825 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 KLHL30Q0D2K2 578 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 RFWD3Q6PCD5 774 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 SMIM5Q71RC9 77 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 SRRM1Q8IYB3 904 aaKnown RBP13.18□□□□□ -0.3
MATR3-227ENST00000618441 ASAP3Q8TDY4 903 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 VMP1Q96GC9 406 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 ABHD8Q96I13 439 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 PDP2Q9P2J9 529 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 V9GY48 417 aaPredicted RBP13.18□□□□□ -0.3
MATR3-227ENST00000618441 SPDYE16A6NNV3 312 aaPredicted RBP13.18□□□□□ -0.3
MATR3-227ENST00000618441 TNFRSF8P28908 595 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 CAPN12Q6ZSI9 719 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 HIPK4Q8NE63 616 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 SPATA17Q96L03 361 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 RNF14Q9UBS8 474 aa13.18□□□□□ -0.3
MATR3-227ENST00000618441 LRRC10BA6NIK2 292 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 OR6B1O95007 311 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 STAMBPO95630 424 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 CPA2P48052 419 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 NEK3P51956 506 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 DNAJC3Q13217 504 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 ACAP1Q15027 740 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 C6orf183Q5T699 404 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 LRRC8BQ6P9F7 803 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 NKX2-3Q8TAU0 364 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 ATXN2LQ8WWM7 1075 aaKnown RBP13.17□□□□□ -0.3
MATR3-227ENST00000618441 A0A1W2PQC6 194 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 UNC5CO95185 931 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 BRAFP15056 766 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 DMPKQ09013 629 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 SGSM1Q2NKQ1 1148 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 EARS2Q5JPH6 523 aaKnown RBP13.17□□□□□ -0.3
MATR3-227ENST00000618441 PHLDB3Q6NSJ2 640 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 NCCRP1Q6ZVX7 275 aaPredicted RBP13.17□□□□□ -0.3
MATR3-227ENST00000618441 SLF2Q8IX21 1173 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.17□□□□□ -0.3
MATR3-227ENST00000618441 VPS37AQ8NEZ2 397 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 RBMX2Q9Y388 322 aaKnown RBP13.17□□□□□ -0.3
MATR3-227ENST00000618441 SPATA31A3Q5VYP0 1347 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 FAM237AA0A1B0GTK4 181 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 CFAP69A5D8W1 941 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 ADCY3O60266 1144 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 PDE5AO76074 875 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 ITGA2BP08514 1039 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 ATP6V1B1P15313 513 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 PHKG2P15735 406 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 ZFXP17010 805 aaPredicted RBP13.17□□□□□ -0.3
MATR3-227ENST00000618441 ATICP31939 592 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 EIF3BP55884 814 aaKnown RBP13.17□□□□□ -0.3
MATR3-227ENST00000618441 CDR2Q01850 454 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 MEA1Q16626 185 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 IZUMO2Q6UXV1 221 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 TBC1D10CQ8IV04 446 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 LENG1Q96BZ8 264 aaPredicted RBP13.17□□□□□ -0.3
MATR3-227ENST00000618441 TUBGCP5Q96RT8 1024 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 SPATA16Q9BXB7 569 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 KDM6AO15550 1401 aaPredicted RBP13.17□□□□□ -0.3
MATR3-227ENST00000618441 SPAG7O75391 227 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 KPNB1Q14974 876 aaKnown RBP13.17□□□□□ -0.3
MATR3-227ENST00000618441 CCDC174Q6PII3 467 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 STMN4Q9H169 189 aaPredicted RBP13.17□□□□□ -0.3
MATR3-227ENST00000618441 SH3GLB1Q9Y371 365 aa13.17□□□□□ -0.3
MATR3-227ENST00000618441 ANKARQ7Z5J8 1434 aa13.16□□□□□ -0.3
MATR3-227ENST00000618441 MINDY4BA8MYZ0 360 aa13.16□□□□□ -0.3
MATR3-227ENST00000618441 WNT7AO00755 349 aa13.16□□□□□ -0.3
MATR3-227ENST00000618441 PAEPP09466 180 aa13.16□□□□□ -0.3
MATR3-227ENST00000618441 RFX1P22670 979 aa13.16□□□□□ -0.3
MATR3-227ENST00000618441 KRT2P35908 639 aa13.16□□□□□ -0.3
MATR3-227ENST00000618441 SEPT7Q16181 437 aaKnown RBP13.16□□□□□ -0.3
MATR3-227ENST00000618441 UBAP2Q5T6F2 1119 aaKnown RBP13.16□□□□□ -0.3
MATR3-227ENST00000618441 LRRC74BQ6ZQY2 392 aa13.16□□□□□ -0.3
MATR3-227ENST00000618441 ZBTB8BQ8NAP8 495 aaPredicted RBP13.16□□□□□ -0.3
MATR3-227ENST00000618441 FBXO25Q8TCJ0 367 aa13.16□□□□□ -0.3
MATR3-227ENST00000618441 U2AF1L4Q8WU68 220 aaKnown RBP13.16□□□□□ -0.3
MATR3-227ENST00000618441 UTP4Q969X6 686 aaKnown RBP13.16□□□□□ -0.3
MATR3-227ENST00000618441 DCLRE1BQ9H816 532 aa13.16□□□□□ -0.3
MATR3-227ENST00000618441 SUCLA2Q9P2R7 463 aaPredicted RBP13.16□□□□□ -0.3
MATR3-227ENST00000618441 CTNNAL1Q9UBT7 734 aa13.16□□□□□ -0.3
MATR3-227ENST00000618441 BARX2Q9UMQ3 279 aaPredicted RBP13.16□□□□□ -0.3
MATR3-227ENST00000618441 VAV1P15498 845 aa13.16□□□□□ -0.3
MATR3-227ENST00000618441 GNAZP19086 355 aa13.16□□□□□ -0.3
MATR3-227ENST00000618441 ABCB4P21439 1286 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms